RNA–Protein interactions for RNA: ENST00000233505.12

CENPA-201, Transcript of centromere protein A, humanhuman

TSL 1 (best) BASIC

Gene CENPA, Length 1,299 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-201ENST00000233505 SND1-IT1Q9HBX3 110 aa11.98□□□□□ -0.49
CENPA-201ENST00000233505 IGLV5-37A0A075B6J1 123 aa11.97□□□□□ -0.49
CENPA-201ENST00000233505 PRR3P79522 188 aaKnown RBP11.97□□□□□ -0.49
CENPA-201ENST00000233505 LINC00158P58513 81 aa11.96□□□□□ -0.49
CENPA-201ENST00000233505 MEIG1Q5JSS6 88 aa11.96□□□□□ -0.49
CENPA-201ENST00000233505 DMBT1Q9UGM3 2413 aaPredicted RBP11.95□□□□□ -0.5
CENPA-201ENST00000233505 PKHD1L1Q86WI1 4243 aa11.95□□□□□ -0.5
CENPA-201ENST00000233505 SMIM13P0DJ93 91 aa11.95□□□□□ -0.5
CENPA-201ENST00000233505 C22orf24Q9Y442 160 aa11.95□□□□□ -0.5
CENPA-201ENST00000233505 LBHQ53QV2 105 aaPredicted RBP11.94□□□□□ -0.5
CENPA-201ENST00000233505 MRPL55Q7Z7F7 128 aaKnown RBP11.92□□□□□ -0.5
CENPA-201ENST00000233505 VPREB1P12018 145 aa11.91□□□□□ -0.5
CENPA-201ENST00000233505 RPL24P83731 157 aaKnown RBP11.91□□□□□ -0.5
CENPA-201ENST00000233505 MIR7-3HGQ8N6C7 128 aa11.91□□□□□ -0.5
CENPA-201ENST00000233505 PSORS1C2Q9UIG4 136 aa11.91□□□□□ -0.5
CENPA-201ENST00000233505 IGKV2D-26A0A0A0MRZ7 120 aa11.9□□□□□ -0.5
CENPA-201ENST00000233505 A0A0U1RRA0 63 aa11.9□□□□□ -0.5
CENPA-201ENST00000233505 UBE2BP63146 152 aa11.9□□□□□ -0.5
CENPA-201ENST00000233505 NKAPP1Q8N9T2 125 aa11.9□□□□□ -0.5
CENPA-201ENST00000233505 A0A0J9YXY3 114 aa11.89□□□□□ -0.51
CENPA-201ENST00000233505 ATOH7Q8N100 152 aa11.89□□□□□ -0.51
CENPA-201ENST00000233505 LOC107984156A0A0G2JMH3 177 aa11.88□□□□□ -0.51
CENPA-201ENST00000233505 HNRNPA3P51991 378 aaKnown RBP11.88□□□□□ -0.51
CENPA-201ENST00000233505 ANKRD39Q53RE8 183 aa11.88□□□□□ -0.51
CENPA-201ENST00000233505 KRTAP11-1Q8IUC1 163 aa11.88□□□□□ -0.51
CENPA-201ENST00000233505 ARL17AQ8IVW1 177 aa11.88□□□□□ -0.51
CENPA-201ENST00000233505 ZNF815PA8K554 130 aa11.86□□□□□ -0.51
CENPA-201ENST00000233505 TIMM17BO60830 172 aa11.86□□□□□ -0.51
CENPA-201ENST00000233505 Q8NDZ9 215 aa11.86□□□□□ -0.51
CENPA-201ENST00000233505 C1orf137Q5JT78 98 aa11.85□□□□□ -0.51
CENPA-201ENST00000233505 LINC00167Q96N53 147 aa11.85□□□□□ -0.51
CENPA-201ENST00000233505 BOD1L2Q8IYS8 172 aa11.84□□□□□ -0.51
CENPA-201ENST00000233505 HSBP1L1C9JCN9 74 aa11.83□□□□□ -0.52
CENPA-201ENST00000233505 SRSF9Q13242 221 aaKnown RBP eCLIP11.83□□□□□ -0.52
CENPA-201ENST00000233505 LITAFQ99732 161 aa11.83□□□□□ -0.52
CENPA-201ENST00000233505 SPINK6Q6UWN8 80 aa11.82□□□□□ -0.52
CENPA-201ENST00000233505 DAND5Q8N907 189 aa11.82□□□□□ -0.52
CENPA-201ENST00000233505 TTTY13Q9BZ97 58 aa11.82□□□□□ -0.52
CENPA-201ENST00000233505 FAT3Q8TDW7 4589 aa11.82□□□□□ -0.52
CENPA-201ENST00000233505 GAGE10A6NGK3 116 aa11.81□□□□□ -0.52
CENPA-201ENST00000233505 SCGB1D1O95968 90 aa11.81□□□□□ -0.52
CENPA-201ENST00000233505 IGLV7-43P04211 117 aa11.81□□□□□ -0.52
CENPA-201ENST00000233505 ADAMTSL4-AS1Q5T5F5 129 aa11.81□□□□□ -0.52
CENPA-201ENST00000233505 M0R378 163 aa11.8□□□□□ -0.52
CENPA-201ENST00000233505 MIEN1Q9BRT3 115 aa11.8□□□□□ -0.52
CENPA-201ENST00000233505 IGLV1-50A0A075B6I6 118 aa11.79□□□□□ -0.52
CENPA-201ENST00000233505 LRP1Q07954 4544 aaKnown RBP11.78□□□□□ -0.52
CENPA-201ENST00000233505 RPL37AP8A6NKH3 93 aa11.78□□□□□ -0.52
CENPA-201ENST00000233505 NDUFC2O95298 119 aa11.78□□□□□ -0.52
CENPA-201ENST00000233505 PCP2Q8IVA1 136 aa11.78□□□□□ -0.52
CENPA-201ENST00000233505 TRBV10-2A0A0K0K1G8 114 aa11.77□□□□□ -0.53
CENPA-201ENST00000233505 BCE1O60756 84 aa11.77□□□□□ -0.53
CENPA-201ENST00000233505 OXTP01178 125 aa11.77□□□□□ -0.53
CENPA-201ENST00000233505 SCGB1D4Q6XE38 83 aa11.77□□□□□ -0.53
CENPA-201ENST00000233505 KRTAP3-3Q9BYR6 98 aa11.77□□□□□ -0.53
CENPA-201ENST00000233505 KRTAP3-2Q9BYR7 98 aa11.77□□□□□ -0.53
CENPA-201ENST00000233505 TMA7Q9Y2S6 64 aaKnown RBP11.77□□□□□ -0.53
CENPA-201ENST00000233505 KRTAP29-1A8MX34 341 aaPredicted RBP11.76□□□□□ -0.53
CENPA-201ENST00000233505 TMEM238C9JI98 176 aa11.76□□□□□ -0.53
CENPA-201ENST00000233505 J3QL48 77 aa11.76□□□□□ -0.53
CENPA-201ENST00000233505 SOSTDC1Q6X4U4 206 aa11.76□□□□□ -0.53
CENPA-201ENST00000233505 SPANXB1Q9NS25 103 aaPredicted RBP11.76□□□□□ -0.53
CENPA-201ENST00000233505 IGKV2-28A0A075B6P5 120 aa11.75□□□□□ -0.53
CENPA-201ENST00000233505 IGKV2D-28P01615 120 aa11.75□□□□□ -0.53
CENPA-201ENST00000233505 JOSD1Q15040 202 aaPredicted RBP11.75□□□□□ -0.53
CENPA-201ENST00000233505 LINC00308Q8TCZ7 52 aa11.75□□□□□ -0.53
CENPA-201ENST00000233505 SPANXDQ9BXN6 97 aa11.75□□□□□ -0.53
CENPA-201ENST00000233505 SPANXCQ9NY87 97 aa11.75□□□□□ -0.53
CENPA-201ENST00000233505 Q6ZVH6 145 aa11.74□□□□□ -0.53
CENPA-201ENST00000233505 PPDPFQ9H3Y8 114 aa11.74□□□□□ -0.53
CENPA-201ENST00000233505 NCR3O14931 201 aa11.73□□□□□ -0.53
CENPA-201ENST00000233505 DIRC1Q969H9 104 aa11.73□□□□□ -0.53
CENPA-201ENST00000233505 ZNF861PO60384 105 aa11.72□□□□□ -0.53
CENPA-201ENST00000233505 EIF4EBP3O60516 100 aaPredicted RBP11.72□□□□□ -0.53
CENPA-201ENST00000233505 TMEM126AQ9H061 195 aa11.72□□□□□ -0.53
CENPA-201ENST00000233505 REG3GQ6UW15 175 aa11.71□□□□□ -0.53
CENPA-201ENST00000233505 COPS9Q8WXC6 57 aa11.71□□□□□ -0.53
CENPA-201ENST00000233505 H0Y9J4 135 aa11.7□□□□□ -0.54
CENPA-201ENST00000233505 PRYO14603 147 aa11.7□□□□□ -0.54
CENPA-201ENST00000233505 IFITM1P13164 125 aa11.7□□□□□ -0.54
CENPA-201ENST00000233505 RPL28P46779 137 aaKnown RBP11.7□□□□□ -0.54
CENPA-201ENST00000233505 NPC2P61916 151 aa11.7□□□□□ -0.54
CENPA-201ENST00000233505 KRTAP13-1Q8IUC0 172 aa11.7□□□□□ -0.54
CENPA-201ENST00000233505 KCNQ1DNQ9H478 68 aa11.7□□□□□ -0.54
CENPA-201ENST00000233505 TRBV10-3A0A0K0K1G6 114 aa11.68□□□□□ -0.54
CENPA-201ENST00000233505 IGLV6-57P01721 117 aa11.67□□□□□ -0.54
CENPA-201ENST00000233505 COX8AP10176 69 aa11.67□□□□□ -0.54
CENPA-201ENST00000233505 DLEU1O43261 78 aa11.66□□□□□ -0.54
CENPA-201ENST00000233505 DDTP30046 118 aa11.66□□□□□ -0.54
CENPA-201ENST00000233505 SPRR1AP35321 89 aa11.66□□□□□ -0.54
CENPA-201ENST00000233505 S100A12P80511 92 aa11.66□□□□□ -0.54
CENPA-201ENST00000233505 VAMP8Q9BV40 100 aa11.66□□□□□ -0.54
CENPA-201ENST00000233505 UBE2AP49459 152 aa11.65□□□□□ -0.54
CENPA-201ENST00000233505 LINC01600Q96MT4 127 aa11.65□□□□□ -0.54
CENPA-201ENST00000233505 PYY3Q5JQD4 70 aa11.64□□□□□ -0.55
CENPA-201ENST00000233505 LINC00518Q8N0U6 118 aa11.64□□□□□ -0.55
CENPA-201ENST00000233505 LINC00337Q8N6G1 96 aa11.64□□□□□ -0.55
CENPA-201ENST00000233505 TNXBP22105 4242 aa11.63□□□□□ -0.55
CENPA-201ENST00000233505 SPATA45Q537H7 98 aa11.63□□□□□ -0.55
CENPA-201ENST00000233505 S100A7L2Q5SY68 101 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms