RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 VWFP04275 2813 aa9.01□□□□□ -0.97
SRP54-201ENST00000216774 GVQW2A0A096LPI5 108 aaPredicted RBP9.01□□□□□ -0.97
SRP54-201ENST00000216774 CYSRT1A8MQ03 144 aa9.01□□□□□ -0.97
SRP54-201ENST00000216774 IGLV6-57P01721 117 aa9.01□□□□□ -0.97
SRP54-201ENST00000216774 C6orf223Q8N319 242 aa9.01□□□□□ -0.97
SRP54-201ENST00000216774 hADV29S1A0JD25 119 aa9□□□□□ -0.97
SRP54-201ENST00000216774 LYPD5Q6UWN5 251 aa9□□□□□ -0.97
SRP54-201ENST00000216774 SERP2Q8N6R1 65 aa9□□□□□ -0.97
SRP54-201ENST00000216774 A0A087WVE0 104 aa8.99□□□□□ -0.97
SRP54-201ENST00000216774 USP17L23D6RBM5 183 aa8.99□□□□□ -0.97
SRP54-201ENST00000216774 ZNF561-AS1K7EIQ3 104 aa8.99□□□□□ -0.97
SRP54-201ENST00000216774 H3BQ85 93 aa8.98□□□□□ -0.97
SRP54-201ENST00000216774 KLK12Q9UKR0 248 aa8.98□□□□□ -0.97
SRP54-201ENST00000216774 LOC110117498A0A087WWA1 95 aa8.97□□□□□ -0.97
SRP54-201ENST00000216774 HTN3P15516 51 aa8.97□□□□□ -0.97
SRP54-201ENST00000216774 ENHOQ6UWT2 76 aa8.97□□□□□ -0.97
SRP54-201ENST00000216774 UBL5Q9BZL1 73 aa8.97□□□□□ -0.97
SRP54-201ENST00000216774 TRBV10-3A0A0K0K1G6 114 aa8.97□□□□□ -0.97
SRP54-201ENST00000216774 RBM3P98179 157 aaKnown RBP8.97□□□□□ -0.97
SRP54-201ENST00000216774 Q6ZQT0 140 aa8.96□□□□□ -0.97
SRP54-201ENST00000216774 FASNP49327 2511 aaKnown RBP8.96□□□□□ -0.98
SRP54-201ENST00000216774 C6orf48Q9UBA6 75 aa8.94□□□□□ -0.98
SRP54-201ENST00000216774 LAMTOR3Q9UHA4 124 aa8.93□□□□□ -0.98
SRP54-201ENST00000216774 TRAV23DV6A0A075B6W5 121 aa8.93□□□□□ -0.98
SRP54-201ENST00000216774 WIPF1O43516 503 aa8.93□□□□□ -0.98
SRP54-201ENST00000216774 PDE6GP18545 87 aa8.93□□□□□ -0.98
SRP54-201ENST00000216774 UPK3BQ9BT76 320 aa8.93□□□□□ -0.98
SRP54-201ENST00000216774 DIRC1Q969H9 104 aa8.92□□□□□ -0.98
SRP54-201ENST00000216774 HELZ2Q9BYK8 2649 aaKnown RBP8.92□□□□□ -0.98
SRP54-201ENST00000216774 INAFM1C9JVW0 142 aa8.92□□□□□ -0.98
SRP54-201ENST00000216774 Q6ZQY7 126 aa8.92□□□□□ -0.98
SRP54-201ENST00000216774 WFDC9Q8NEX5 89 aa8.92□□□□□ -0.98
SRP54-201ENST00000216774 DSCR8Q96T75 97 aa8.91□□□□□ -0.98
SRP54-201ENST00000216774 TRBV7-6A0A0J9YX20 115 aa8.91□□□□□ -0.98
SRP54-201ENST00000216774 H3BNG1 76 aa8.91□□□□□ -0.98
SRP54-201ENST00000216774 GHRHP01286 108 aa8.9□□□□□ -0.98
SRP54-201ENST00000216774 TENM1Q9UKZ4 2725 aa8.89□□□□□ -0.99
SRP54-201ENST00000216774 ZNF73O43830 326 aaPredicted RBP8.89□□□□□ -0.99
SRP54-201ENST00000216774 TMEM258P61165 79 aa8.89□□□□□ -0.99
SRP54-201ENST00000216774 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.89□□□□□ -0.99
SRP54-201ENST00000216774 FAM19A1Q7Z5A9 133 aa8.89□□□□□ -0.99
SRP54-201ENST00000216774 XAGE1AQ9HD64 81 aa8.89□□□□□ -0.99
SRP54-201ENST00000216774 J3KT08 172 aa8.89□□□□□ -0.99
SRP54-201ENST00000216774 CYSTM1Q9H1C7 97 aa8.89□□□□□ -0.99
SRP54-201ENST00000216774 COX7BP24311 80 aa8.88□□□□□ -0.99
SRP54-201ENST00000216774 ELOF1P60002 83 aaKnown RBP8.88□□□□□ -0.99
SRP54-201ENST00000216774 RPS28P62857 69 aaKnown RBP8.88□□□□□ -0.99
SRP54-201ENST00000216774 EGFEM1PQ0D2K5 195 aa8.88□□□□□ -0.99
SRP54-201ENST00000216774 CAMK2N2Q96S95 79 aa8.87□□□□□ -0.99
SRP54-201ENST00000216774 OTOGQ6ZRI0 2925 aa8.87□□□□□ -0.99
SRP54-201ENST00000216774 BCE1O60756 84 aa8.86□□□□□ -0.99
SRP54-201ENST00000216774 VPREB1P12018 145 aa8.86□□□□□ -0.99
SRP54-201ENST00000216774 KRTAP26-1Q6PEX3 210 aa8.86□□□□□ -0.99
SRP54-201ENST00000216774 NSD1Q96L73 2696 aaPredicted RBP8.86□□□□□ -0.99
SRP54-201ENST00000216774 LINC01547P58512 204 aaPredicted RBP8.85□□□□□ -0.99
SRP54-201ENST00000216774 WFDC10BQ8IUB3 73 aa8.85□□□□□ -0.99
SRP54-201ENST00000216774 NOTCH2Q04721 2471 aa8.85□□□□□ -0.99
SRP54-201ENST00000216774 M0R378 163 aa8.85□□□□□ -0.99
SRP54-201ENST00000216774 KPRPQ5T749 579 aaPredicted RBP8.85□□□□□ -0.99
SRP54-201ENST00000216774 Q6ZVQ6 151 aa8.85□□□□□ -0.99
SRP54-201ENST00000216774 TRBV7-4A0A0J9YYF1 115 aa8.84□□□□□ -0.99
SRP54-201ENST00000216774 HIGD2BQ4VC39 106 aa8.84□□□□□ -0.99
SRP54-201ENST00000216774 HIVEP1P15822 2718 aa8.84□□□□□ -0.99
SRP54-201ENST00000216774 M0R2N4 97 aa8.84□□□□□ -0.99
SRP54-201ENST00000216774 CXCL6P80162 114 aa8.84□□□□□ -0.99
SRP54-201ENST00000216774 NDUFC2-KCTD14E9PQ53 114 aa8.83□□□□□ -1
SRP54-201ENST00000216774 C15orf56Q8N910 161 aa8.83□□□□□ -1
SRP54-201ENST00000216774 F8WDY8 70 aa8.82□□□□□ -1
SRP54-201ENST00000216774 Q6ZRU5 148 aa8.82□□□□□ -1
SRP54-201ENST00000216774 HAMPP81172 84 aa8.82□□□□□ -1
SRP54-201ENST00000216774 LOC107984640A0A0U1RRK4 108 aa8.81□□□□□ -1
SRP54-201ENST00000216774 DPH3Q96FX2 82 aa8.8□□□□□ -1
SRP54-201ENST00000216774 LINC00528Q8N1L1 170 aa8.8□□□□□ -1
SRP54-201ENST00000216774 TEP1Q99973 2627 aaKnown RBP8.8□□□□□ -1
SRP54-201ENST00000216774 Q6ZTC4 211 aa8.79□□□□□ -1
SRP54-201ENST00000216774 TRAV7A0A075B6U4 112 aa8.79□□□□□ -1
SRP54-201ENST00000216774 C1orf43Q9BWL3 253 aa8.79□□□□□ -1
SRP54-201ENST00000216774 FLNBO75369 2602 aaKnown RBP8.78□□□□□ -1
SRP54-201ENST00000216774 ATRQ13535 2644 aa8.78□□□□□ -1
SRP54-201ENST00000216774 RETNQ9HD89 108 aa8.78□□□□□ -1
SRP54-201ENST00000216774 ESRGQ1W209 222 aa8.78□□□□□ -1
SRP54-201ENST00000216774 LINC01556Q5JQF7 62 aa8.78□□□□□ -1
SRP54-201ENST00000216774 HECTD1Q9ULT8 2610 aa8.76□□□□□ -1.01
SRP54-201ENST00000216774 Q6ZRP5 223 aa8.76□□□□□ -1.01
SRP54-201ENST00000216774 FAM19A5Q7Z5A7 132 aaPredicted RBP8.76□□□□□ -1.01
SRP54-201ENST00000216774 C20orf197Q8N268 126 aa8.75□□□□□ -1.01
SRP54-201ENST00000216774 KRTAP10-11P60412 298 aa8.74□□□□□ -1.01
SRP54-201ENST00000216774 SYCNQ0VAF6 134 aa8.74□□□□□ -1.01
SRP54-201ENST00000216774 TRRAPQ9Y4A5 3859 aa8.74□□□□□ -1.01
SRP54-201ENST00000216774 OXLD1Q5BKU9 147 aa8.74□□□□□ -1.01
SRP54-201ENST00000216774 KCNQ1DNQ9H478 68 aa8.74□□□□□ -1.01
SRP54-201ENST00000216774 IGKV2D-24A0A075B6R9 120 aa8.73□□□□□ -1.01
SRP54-201ENST00000216774 TRAV10A0A0B4J240 114 aa8.73□□□□□ -1.01
SRP54-201ENST00000216774 MAST4O15021 2626 aa8.72□□□□□ -1.01
SRP54-201ENST00000216774 KLKP1Q107X0 134 aa8.71□□□□□ -1.01
SRP54-201ENST00000216774 NKAPP1Q8N9T2 125 aa8.71□□□□□ -1.01
SRP54-201ENST00000216774 DEFB131BA0A096LNP1 70 aa8.71□□□□□ -1.02
SRP54-201ENST00000216774 DNAH10OSP0CZ25 163 aa8.7□□□□□ -1.02
SRP54-201ENST00000216774 TLX1NBP0CAT3 122 aa8.69□□□□□ -1.02
SRP54-201ENST00000216774 H7BZZ5 65 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms