RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 RPL37AP61513 92 aaKnown RBP9.14□□□□□ -0.95
NEK4-201ENST00000233027 LIMD2Q9BT23 127 aa9.14□□□□□ -0.95
NEK4-201ENST00000233027 SPAG11AQ6PDA7 123 aa9.13□□□□□ -0.95
NEK4-201ENST00000233027 LINC00476Q8WZB0 136 aa9.13□□□□□ -0.95
NEK4-201ENST00000233027 LITAFQ99732 161 aa9.13□□□□□ -0.95
NEK4-201ENST00000233027 GOLGB1Q14789 3259 aaKnown RBP9.13□□□□□ -0.95
NEK4-201ENST00000233027 MDFIQ99750 246 aa9.13□□□□□ -0.95
NEK4-201ENST00000233027 FSHBP01225 129 aa9.12□□□□□ -0.95
NEK4-201ENST00000233027 SPACA4Q8TDM5 124 aa9.12□□□□□ -0.95
NEK4-201ENST00000233027 LOC110117498A0A087WWA1 95 aa9.12□□□□□ -0.95
NEK4-201ENST00000233027 A0A1B0GU69 56 aa9.11□□□□□ -0.95
NEK4-201ENST00000233027 CHTF8P0CG12 524 aa9.11□□□□□ -0.95
NEK4-201ENST00000233027 Q6ZRX8 168 aa9.1□□□□□ -0.95
NEK4-201ENST00000233027 Q8NBF4 154 aa9.08□□□□□ -0.96
NEK4-201ENST00000233027 BCE1O60756 84 aa9.08□□□□□ -0.96
NEK4-201ENST00000233027 NCOR2Q9Y618 2525 aa9.07□□□□□ -0.96
NEK4-201ENST00000233027 EPM2AB3EWF7 344 aa9.07□□□□□ -0.96
NEK4-201ENST00000233027 TP53AIP1Q9HCN2 124 aa9.07□□□□□ -0.96
NEK4-201ENST00000233027 ACYP2P14621 99 aa9.06□□□□□ -0.96
NEK4-201ENST00000233027 CENPFP49454 3210 aa9.06□□□□□ -0.96
NEK4-201ENST00000233027 PCSK5Q92824 1860 aa9.06□□□□□ -0.96
NEK4-201ENST00000233027 RPS28P62857 69 aaKnown RBP9.06□□□□□ -0.96
NEK4-201ENST00000233027 FAM168BA1KXE4 195 aa9.06□□□□□ -0.96
NEK4-201ENST00000233027 Q6ZRP5 223 aa9.05□□□□□ -0.96
NEK4-201ENST00000233027 Q8NAQ8 132 aa9.03□□□□□ -0.96
NEK4-201ENST00000233027 IGLV8-61A0A075B6I0 122 aa9.03□□□□□ -0.96
NEK4-201ENST00000233027 EIF4EBP3O60516 100 aaPredicted RBP9.02□□□□□ -0.96
NEK4-201ENST00000233027 H3BNG1 76 aa9.02□□□□□ -0.97
NEK4-201ENST00000233027 LINC00588Q9Y4M8 146 aa9.02□□□□□ -0.97
NEK4-201ENST00000233027 TRAV22A0A0B4J277 110 aa9.01□□□□□ -0.97
NEK4-201ENST00000233027 NHLRC4P0CG21 123 aaPredicted RBP9□□□□□ -0.97
NEK4-201ENST00000233027 MYO18BQ8IUG5 2567 aa9□□□□□ -0.97
NEK4-201ENST00000233027 C16orf90A8MZG2 172 aa9□□□□□ -0.97
NEK4-201ENST00000233027 IGLV6-57P01721 117 aa9□□□□□ -0.97
NEK4-201ENST00000233027 K7EQZ3 153 aa9□□□□□ -0.97
NEK4-201ENST00000233027 RTL8CO15255 209 aa9□□□□□ -0.97
NEK4-201ENST00000233027 A0A1B0GW54 56 aa8.99□□□□□ -0.97
NEK4-201ENST00000233027 VPREB1P12018 145 aa8.99□□□□□ -0.97
NEK4-201ENST00000233027 LINC00313P59037 77 aa8.99□□□□□ -0.97
NEK4-201ENST00000233027 GVQW2A0A096LPI5 108 aaPredicted RBP8.99□□□□□ -0.97
NEK4-201ENST00000233027 SERTAD4-AS1Q5TG53 156 aa8.99□□□□□ -0.97
NEK4-201ENST00000233027 TRBV7-4A0A0J9YYF1 115 aa8.98□□□□□ -0.97
NEK4-201ENST00000233027 MUC4Q99102 2169 aa8.97□□□□□ -0.97
NEK4-201ENST00000233027 MYO9AB2RTY4 2548 aa8.97□□□□□ -0.97
NEK4-201ENST00000233027 TLN1Q9Y490 2541 aaKnown RBP8.96□□□□□ -0.97
NEK4-201ENST00000233027 H3BPC8 53 aa8.96□□□□□ -0.97
NEK4-201ENST00000233027 KRTAP24-1Q3LI83 254 aa8.95□□□□□ -0.98
NEK4-201ENST00000233027 ATP11AUNQ6ZP68 121 aa8.95□□□□□ -0.98
NEK4-201ENST00000233027 KLK9Q2XQG4 91 aa8.94□□□□□ -0.98
NEK4-201ENST00000233027 NBDYA0A0U1RRE5 68 aa8.94□□□□□ -0.98
NEK4-201ENST00000233027 FN1P02751 2386 aaKnown RBP8.92□□□□□ -0.98
NEK4-201ENST00000233027 A8MWP4 228 aa8.92□□□□□ -0.98
NEK4-201ENST00000233027 TYMSOSQ8TAI1 123 aa8.92□□□□□ -0.98
NEK4-201ENST00000233027 Q96NJ1 140 aa8.92□□□□□ -0.98
NEK4-201ENST00000233027 A8MUN3 132 aa8.91□□□□□ -0.98
NEK4-201ENST00000233027 CSNK1G2-AS1Q8NCQ2 148 aa8.91□□□□□ -0.98
NEK4-201ENST00000233027 IGLV1-50A0A075B6I6 118 aa8.91□□□□□ -0.98
NEK4-201ENST00000233027 COA5Q86WW8 74 aa8.9□□□□□ -0.98
NEK4-201ENST00000233027 A0A0G2JQZ4 141 aa8.89□□□□□ -0.99
NEK4-201ENST00000233027 A0A1W2PNN7 141 aa8.89□□□□□ -0.99
NEK4-201ENST00000233027 DNAH10OSP0CZ25 163 aa8.88□□□□□ -0.99
NEK4-201ENST00000233027 IGFL1Q6UW32 110 aa8.87□□□□□ -0.99
NEK4-201ENST00000233027 LINC00528Q8N1L1 170 aa8.87□□□□□ -0.99
NEK4-201ENST00000233027 KCNQ1DNQ9H478 68 aa8.86□□□□□ -0.99
NEK4-201ENST00000233027 C8orf87E5RJ46 101 aa8.86□□□□□ -0.99
NEK4-201ENST00000233027 MRPL34Q9BQ48 92 aaKnown RBP8.86□□□□□ -0.99
NEK4-201ENST00000233027 ABCA12Q86UK0 2595 aa8.86□□□□□ -0.99
NEK4-201ENST00000233027 LRRK2Q5S007 2527 aa8.86□□□□□ -0.99
NEK4-201ENST00000233027 C9orf129Q5T035 196 aaKnown RBP8.85□□□□□ -0.99
NEK4-201ENST00000233027 ERC2-IT1O76042 136 aa8.84□□□□□ -0.99
NEK4-201ENST00000233027 C15orf56Q8N910 161 aa8.84□□□□□ -0.99
NEK4-201ENST00000233027 LOC101927531A0A1B0GV80 90 aa8.84□□□□□ -0.99
NEK4-201ENST00000233027 DOPEY1Q5JWR5 2465 aa8.83□□□□□ -1
NEK4-201ENST00000233027 DSCR10P59022 87 aa8.83□□□□□ -1
NEK4-201ENST00000233027 Q8N377 158 aa8.82□□□□□ -1
NEK4-201ENST00000233027 JMJD1CQ15652 2540 aa8.82□□□□□ -1
NEK4-201ENST00000233027 KRTAP10-11P60412 298 aa8.81□□□□□ -1
NEK4-201ENST00000233027 TLN2Q9Y4G6 2542 aa8.81□□□□□ -1
NEK4-201ENST00000233027 SPINT4Q6UDR6 99 aa8.81□□□□□ -1
NEK4-201ENST00000233027 GIG44P09565 113 aaPredicted RBP8.8□□□□□ -1
NEK4-201ENST00000233027 LINC01600Q96MT4 127 aa8.8□□□□□ -1
NEK4-201ENST00000233027 USP9XQ93008 2570 aaPredicted RBP8.79□□□□□ -1
NEK4-201ENST00000233027 C8orf17Q9NRJ1 99 aa8.78□□□□□ -1
NEK4-201ENST00000233027 PRR34Q9NV39 138 aa8.78□□□□□ -1
NEK4-201ENST00000233027 KLKP1Q107X0 134 aa8.78□□□□□ -1
NEK4-201ENST00000233027 PRR15Q8IV56 129 aa8.78□□□□□ -1
NEK4-201ENST00000233027 FAM229AH3BQW9 127 aa8.77□□□□□ -1
NEK4-201ENST00000233027 KRTAP10-3P60369 221 aa8.77□□□□□ -1
NEK4-201ENST00000233027 H7BZZ5 65 aa8.77□□□□□ -1.01
NEK4-201ENST00000233027 PLA2G1BP04054 148 aaKnown RBP8.77□□□□□ -1.01
NEK4-201ENST00000233027 DNAH12Q6ZR08 3092 aa8.76□□□□□ -1.01
NEK4-201ENST00000233027 SSBP3-AS1Q7Z2R9 100 aa8.76□□□□□ -1.01
NEK4-201ENST00000233027 LINC00336Q6ZUF6 198 aa8.76□□□□□ -1.01
NEK4-201ENST00000233027 ANAPC11Q9NYG5 84 aa8.75□□□□□ -1.01
NEK4-201ENST00000233027 CYP4F30PQ9H0H9 118 aa8.75□□□□□ -1.01
NEK4-201ENST00000233027 PIEZO1Q92508 2521 aa8.74□□□□□ -1.01
NEK4-201ENST00000233027 C19orf73Q9NVV2 129 aa8.74□□□□□ -1.01
NEK4-201ENST00000233027 SETD2Q9BYW2 2564 aaPredicted RBP8.74□□□□□ -1.01
NEK4-201ENST00000233027 ANKRD11Q6UB99 2663 aaPredicted RBP8.72□□□□□ -1.01
NEK4-201ENST00000233027 A0A1B0GVX0 72 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms