RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 PKHD1L1Q86WI1 4243 aa11.3□□□□□ -0.6
PFN1-201ENST00000225655 MT1HL1P0DM35 61 aa11.29□□□□□ -0.6
PFN1-201ENST00000225655 LINC00158P58513 81 aa11.28□□□□□ -0.6
PFN1-201ENST00000225655 TSPEAR-AS2P59090 65 aa11.28□□□□□ -0.6
PFN1-201ENST00000225655 PLA2G2DQ9UNK4 145 aa11.28□□□□□ -0.6
PFN1-201ENST00000225655 ZNF815PA8K554 130 aa11.25□□□□□ -0.61
PFN1-201ENST00000225655 PRR3P79522 188 aaKnown RBP11.24□□□□□ -0.61
PFN1-201ENST00000225655 XAGE1AQ9HD64 81 aa11.24□□□□□ -0.61
PFN1-201ENST00000225655 HMCN2Q8NDA2 5059 aa11.23□□□□□ -0.61
PFN1-201ENST00000225655 SMIM13P0DJ93 91 aa11.23□□□□□ -0.61
PFN1-201ENST00000225655 JOSD1Q15040 202 aaPredicted RBP11.23□□□□□ -0.61
PFN1-201ENST00000225655 ANKRD39Q53RE8 183 aa11.23□□□□□ -0.61
PFN1-201ENST00000225655 IGKV2D-26A0A0A0MRZ7 120 aa11.22□□□□□ -0.61
PFN1-201ENST00000225655 A0A0U1RRA0 63 aa11.22□□□□□ -0.61
PFN1-201ENST00000225655 C9orf129Q5T035 196 aaKnown RBP11.22□□□□□ -0.61
PFN1-201ENST00000225655 FAM19A5Q7Z5A7 132 aaPredicted RBP11.22□□□□□ -0.61
PFN1-201ENST00000225655 SCGB1D4Q6XE38 83 aa11.21□□□□□ -0.61
PFN1-201ENST00000225655 SND1-IT1Q9HBX3 110 aa11.21□□□□□ -0.61
PFN1-201ENST00000225655 A0A0J9YXY3 114 aa11.2□□□□□ -0.62
PFN1-201ENST00000225655 RPL24P83731 157 aaKnown RBP11.19□□□□□ -0.62
PFN1-201ENST00000225655 MIR7-3HGQ8N6C7 128 aa11.19□□□□□ -0.62
PFN1-201ENST00000225655 MIEN1Q9BRT3 115 aa11.19□□□□□ -0.62
PFN1-201ENST00000225655 A0A1W2PNN7 141 aa11.18□□□□□ -0.62
PFN1-201ENST00000225655 TIMM17BO60830 172 aa11.18□□□□□ -0.62
PFN1-201ENST00000225655 VAMP8Q9BV40 100 aa11.18□□□□□ -0.62
PFN1-201ENST00000225655 FAM168BA1KXE4 195 aa11.17□□□□□ -0.62
PFN1-201ENST00000225655 M0QXV9 152 aa11.17□□□□□ -0.62
PFN1-201ENST00000225655 LBHQ53QV2 105 aaPredicted RBP11.17□□□□□ -0.62
PFN1-201ENST00000225655 NKAPP1Q8N9T2 125 aa11.17□□□□□ -0.62
PFN1-201ENST00000225655 TMEM238C9JI98 176 aa11.16□□□□□ -0.62
PFN1-201ENST00000225655 LINC01600Q96MT4 127 aa11.16□□□□□ -0.62
PFN1-201ENST00000225655 TTTY13Q9BZ97 58 aa11.16□□□□□ -0.62
PFN1-201ENST00000225655 PCP2Q8IVA1 136 aa11.15□□□□□ -0.62
PFN1-201ENST00000225655 COPS9Q8WXC6 57 aa11.15□□□□□ -0.62
PFN1-201ENST00000225655 UBE2BP63146 152 aa11.14□□□□□ -0.63
PFN1-201ENST00000225655 SPINK6Q6UWN8 80 aa11.14□□□□□ -0.63
PFN1-201ENST00000225655 TP73-AS1Q9UF72 201 aa11.14□□□□□ -0.63
PFN1-201ENST00000225655 BOD1L2Q8IYS8 172 aa11.13□□□□□ -0.63
PFN1-201ENST00000225655 DAND5Q8N907 189 aa11.13□□□□□ -0.63
PFN1-201ENST00000225655 PAM16Q9Y3D7 125 aa11.13□□□□□ -0.63
PFN1-201ENST00000225655 UBR4Q5T4S7 5183 aa11.12□□□□□ -0.63
PFN1-201ENST00000225655 SRSF9Q13242 221 aaKnown RBP eCLIP11.12□□□□□ -0.63
PFN1-201ENST00000225655 SPATA45Q537H7 98 aa11.12□□□□□ -0.63
PFN1-201ENST00000225655 PYY3Q5JQD4 70 aa11.12□□□□□ -0.63
PFN1-201ENST00000225655 C22orf24Q9Y442 160 aa11.12□□□□□ -0.63
PFN1-201ENST00000225655 IGLV5-37A0A075B6J1 123 aa11.11□□□□□ -0.63
PFN1-201ENST00000225655 PHF5AQ7RTV0 110 aaKnown RBP11.11□□□□□ -0.63
PFN1-201ENST00000225655 MRPL55Q7Z7F7 128 aaKnown RBP11.11□□□□□ -0.63
PFN1-201ENST00000225655 S100A12P80511 92 aa11.1□□□□□ -0.63
PFN1-201ENST00000225655 REG3GQ6UW15 175 aa11.1□□□□□ -0.63
PFN1-201ENST00000225655 Q6ZVH6 145 aa11.1□□□□□ -0.63
PFN1-201ENST00000225655 LOC107984156A0A0G2JMH3 177 aa11.09□□□□□ -0.63
PFN1-201ENST00000225655 COX8AP10176 69 aa11.09□□□□□ -0.63
PFN1-201ENST00000225655 ADAMTSL4-AS1Q5T5F5 129 aa11.09□□□□□ -0.63
PFN1-201ENST00000225655 ARL17AQ8IVW1 177 aa11.09□□□□□ -0.63
PFN1-201ENST00000225655 VPREB1P12018 145 aa11.08□□□□□ -0.64
PFN1-201ENST00000225655 KRTAP7-1Q8IUC3 87 aa11.08□□□□□ -0.64
PFN1-201ENST00000225655 LITAFQ99732 161 aa11.08□□□□□ -0.64
PFN1-201ENST00000225655 NPC2P61916 151 aa11.07□□□□□ -0.64
PFN1-201ENST00000225655 SPANXDQ9BXN6 97 aa11.07□□□□□ -0.64
PFN1-201ENST00000225655 SPANXCQ9NY87 97 aa11.07□□□□□ -0.64
PFN1-201ENST00000225655 DLEU1O43261 78 aa11.06□□□□□ -0.64
PFN1-201ENST00000225655 IFITM1P13164 125 aa11.06□□□□□ -0.64
PFN1-201ENST00000225655 LINC00308Q8TCZ7 52 aa11.06□□□□□ -0.64
PFN1-201ENST00000225655 GAGE10A6NGK3 116 aa11.05□□□□□ -0.64
PFN1-201ENST00000225655 M0R378 163 aa11.05□□□□□ -0.64
PFN1-201ENST00000225655 NDUFC2O95298 119 aa11.05□□□□□ -0.64
PFN1-201ENST00000225655 KRTAP10-8P60410 259 aa11.05□□□□□ -0.64
PFN1-201ENST00000225655 SLC25A34Q6PIV7 304 aa11.05□□□□□ -0.64
PFN1-201ENST00000225655 SPANXB1Q9NS25 103 aaPredicted RBP11.05□□□□□ -0.64
PFN1-201ENST00000225655 C14orf144Q96I85 54 aa11.04□□□□□ -0.64
PFN1-201ENST00000225655 LINC00167Q96N53 147 aa11.04□□□□□ -0.64
PFN1-201ENST00000225655 PSORS1C2Q9UIG4 136 aa11.04□□□□□ -0.64
PFN1-201ENST00000225655 NCR3O14931 201 aa11.03□□□□□ -0.64
PFN1-201ENST00000225655 TNXBP22105 4242 aa11.03□□□□□ -0.64
PFN1-201ENST00000225655 TRBV10-2A0A0K0K1G8 114 aa11.02□□□□□ -0.65
PFN1-201ENST00000225655 SMIM6P0DI80 62 aa11.02□□□□□ -0.65
PFN1-201ENST00000225655 PPDPFQ9H3Y8 114 aa11.02□□□□□ -0.65
PFN1-201ENST00000225655 RPL37AP8A6NKH3 93 aa11.01□□□□□ -0.65
PFN1-201ENST00000225655 C1orf137Q5JT78 98 aa11.01□□□□□ -0.65
PFN1-201ENST00000225655 S100A7L2Q5SY68 101 aa11□□□□□ -0.65
PFN1-201ENST00000225655 SOSTDC1Q6X4U4 206 aa11□□□□□ -0.65
PFN1-201ENST00000225655 LINC00518Q8N0U6 118 aa11□□□□□ -0.65
PFN1-201ENST00000225655 CBY1Q9Y3M2 126 aa11□□□□□ -0.65
PFN1-201ENST00000225655 IGKV2-28A0A075B6P5 120 aa10.99□□□□□ -0.65
PFN1-201ENST00000225655 IGKV2D-28P01615 120 aa10.99□□□□□ -0.65
PFN1-201ENST00000225655 Q8NDZ9 215 aa10.99□□□□□ -0.65
PFN1-201ENST00000225655 HIST1H4GQ99525 98 aa10.99□□□□□ -0.65
PFN1-201ENST00000225655 IGLV1-50A0A075B6I6 118 aa10.98□□□□□ -0.65
PFN1-201ENST00000225655 MUSTN1Q8IVN3 82 aa10.97□□□□□ -0.65
PFN1-201ENST00000225655 HIGD1BQ9P298 99 aa10.97□□□□□ -0.65
PFN1-201ENST00000225655 DDTP30046 118 aa10.96□□□□□ -0.65
PFN1-201ENST00000225655 EIF4EBP3O60516 100 aaPredicted RBP10.95□□□□□ -0.66
PFN1-201ENST00000225655 IGLV7-43P04211 117 aa10.95□□□□□ -0.66
PFN1-201ENST00000225655 UQCR10Q9UDW1 63 aa10.95□□□□□ -0.66
PFN1-201ENST00000225655 LOC105371267A0A1B0GV96 52 aa10.94□□□□□ -0.66
PFN1-201ENST00000225655 PRYO14603 147 aa10.94□□□□□ -0.66
PFN1-201ENST00000225655 BCE1O60756 84 aa10.94□□□□□ -0.66
PFN1-201ENST00000225655 KRTAP11-1Q8IUC1 163 aa10.94□□□□□ -0.66
PFN1-201ENST00000225655 OR13C6PQ8NH95 151 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms