RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 KLKP1Q107X0 134 aa5.76□□□□□ -1.49
APOB-201ENST00000233242 A8MTW9 85 aa5.75□□□□□ -1.49
APOB-201ENST00000233242 TM2D3Q9BRN9 247 aa5.75□□□□□ -1.49
APOB-201ENST00000233242 ELOF1P60002 83 aaKnown RBP5.74□□□□□ -1.49
APOB-201ENST00000233242 NHLRC4P0CG21 123 aaPredicted RBP5.74□□□□□ -1.49
APOB-201ENST00000233242 CD164Q04900 197 aa5.74□□□□□ -1.49
APOB-201ENST00000233242 FLG2Q5D862 2391 aaPredicted RBP5.74□□□□□ -1.49
APOB-201ENST00000233242 LITAFQ99732 161 aa5.73□□□□□ -1.49
APOB-201ENST00000233242 KIAA0087Q14695 138 aa5.73□□□□□ -1.49
APOB-201ENST00000233242 TRAV22A0A0B4J277 110 aa5.73□□□□□ -1.49
APOB-201ENST00000233242 LYPD5Q6UWN5 251 aa5.72□□□□□ -1.49
APOB-201ENST00000233242 SMCR5Q8TEV8 140 aa5.72□□□□□ -1.49
APOB-201ENST00000233242 C6orf48Q9UBA6 75 aa5.72□□□□□ -1.49
APOB-201ENST00000233242 EPG5Q9HCE0 2579 aa5.72□□□□□ -1.49
APOB-201ENST00000233242 EDN2P20800 178 aa5.71□□□□□ -1.49
APOB-201ENST00000233242 CIRBP-AS1Q8TBR5 109 aa5.71□□□□□ -1.49
APOB-201ENST00000233242 Q6ZRU5 148 aa5.7□□□□□ -1.5
APOB-201ENST00000233242 C16orf95Q9H693 158 aa5.7□□□□□ -1.5
APOB-201ENST00000233242 ATP11AUNQ6ZP68 121 aa5.7□□□□□ -1.5
APOB-201ENST00000233242 Q6ZRX8 168 aa5.7□□□□□ -1.5
APOB-201ENST00000233242 LY6G6DO95868 133 aa5.7□□□□□ -1.5
APOB-201ENST00000233242 ATRQ13535 2644 aa5.7□□□□□ -1.5
APOB-201ENST00000233242 TRBV7-4A0A0J9YYF1 115 aa5.7□□□□□ -1.5
APOB-201ENST00000233242 FHL3Q13643 280 aa5.7□□□□□ -1.5
APOB-201ENST00000233242 AVPP01185 164 aa5.69□□□□□ -1.5
APOB-201ENST00000233242 RETNLBQ9BQ08 111 aa5.69□□□□□ -1.5
APOB-201ENST00000233242 KLK9Q2XQG4 91 aa5.69□□□□□ -1.5
APOB-201ENST00000233242 SPINK1P00995 79 aa5.69□□□□□ -1.5
APOB-201ENST00000233242 MAST4O15021 2626 aa5.69□□□□□ -1.5
APOB-201ENST00000233242 NUPR2A6NF83 97 aa5.69□□□□□ -1.5
APOB-201ENST00000233242 WIPF1O43516 503 aa5.69□□□□□ -1.5
APOB-201ENST00000233242 C22orf24Q9Y442 160 aa5.68□□□□□ -1.5
APOB-201ENST00000233242 DEFB116Q30KQ4 102 aa5.68□□□□□ -1.5
APOB-201ENST00000233242 GVQW2A0A096LPI5 108 aaPredicted RBP5.68□□□□□ -1.5
APOB-201ENST00000233242 MOBPQ13875 183 aa5.68□□□□□ -1.5
APOB-201ENST00000233242 LOC101927531A0A1B0GV80 90 aa5.68□□□□□ -1.5
APOB-201ENST00000233242 Q9UF83 564 aa5.68□□□□□ -1.5
APOB-201ENST00000233242 MGAM2Q2M2H8 2515 aa5.68□□□□□ -1.5
APOB-201ENST00000233242 LINC01556Q5JQF7 62 aa5.67□□□□□ -1.5
APOB-201ENST00000233242 PRLHP81277 87 aa5.67□□□□□ -1.5
APOB-201ENST00000233242 IGLV6-57P01721 117 aa5.67□□□□□ -1.5
APOB-201ENST00000233242 C7orf65Q6ZTY9 151 aa5.67□□□□□ -1.5
APOB-201ENST00000233242 LINC00336Q6ZUF6 198 aa5.67□□□□□ -1.5
APOB-201ENST00000233242 INAFM1C9JVW0 142 aa5.66□□□□□ -1.5
APOB-201ENST00000233242 H3BNG1 76 aa5.66□□□□□ -1.5
APOB-201ENST00000233242 H7BZZ5 65 aa5.66□□□□□ -1.5
APOB-201ENST00000233242 KTN1-AS1Q86SY8 53 aa5.66□□□□□ -1.5
APOB-201ENST00000233242 COL27A1Q8IZC6 1860 aaPredicted RBP5.65□□□□□ -1.5
APOB-201ENST00000233242 X6R8D5 127 aa5.64□□□□□ -1.51
APOB-201ENST00000233242 IGKV2D-30A0A075B6S6 120 aa5.64□□□□□ -1.51
APOB-201ENST00000233242 IGKV2-30P06310 120 aa5.64□□□□□ -1.51
APOB-201ENST00000233242 A8MWP4 228 aa5.64□□□□□ -1.51
APOB-201ENST00000233242 A8MUN3 132 aa5.64□□□□□ -1.51
APOB-201ENST00000233242 LINC00167Q96N53 147 aa5.64□□□□□ -1.51
APOB-201ENST00000233242 LINC00476Q8WZB0 136 aa5.63□□□□□ -1.51
APOB-201ENST00000233242 COA5Q86WW8 74 aa5.63□□□□□ -1.51
APOB-201ENST00000233242 IGLV5-52A0A0A0MRZ9 124 aa5.63□□□□□ -1.51
APOB-201ENST00000233242 AKAP13Q12802 2813 aa5.63□□□□□ -1.51
APOB-201ENST00000233242 LINC01600Q96MT4 127 aa5.63□□□□□ -1.51
APOB-201ENST00000233242 UQCR11O14957 56 aa5.62□□□□□ -1.51
APOB-201ENST00000233242 FLNBO75369 2602 aaKnown RBP5.62□□□□□ -1.51
APOB-201ENST00000233242 PRR15Q8IV56 129 aa5.62□□□□□ -1.51
APOB-201ENST00000233242 BPTFQ12830 3046 aa5.62□□□□□ -1.51
APOB-201ENST00000233242 HECTD1Q9ULT8 2610 aa5.61□□□□□ -1.51
APOB-201ENST00000233242 SPANXA2-OT1Q8N9U9 137 aa5.61□□□□□ -1.51
APOB-201ENST00000233242 FAM229AH3BQW9 127 aa5.6□□□□□ -1.51
APOB-201ENST00000233242 CDSNQ15517 529 aa5.6□□□□□ -1.51
APOB-201ENST00000233242 M0R2N4 97 aa5.6□□□□□ -1.51
APOB-201ENST00000233242 FSHBP01225 129 aa5.6□□□□□ -1.51
APOB-201ENST00000233242 LCA10Q71F78 164 aa5.6□□□□□ -1.51
APOB-201ENST00000233242 PRO3102Q9H379 93 aa5.58□□□□□ -1.52
APOB-201ENST00000233242 KCNQ1DNQ9H478 68 aa5.58□□□□□ -1.52
APOB-201ENST00000233242 A0A1W2PPR1 153 aa5.57□□□□□ -1.52
APOB-201ENST00000233242 CENPFP49454 3210 aa5.57□□□□□ -1.52
APOB-201ENST00000233242 Q6ZRP5 223 aa5.57□□□□□ -1.52
APOB-201ENST00000233242 OXLD1Q5BKU9 147 aa5.57□□□□□ -1.52
APOB-201ENST00000233242 LINC00528Q8N1L1 170 aa5.57□□□□□ -1.52
APOB-201ENST00000233242 C16orf90A8MZG2 172 aa5.56□□□□□ -1.52
APOB-201ENST00000233242 OBSCN-AS1Q96MR7 158 aa5.56□□□□□ -1.52
APOB-201ENST00000233242 K7EQZ3 153 aa5.56□□□□□ -1.52
APOB-201ENST00000233242 SPINT4Q6UDR6 99 aa5.56□□□□□ -1.52
APOB-201ENST00000233242 EPM2AB3EWF7 344 aa5.56□□□□□ -1.52
APOB-201ENST00000233242 CR1P17927 2039 aa5.56□□□□□ -1.52
APOB-201ENST00000233242 PCSK5Q92824 1860 aa5.55□□□□□ -1.52
APOB-201ENST00000233242 Q1T7F1 81 aa5.55□□□□□ -1.52
APOB-201ENST00000233242 LINC00313P59037 77 aa5.55□□□□□ -1.52
APOB-201ENST00000233242 CDC42SE1Q9NRR8 79 aa5.55□□□□□ -1.52
APOB-201ENST00000233242 CENPEQ02224 2701 aa5.54□□□□□ -1.52
APOB-201ENST00000233242 MIR22HGQ0VDD5 57 aa5.54□□□□□ -1.52
APOB-201ENST00000233242 LY6G6CO95867 125 aa5.54□□□□□ -1.52
APOB-201ENST00000233242 PLA2G2AP14555 144 aa5.54□□□□□ -1.52
APOB-201ENST00000233242 C1orf134Q5TEV5 83 aa5.54□□□□□ -1.52
APOB-201ENST00000233242 MRPL34Q9BQ48 92 aaKnown RBP5.53□□□□□ -1.52
APOB-201ENST00000233242 RPL37AP61513 92 aaKnown RBP5.53□□□□□ -1.52
APOB-201ENST00000233242 STAB1Q9NY15 2570 aa5.52□□□□□ -1.53
APOB-201ENST00000233242 ST20-AS1Q8NBB2 130 aa5.51□□□□□ -1.53
APOB-201ENST00000233242 SSBP3-AS1Q7Z2R9 100 aa5.51□□□□□ -1.53
APOB-201ENST00000233242 EIF4EBP3O60516 100 aaPredicted RBP5.5□□□□□ -1.53
APOB-201ENST00000233242 NOTCH1P46531 2555 aa5.5□□□□□ -1.53
APOB-201ENST00000233242 DNAH10OSP0CZ25 163 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms