RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 Q8N814 137 aa13.12□□□□□ -0.31
CDC42EP1-201ENST00000249014 H3BNG1 76 aa13.11□□□□□ -0.31
CDC42EP1-201ENST00000249014 EGFEM1PQ0D2K5 195 aa13.11□□□□□ -0.31
CDC42EP1-201ENST00000249014 FBN1P35555 2871 aaKnown RBP13.11□□□□□ -0.31
CDC42EP1-201ENST00000249014 C6orf99Q4VX62 202 aa13.11□□□□□ -0.31
CDC42EP1-201ENST00000249014 TENM3Q9P273 2699 aa13.1□□□□□ -0.31
CDC42EP1-201ENST00000249014 S100A7L2Q5SY68 101 aa13.1□□□□□ -0.31
CDC42EP1-201ENST00000249014 MUC7Q8TAX7 377 aa13.1□□□□□ -0.31
CDC42EP1-201ENST00000249014 C6orf48Q9UBA6 75 aa13.1□□□□□ -0.31
CDC42EP1-201ENST00000249014 A0A1B0GX51 115 aa13.09□□□□□ -0.31
CDC42EP1-201ENST00000249014 GVQW2A0A096LPI5 108 aaPredicted RBP13.08□□□□□ -0.31
CDC42EP1-201ENST00000249014 CMYA5Q8N3K9 4069 aa13.08□□□□□ -0.32
CDC42EP1-201ENST00000249014 STAB1Q9NY15 2570 aa13.08□□□□□ -0.32
CDC42EP1-201ENST00000249014 KRTAP26-1Q6PEX3 210 aa13.07□□□□□ -0.32
CDC42EP1-201ENST00000249014 RPL18AQ02543 176 aaKnown RBP13.06□□□□□ -0.32
CDC42EP1-201ENST00000249014 ESRGQ1W209 222 aa13.06□□□□□ -0.32
CDC42EP1-201ENST00000249014 IMUPQ9GZP8 106 aa13.06□□□□□ -0.32
CDC42EP1-201ENST00000249014 BAHCC1Q9P281 2608 aa13.06□□□□□ -0.32
CDC42EP1-201ENST00000249014 HIGD2BQ4VC39 106 aa13.05□□□□□ -0.32
CDC42EP1-201ENST00000249014 IGLV6-57P01721 117 aa13.04□□□□□ -0.32
CDC42EP1-201ENST00000249014 XAGE1AQ9HD64 81 aa13.04□□□□□ -0.32
CDC42EP1-201ENST00000249014 LINC00575Q6W349 94 aa13.03□□□□□ -0.32
CDC42EP1-201ENST00000249014 C3orf56Q8N813 242 aa13.03□□□□□ -0.32
CDC42EP1-201ENST00000249014 FLNBO75369 2602 aaKnown RBP13.02□□□□□ -0.33
CDC42EP1-201ENST00000249014 LINC00846Q9NV44 126 aa13.02□□□□□ -0.33
CDC42EP1-201ENST00000249014 CCDC179H3BU77 68 aa13.01□□□□□ -0.33
CDC42EP1-201ENST00000249014 TMEM256-PLSCR3K7ERE1 68 aa13.01□□□□□ -0.33
CDC42EP1-201ENST00000249014 FAM236AA0A1B0GUQ0 79 aa13.01□□□□□ -0.33
CDC42EP1-201ENST00000249014 FAM236BA0A1B0GV22 79 aa13.01□□□□□ -0.33
CDC42EP1-201ENST00000249014 ZNF561-AS1K7EIQ3 104 aa13.01□□□□□ -0.33
CDC42EP1-201ENST00000249014 C15orf56Q8N910 161 aa13□□□□□ -0.33
CDC42EP1-201ENST00000249014 CAMK2N2Q96S95 79 aa13□□□□□ -0.33
CDC42EP1-201ENST00000249014 DEFB131BA0A096LNP1 70 aa12.99□□□□□ -0.33
CDC42EP1-201ENST00000249014 TRBV10-3A0A0K0K1G6 114 aa12.98□□□□□ -0.33
CDC42EP1-201ENST00000249014 C11orf45Q8TAV5 145 aa12.98□□□□□ -0.33
CDC42EP1-201ENST00000249014 JMJD7-PLA2G4BH0Y9G9 81 aa12.97□□□□□ -0.33
CDC42EP1-201ENST00000249014 CCKP06307 115 aa12.97□□□□□ -0.33
CDC42EP1-201ENST00000249014 Q6ZRU5 148 aa12.97□□□□□ -0.33
CDC42EP1-201ENST00000249014 hADV29S1A0JD25 119 aa12.97□□□□□ -0.33
CDC42EP1-201ENST00000249014 DNAH3Q8TD57 4116 aa12.96□□□□□ -0.33
CDC42EP1-201ENST00000249014 B5MCH6 92 aa12.96□□□□□ -0.33
CDC42EP1-201ENST00000249014 LINC01556Q5JQF7 62 aa12.95□□□□□ -0.34
CDC42EP1-201ENST00000249014 MAST4O15021 2626 aa12.94□□□□□ -0.34
CDC42EP1-201ENST00000249014 TRAV23DV6A0A075B6W5 121 aa12.94□□□□□ -0.34
CDC42EP1-201ENST00000249014 C1orf43Q9BWL3 253 aa12.94□□□□□ -0.34
CDC42EP1-201ENST00000249014 VPREB1P12018 145 aa12.93□□□□□ -0.34
CDC42EP1-201ENST00000249014 IGKV2D-24A0A075B6R9 120 aa12.91□□□□□ -0.34
CDC42EP1-201ENST00000249014 IGKV3D-7A0A0C4DH55 119 aa12.91□□□□□ -0.34
CDC42EP1-201ENST00000249014 Q6JHZ5 121 aa12.91□□□□□ -0.34
CDC42EP1-201ENST00000249014 C2orf48Q96LS8 159 aa12.91□□□□□ -0.34
CDC42EP1-201ENST00000249014 NOTCH1P46531 2555 aa12.9□□□□□ -0.34
CDC42EP1-201ENST00000249014 DIRC1Q969H9 104 aa12.9□□□□□ -0.34
CDC42EP1-201ENST00000249014 NDUFC2-KCTD14E9PQ53 114 aa12.9□□□□□ -0.34
CDC42EP1-201ENST00000249014 Q6ZQY7 126 aa12.9□□□□□ -0.34
CDC42EP1-201ENST00000249014 ZNF73O43830 326 aaPredicted RBP12.89□□□□□ -0.35
CDC42EP1-201ENST00000249014 PRB2P02812 416 aaPredicted RBP12.88□□□□□ -0.35
CDC42EP1-201ENST00000249014 Q6ZRP5 223 aa12.87□□□□□ -0.35
CDC42EP1-201ENST00000249014 SS18L2Q9UHA2 77 aa12.86□□□□□ -0.35
CDC42EP1-201ENST00000249014 DNAH10OSP0CZ25 163 aa12.86□□□□□ -0.35
CDC42EP1-201ENST00000249014 HIST1H4AP62805 103 aaKnown RBP12.86□□□□□ -0.35
CDC42EP1-201ENST00000249014 RBM3P98179 157 aaKnown RBP12.85□□□□□ -0.35
CDC42EP1-201ENST00000249014 LAMTOR3Q9UHA4 124 aa12.85□□□□□ -0.35
CDC42EP1-201ENST00000249014 M0R378 163 aa12.84□□□□□ -0.35
CDC42EP1-201ENST00000249014 COX7BP24311 80 aa12.84□□□□□ -0.35
CDC42EP1-201ENST00000249014 ELOF1P60002 83 aaKnown RBP12.84□□□□□ -0.35
CDC42EP1-201ENST00000249014 Q6ZQT0 140 aa12.84□□□□□ -0.35
CDC42EP1-201ENST00000249014 SYCNQ0VAF6 134 aa12.83□□□□□ -0.36
CDC42EP1-201ENST00000249014 A0A087WVE0 104 aa12.82□□□□□ -0.36
CDC42EP1-201ENST00000249014 LINC00588Q9Y4M8 146 aa12.81□□□□□ -0.36
CDC42EP1-201ENST00000249014 LOC110117498A0A087WWA1 95 aa12.81□□□□□ -0.36
CDC42EP1-201ENST00000249014 TRAV10A0A0B4J240 114 aa12.8□□□□□ -0.36
CDC42EP1-201ENST00000249014 TRBV7-6A0A0J9YX20 115 aa12.8□□□□□ -0.36
CDC42EP1-201ENST00000249014 M0R2N4 97 aa12.8□□□□□ -0.36
CDC42EP1-201ENST00000249014 F8WDY8 70 aa12.8□□□□□ -0.36
CDC42EP1-201ENST00000249014 COL6A5A8TX70 2615 aa12.8□□□□□ -0.36
CDC42EP1-201ENST00000249014 NBEAL1Q6ZS30 2694 aa12.79□□□□□ -0.36
CDC42EP1-201ENST00000249014 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.79□□□□□ -0.36
CDC42EP1-201ENST00000249014 MRAPQ8TCY5 172 aa12.78□□□□□ -0.36
CDC42EP1-201ENST00000249014 TM2D3Q9BRN9 247 aa12.78□□□□□ -0.36
CDC42EP1-201ENST00000249014 LINC00528Q8N1L1 170 aa12.77□□□□□ -0.37
CDC42EP1-201ENST00000249014 H3BQ85 93 aa12.76□□□□□ -0.37
CDC42EP1-201ENST00000249014 CASC10Q5T4H9 136 aa12.76□□□□□ -0.37
CDC42EP1-201ENST00000249014 K7EIL1 84 aa12.76□□□□□ -0.37
CDC42EP1-201ENST00000249014 C3orf22Q8N5N4 141 aa12.76□□□□□ -0.37
CDC42EP1-201ENST00000249014 DSCR8Q96T75 97 aa12.76□□□□□ -0.37
CDC42EP1-201ENST00000249014 ATOX1O00244 68 aa12.75□□□□□ -0.37
CDC42EP1-201ENST00000249014 SERTAD4-AS1Q5TG53 156 aa12.75□□□□□ -0.37
CDC42EP1-201ENST00000249014 HUWE1Q7Z6Z7 4374 aaKnown RBP12.75□□□□□ -0.37
CDC42EP1-201ENST00000249014 UBL5Q9BZL1 73 aa12.74□□□□□ -0.37
CDC42EP1-201ENST00000249014 UQCRQO14949 82 aa12.73□□□□□ -0.37
CDC42EP1-201ENST00000249014 ATP5EP2Q5VTU8 51 aa12.73□□□□□ -0.37
CDC42EP1-201ENST00000249014 DNAH1Q9P2D7 4330 aa12.72□□□□□ -0.37
CDC42EP1-201ENST00000249014 USP17L23D6RBM5 183 aa12.71□□□□□ -0.37
CDC42EP1-201ENST00000249014 COX7CP15954 63 aa12.71□□□□□ -0.37
CDC42EP1-201ENST00000249014 FAM19A1Q7Z5A9 133 aa12.7□□□□□ -0.38
CDC42EP1-201ENST00000249014 C7orf33Q8WU49 177 aa12.7□□□□□ -0.38
CDC42EP1-201ENST00000249014 TRBV7-4A0A0J9YYF1 115 aa12.7□□□□□ -0.38
CDC42EP1-201ENST00000249014 TLX1NBP0CAT3 122 aa12.7□□□□□ -0.38
CDC42EP1-201ENST00000249014 C9orf153Q5TBE3 101 aa12.7□□□□□ -0.38
CDC42EP1-201ENST00000249014 NKAPP1Q8N9T2 125 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms