RNA–Protein interactions for RNA: ENST00000225308.12

SLC25A39-201, Transcript of solute carrier family 25 member 39, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC25A39, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A39-201ENST00000225308 XAGE1AQ9HD64 81 aa13.63□□□□□ -0.23
SLC25A39-201ENST00000225308 KRTAP7-1Q8IUC3 87 aa13.62□□□□□ -0.23
SLC25A39-201ENST00000225308 PLA2G1BP04054 148 aaKnown RBP13.61□□□□□ -0.23
SLC25A39-201ENST00000225308 COX8AP10176 69 aa13.61□□□□□ -0.23
SLC25A39-201ENST00000225308 HERV-K104P63124 156 aa13.61□□□□□ -0.23
SLC25A39-201ENST00000225308 C14orf144Q96I85 54 aa13.61□□□□□ -0.23
SLC25A39-201ENST00000225308 ERG28Q9UKR5 140 aa13.61□□□□□ -0.23
SLC25A39-201ENST00000225308 PFN2P35080 140 aa13.6□□□□□ -0.23
SLC25A39-201ENST00000225308 RPL37AP61513 92 aaKnown RBP13.59□□□□□ -0.23
SLC25A39-201ENST00000225308 FAM19A5Q7Z5A7 132 aaPredicted RBP13.59□□□□□ -0.23
SLC25A39-201ENST00000225308 C7orf33Q8WU49 177 aa13.59□□□□□ -0.23
SLC25A39-201ENST00000225308 COX17Q14061 63 aa13.58□□□□□ -0.24
SLC25A39-201ENST00000225308 BOD1L2Q8IYS8 172 aa13.58□□□□□ -0.24
SLC25A39-201ENST00000225308 A0A0J9YXY3 114 aa13.57□□□□□ -0.24
SLC25A39-201ENST00000225308 DLEU1O43261 78 aa13.56□□□□□ -0.24
SLC25A39-201ENST00000225308 SERTAD4-AS1Q5TG53 156 aa13.56□□□□□ -0.24
SLC25A39-201ENST00000225308 SCGB1D4Q6XE38 83 aa13.56□□□□□ -0.24
SLC25A39-201ENST00000225308 PHF5AQ7RTV0 110 aaKnown RBP13.56□□□□□ -0.24
SLC25A39-201ENST00000225308 MEIG1Q5JSS6 88 aa13.55□□□□□ -0.24
SLC25A39-201ENST00000225308 SLC25A34Q6PIV7 304 aa13.55□□□□□ -0.24
SLC25A39-201ENST00000225308 TP73-AS1Q9UF72 201 aa13.55□□□□□ -0.24
SLC25A39-201ENST00000225308 PCP4L1A6NKN8 68 aa13.54□□□□□ -0.24
SLC25A39-201ENST00000225308 LINC00587B1AMM8 73 aa13.54□□□□□ -0.24
SLC25A39-201ENST00000225308 M0QXV9 152 aa13.53□□□□□ -0.24
SLC25A39-201ENST00000225308 SND1-IT1Q9HBX3 110 aa13.53□□□□□ -0.24
SLC25A39-201ENST00000225308 MYCBP2O75592 4640 aa13.52□□□□□ -0.24
SLC25A39-201ENST00000225308 SMIM13P0DJ93 91 aa13.52□□□□□ -0.25
SLC25A39-201ENST00000225308 PRO1933Q9H354 126 aa13.52□□□□□ -0.25
SLC25A39-201ENST00000225308 A0A0U1RRA0 63 aa13.51□□□□□ -0.25
SLC25A39-201ENST00000225308 LINC00158P58513 81 aa13.5□□□□□ -0.25
SLC25A39-201ENST00000225308 PRR3P79522 188 aaKnown RBP13.5□□□□□ -0.25
SLC25A39-201ENST00000225308 UQCR10Q9UDW1 63 aa13.5□□□□□ -0.25
SLC25A39-201ENST00000225308 INAFM2P0DMQ5 153 aa13.5□□□□□ -0.25
SLC25A39-201ENST00000225308 PLA2G2DQ9UNK4 145 aa13.5□□□□□ -0.25
SLC25A39-201ENST00000225308 TIMM17BO60830 172 aa13.49□□□□□ -0.25
SLC25A39-201ENST00000225308 KRTAP11-1Q8IUC1 163 aa13.49□□□□□ -0.25
SLC25A39-201ENST00000225308 HNRNPA3P51991 378 aaKnown RBP13.48□□□□□ -0.25
SLC25A39-201ENST00000225308 LITAFQ99732 161 aa13.48□□□□□ -0.25
SLC25A39-201ENST00000225308 C22orf24Q9Y442 160 aa13.48□□□□□ -0.25
SLC25A39-201ENST00000225308 TMEM238C9JI98 176 aa13.46□□□□□ -0.25
SLC25A39-201ENST00000225308 ADAMTSL4-AS1Q5T5F5 129 aa13.46□□□□□ -0.25
SLC25A39-201ENST00000225308 PSORS1C2Q9UIG4 136 aa13.46□□□□□ -0.25
SLC25A39-201ENST00000225308 MIR7-3HGQ8N6C7 128 aa13.46□□□□□ -0.26
SLC25A39-201ENST00000225308 MIEN1Q9BRT3 115 aa13.46□□□□□ -0.26
SLC25A39-201ENST00000225308 IGLV5-37A0A075B6J1 123 aa13.45□□□□□ -0.26
SLC25A39-201ENST00000225308 TSTD3H0UI37 97 aa13.45□□□□□ -0.26
SLC25A39-201ENST00000225308 C2orf91Q6ZV80 131 aa13.45□□□□□ -0.26
SLC25A39-201ENST00000225308 DAND5Q8N907 189 aa13.45□□□□□ -0.26
SLC25A39-201ENST00000225308 Q8NDZ9 215 aa13.45□□□□□ -0.26
SLC25A39-201ENST00000225308 MRPL55Q7Z7F7 128 aaKnown RBP13.44□□□□□ -0.26
SLC25A39-201ENST00000225308 HIGD1BQ9P298 99 aa13.44□□□□□ -0.26
SLC25A39-201ENST00000225308 VPREB1P12018 145 aa13.42□□□□□ -0.26
SLC25A39-201ENST00000225308 UBE2BP63146 152 aa13.42□□□□□ -0.26
SLC25A39-201ENST00000225308 SPANXDQ9BXN6 97 aa13.42□□□□□ -0.26
SLC25A39-201ENST00000225308 SPANXB1Q9NS25 103 aaPredicted RBP13.42□□□□□ -0.26
SLC25A39-201ENST00000225308 SPANXCQ9NY87 97 aa13.42□□□□□ -0.26
SLC25A39-201ENST00000225308 SRSF9Q13242 221 aaKnown RBP eCLIP13.41□□□□□ -0.26
SLC25A39-201ENST00000225308 Q6ZVH6 145 aa13.41□□□□□ -0.26
SLC25A39-201ENST00000225308 DMBT1Q9UGM3 2413 aaPredicted RBP13.41□□□□□ -0.26
SLC25A39-201ENST00000225308 PKHD1L1Q86WI1 4243 aa13.41□□□□□ -0.26
SLC25A39-201ENST00000225308 LBHQ53QV2 105 aaPredicted RBP13.4□□□□□ -0.26
SLC25A39-201ENST00000225308 NKAPP1Q8N9T2 125 aa13.4□□□□□ -0.26
SLC25A39-201ENST00000225308 NPC2P61916 151 aa13.39□□□□□ -0.27
SLC25A39-201ENST00000225308 RPL24P83731 157 aaKnown RBP13.39□□□□□ -0.27
SLC25A39-201ENST00000225308 LINC00167Q96N53 147 aa13.39□□□□□ -0.27
SLC25A39-201ENST00000225308 C1orf137Q5JT78 98 aa13.38□□□□□ -0.27
SLC25A39-201ENST00000225308 HIST1H4GQ99525 98 aa13.38□□□□□ -0.27
SLC25A39-201ENST00000225308 GAGE10A6NGK3 116 aa13.37□□□□□ -0.27
SLC25A39-201ENST00000225308 LINC00308Q8TCZ7 52 aa13.37□□□□□ -0.27
SLC25A39-201ENST00000225308 LRP1Q07954 4544 aaKnown RBP13.36□□□□□ -0.27
SLC25A39-201ENST00000225308 LOC107984156A0A0G2JMH3 177 aa13.35□□□□□ -0.27
SLC25A39-201ENST00000225308 RPL37AP8A6NKH3 93 aa13.35□□□□□ -0.27
SLC25A39-201ENST00000225308 SOSTDC1Q6X4U4 206 aa13.35□□□□□ -0.27
SLC25A39-201ENST00000225308 ARL17AQ8IVW1 177 aa13.35□□□□□ -0.27
SLC25A39-201ENST00000225308 EIF4EBP3O60516 100 aaPredicted RBP13.35□□□□□ -0.27
SLC25A39-201ENST00000225308 IFITM1P13164 125 aa13.35□□□□□ -0.27
SLC25A39-201ENST00000225308 MUSTN1Q8IVN3 82 aa13.34□□□□□ -0.27
SLC25A39-201ENST00000225308 COPS9Q8WXC6 57 aa13.34□□□□□ -0.27
SLC25A39-201ENST00000225308 TAL2Q16559 108 aa13.33□□□□□ -0.28
SLC25A39-201ENST00000225308 IGLV7-43P04211 117 aa13.31□□□□□ -0.28
SLC25A39-201ENST00000225308 PPDPFQ9H3Y8 114 aa13.31□□□□□ -0.28
SLC25A39-201ENST00000225308 IGKV2-28A0A075B6P5 120 aa13.31□□□□□ -0.28
SLC25A39-201ENST00000225308 IGKV2D-28P01615 120 aa13.31□□□□□ -0.28
SLC25A39-201ENST00000225308 DDTP30046 118 aa13.3□□□□□ -0.28
SLC25A39-201ENST00000225308 HSD52Q0P140 79 aa13.3□□□□□ -0.28
SLC25A39-201ENST00000225308 IGLV1-50A0A075B6I6 118 aa13.29□□□□□ -0.28
SLC25A39-201ENST00000225308 SPINK6Q6UWN8 80 aa13.29□□□□□ -0.28
SLC25A39-201ENST00000225308 CEND1Q8N111 149 aa13.29□□□□□ -0.28
SLC25A39-201ENST00000225308 M0R378 163 aa13.28□□□□□ -0.28
SLC25A39-201ENST00000225308 NCR3O14931 201 aa13.27□□□□□ -0.29
SLC25A39-201ENST00000225308 FAT3Q8TDW7 4589 aa13.26□□□□□ -0.29
SLC25A39-201ENST00000225308 NDUFC2O95298 119 aa13.25□□□□□ -0.29
SLC25A39-201ENST00000225308 A4D1N5 150 aa13.24□□□□□ -0.29
SLC25A39-201ENST00000225308 BCE1O60756 84 aa13.24□□□□□ -0.29
SLC25A39-201ENST00000225308 KRTAP29-1A8MX34 341 aaPredicted RBP13.23□□□□□ -0.29
SLC25A39-201ENST00000225308 TMEM126AQ9H061 195 aa13.22□□□□□ -0.29
SLC25A39-201ENST00000225308 TRBV10-2A0A0K0K1G8 114 aa13.21□□□□□ -0.29
SLC25A39-201ENST00000225308 FXYD2P54710 66 aa13.21□□□□□ -0.29
SLC25A39-201ENST00000225308 TRBV10-3A0A0K0K1G6 114 aa13.21□□□□□ -0.3
SLC25A39-201ENST00000225308 TMEM238LA0A1B0GVL6 79 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms