RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 IGKV3D-7A0A0C4DH55 119 aa10.7□□□□□ -0.7
RFX1-201ENST00000254325 DIRC1Q969H9 104 aa10.7□□□□□ -0.7
RFX1-201ENST00000254325 ENHOQ6UWT2 76 aa10.7□□□□□ -0.7
RFX1-201ENST00000254325 STAB1Q9NY15 2570 aa10.7□□□□□ -0.7
RFX1-201ENST00000254325 NDUFC2O95298 119 aa10.7□□□□□ -0.7
RFX1-201ENST00000254325 TMEM256-PLSCR3K7ERE1 68 aa10.69□□□□□ -0.7
RFX1-201ENST00000254325 ESRGQ1W209 222 aa10.69□□□□□ -0.7
RFX1-201ENST00000254325 PPDPFQ9H3Y8 114 aa10.69□□□□□ -0.7
RFX1-201ENST00000254325 NBPF19A0A087WUL8 3843 aa10.69□□□□□ -0.7
RFX1-201ENST00000254325 PSCAO43653 123 aa10.69□□□□□ -0.7
RFX1-201ENST00000254325 KIAA0087Q14695 138 aa10.68□□□□□ -0.7
RFX1-201ENST00000254325 hADV29S1A0JD25 119 aa10.68□□□□□ -0.7
RFX1-201ENST00000254325 HAMPP81172 84 aa10.67□□□□□ -0.7
RFX1-201ENST00000254325 JMJD7-PLA2G4BH0Y9G9 81 aa10.67□□□□□ -0.7
RFX1-201ENST00000254325 MUC7Q8TAX7 377 aa10.67□□□□□ -0.7
RFX1-201ENST00000254325 FAM240AA0A1B0GVK7 77 aa10.67□□□□□ -0.7
RFX1-201ENST00000254325 A0A1B0GX51 115 aa10.67□□□□□ -0.7
RFX1-201ENST00000254325 SYCNQ0VAF6 134 aa10.66□□□□□ -0.7
RFX1-201ENST00000254325 LINC00643Q86TS7 51 aa10.66□□□□□ -0.7
RFX1-201ENST00000254325 CUBNO60494 3623 aa10.66□□□□□ -0.7
RFX1-201ENST00000254325 H3BNG1 76 aa10.66□□□□□ -0.7
RFX1-201ENST00000254325 NOTCH1P46531 2555 aa10.65□□□□□ -0.7
RFX1-201ENST00000254325 WIPF1O43516 503 aa10.65□□□□□ -0.7
RFX1-201ENST00000254325 Q8N814 137 aa10.64□□□□□ -0.71
RFX1-201ENST00000254325 DSCR8Q96T75 97 aa10.64□□□□□ -0.71
RFX1-201ENST00000254325 TRAV23DV6A0A075B6W5 121 aa10.64□□□□□ -0.71
RFX1-201ENST00000254325 COX7BP24311 80 aa10.64□□□□□ -0.71
RFX1-201ENST00000254325 COL6A5A8TX70 2615 aa10.63□□□□□ -0.71
RFX1-201ENST00000254325 TRBV10-3A0A0K0K1G6 114 aa10.63□□□□□ -0.71
RFX1-201ENST00000254325 PRR34Q9NV39 138 aa10.63□□□□□ -0.71
RFX1-201ENST00000254325 EGFEM1PQ0D2K5 195 aa10.63□□□□□ -0.71
RFX1-201ENST00000254325 UBL5Q9BZL1 73 aa10.63□□□□□ -0.71
RFX1-201ENST00000254325 C6orf48Q9UBA6 75 aa10.63□□□□□ -0.71
RFX1-201ENST00000254325 J3KT08 172 aa10.62□□□□□ -0.71
RFX1-201ENST00000254325 Q6ZRU5 148 aa10.62□□□□□ -0.71
RFX1-201ENST00000254325 RBM3P98179 157 aaKnown RBP10.61□□□□□ -0.71
RFX1-201ENST00000254325 Q6ZQY7 126 aa10.61□□□□□ -0.71
RFX1-201ENST00000254325 DPH3Q96FX2 82 aa10.6□□□□□ -0.71
RFX1-201ENST00000254325 ATOX1O00244 68 aa10.59□□□□□ -0.71
RFX1-201ENST00000254325 LINC01556Q5JQF7 62 aa10.59□□□□□ -0.71
RFX1-201ENST00000254325 LOC107984640A0A0U1RRK4 108 aa10.59□□□□□ -0.71
RFX1-201ENST00000254325 ZNF73O43830 326 aaPredicted RBP10.59□□□□□ -0.71
RFX1-201ENST00000254325 M0R378 163 aa10.58□□□□□ -0.72
RFX1-201ENST00000254325 DEFB105AQ8NG35 78 aa10.58□□□□□ -0.72
RFX1-201ENST00000254325 OTOGQ6ZRI0 2925 aa10.58□□□□□ -0.72
RFX1-201ENST00000254325 NDUFC2-KCTD14E9PQ53 114 aa10.57□□□□□ -0.72
RFX1-201ENST00000254325 C5orf47Q569G3 176 aa10.57□□□□□ -0.72
RFX1-201ENST00000254325 ZNF469Q96JG9 3925 aaPredicted RBP10.57□□□□□ -0.72
RFX1-201ENST00000254325 TENM1Q9UKZ4 2725 aa10.56□□□□□ -0.72
RFX1-201ENST00000254325 SDIM1Q6ZPB5 146 aa10.56□□□□□ -0.72
RFX1-201ENST00000254325 C2orf48Q96LS8 159 aa10.56□□□□□ -0.72
RFX1-201ENST00000254325 LINC00575Q6W349 94 aa10.55□□□□□ -0.72
RFX1-201ENST00000254325 VWFP04275 2813 aa10.55□□□□□ -0.72
RFX1-201ENST00000254325 MGAM2Q2M2H8 2515 aa10.55□□□□□ -0.72
RFX1-201ENST00000254325 ETDCA0A1B0GVM5 59 aa10.54□□□□□ -0.72
RFX1-201ENST00000254325 Q6Q795 121 aa10.54□□□□□ -0.72
RFX1-201ENST00000254325 LINC01600Q96MT4 127 aa10.54□□□□□ -0.72
RFX1-201ENST00000254325 H3BQ85 93 aa10.53□□□□□ -0.72
RFX1-201ENST00000254325 USP17L23D6RBM5 183 aa10.53□□□□□ -0.72
RFX1-201ENST00000254325 UQCRQO14949 82 aa10.52□□□□□ -0.72
RFX1-201ENST00000254325 PKIGQ9Y2B9 76 aa10.52□□□□□ -0.72
RFX1-201ENST00000254325 GVQW2A0A096LPI5 108 aaPredicted RBP10.52□□□□□ -0.73
RFX1-201ENST00000254325 CCKP06307 115 aa10.5□□□□□ -0.73
RFX1-201ENST00000254325 IMUPQ9GZP8 106 aa10.5□□□□□ -0.73
RFX1-201ENST00000254325 IGKV2-24A0A0C4DH68 120 aa10.49□□□□□ -0.73
RFX1-201ENST00000254325 LINC00588Q9Y4M8 146 aa10.49□□□□□ -0.73
RFX1-201ENST00000254325 ANK3Q12955 4377 aaKnown RBP10.49□□□□□ -0.73
RFX1-201ENST00000254325 UBE2BP63146 152 aa10.49□□□□□ -0.73
RFX1-201ENST00000254325 FAM19A5Q7Z5A7 132 aaPredicted RBP10.49□□□□□ -0.73
RFX1-201ENST00000254325 LINC00846Q9NV44 126 aa10.49□□□□□ -0.73
RFX1-201ENST00000254325 K7EIL1 84 aa10.49□□□□□ -0.73
RFX1-201ENST00000254325 RPL37AP8A6NKH3 93 aa10.48□□□□□ -0.73
RFX1-201ENST00000254325 C3orf22Q8N5N4 141 aa10.48□□□□□ -0.73
RFX1-201ENST00000254325 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.47□□□□□ -0.73
RFX1-201ENST00000254325 C15orf56Q8N910 161 aa10.47□□□□□ -0.73
RFX1-201ENST00000254325 PDE6GP18545 87 aa10.47□□□□□ -0.73
RFX1-201ENST00000254325 IGLV6-57P01721 117 aa10.46□□□□□ -0.73
RFX1-201ENST00000254325 DNAH10OSP0CZ25 163 aa10.46□□□□□ -0.73
RFX1-201ENST00000254325 C9orf129Q5T035 196 aaKnown RBP10.46□□□□□ -0.73
RFX1-201ENST00000254325 F8WDY8 70 aa10.46□□□□□ -0.74
RFX1-201ENST00000254325 C20orf197Q8N268 126 aa10.46□□□□□ -0.74
RFX1-201ENST00000254325 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.45□□□□□ -0.74
RFX1-201ENST00000254325 TRBV7-7A0A0K0K1E9 115 aa10.44□□□□□ -0.74
RFX1-201ENST00000254325 BAHCC1Q9P281 2608 aa10.44□□□□□ -0.74
RFX1-201ENST00000254325 SMCR5Q8TEV8 140 aa10.44□□□□□ -0.74
RFX1-201ENST00000254325 Q6ZRP5 223 aa10.44□□□□□ -0.74
RFX1-201ENST00000254325 VPREB1P12018 145 aa10.44□□□□□ -0.74
RFX1-201ENST00000254325 Q8NDZ9 215 aa10.43□□□□□ -0.74
RFX1-201ENST00000254325 Q6JHZ5 121 aa10.43□□□□□ -0.74
RFX1-201ENST00000254325 F8WEM9 126 aa10.43□□□□□ -0.74
RFX1-201ENST00000254325 HRCT1Q6UXD1 115 aa10.42□□□□□ -0.74
RFX1-201ENST00000254325 TM2D3Q9BRN9 247 aa10.41□□□□□ -0.74
RFX1-201ENST00000254325 A0A087WVE0 104 aa10.39□□□□□ -0.75
RFX1-201ENST00000254325 C7orf33Q8WU49 177 aa10.39□□□□□ -0.75
RFX1-201ENST00000254325 A0A0U1RQV1 116 aa10.39□□□□□ -0.75
RFX1-201ENST00000254325 ELOF1P60002 83 aaKnown RBP10.38□□□□□ -0.75
RFX1-201ENST00000254325 ATP5EP2Q5VTU8 51 aa10.38□□□□□ -0.75
RFX1-201ENST00000254325 UPK3BQ9BT76 320 aa10.38□□□□□ -0.75
RFX1-201ENST00000254325 TMEM258P61165 79 aa10.37□□□□□ -0.75
RFX1-201ENST00000254325 COX7CP15954 63 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms