RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 SCGB1D4Q6XE38 83 aa12.78□□□□□ -0.36
RHBDD3-201ENST00000216085 SND1-IT1Q9HBX3 110 aa12.77□□□□□ -0.36
RHBDD3-201ENST00000216085 MIR7-3HGQ8N6C7 128 aa12.76□□□□□ -0.37
RHBDD3-201ENST00000216085 M0R143 59 aa12.76□□□□□ -0.37
RHBDD3-201ENST00000216085 FAM19A5Q7Z5A7 132 aaPredicted RBP12.76□□□□□ -0.37
RHBDD3-201ENST00000216085 TTTY13Q9BZ97 58 aa12.76□□□□□ -0.37
RHBDD3-201ENST00000216085 A0A1W2PNN7 141 aa12.74□□□□□ -0.37
RHBDD3-201ENST00000216085 TIMM17BO60830 172 aa12.74□□□□□ -0.37
RHBDD3-201ENST00000216085 PCP2Q8IVA1 136 aa12.74□□□□□ -0.37
RHBDD3-201ENST00000216085 C7orf33Q8WU49 177 aa12.74□□□□□ -0.37
RHBDD3-201ENST00000216085 DLEU1O43261 78 aa12.74□□□□□ -0.37
RHBDD3-201ENST00000216085 FAM168BA1KXE4 195 aa12.73□□□□□ -0.37
RHBDD3-201ENST00000216085 RPL24P83731 157 aaKnown RBP12.73□□□□□ -0.37
RHBDD3-201ENST00000216085 BOD1L2Q8IYS8 172 aa12.73□□□□□ -0.37
RHBDD3-201ENST00000216085 PLA2G2DQ9UNK4 145 aa12.73□□□□□ -0.37
RHBDD3-201ENST00000216085 TMEM238C9JI98 176 aa12.72□□□□□ -0.37
RHBDD3-201ENST00000216085 KIAA1109Q2LD37 5005 aa12.72□□□□□ -0.37
RHBDD3-201ENST00000216085 RYR1P21817 5038 aa12.71□□□□□ -0.37
RHBDD3-201ENST00000216085 EPM2AB3EWF7 344 aa12.71□□□□□ -0.37
RHBDD3-201ENST00000216085 M0QXV9 152 aa12.71□□□□□ -0.37
RHBDD3-201ENST00000216085 NKAPP1Q8N9T2 125 aa12.71□□□□□ -0.38
RHBDD3-201ENST00000216085 SNHG12Q9BXW3 62 aa12.71□□□□□ -0.38
RHBDD3-201ENST00000216085 SMR3BP02814 79 aaPredicted RBP12.7□□□□□ -0.38
RHBDD3-201ENST00000216085 DAND5Q8N907 189 aa12.7□□□□□ -0.38
RHBDD3-201ENST00000216085 FAM229AH3BQW9 127 aa12.69□□□□□ -0.38
RHBDD3-201ENST00000216085 LINC00528Q8N1L1 170 aa12.69□□□□□ -0.38
RHBDD3-201ENST00000216085 HSPG2P98160 4391 aa12.69□□□□□ -0.38
RHBDD3-201ENST00000216085 SERTAD4-AS1Q5TG53 156 aa12.69□□□□□ -0.38
RHBDD3-201ENST00000216085 TP73-AS1Q9UF72 201 aa12.69□□□□□ -0.38
RHBDD3-201ENST00000216085 COPS9Q8WXC6 57 aa12.68□□□□□ -0.38
RHBDD3-201ENST00000216085 C22orf24Q9Y442 160 aa12.66□□□□□ -0.38
RHBDD3-201ENST00000216085 IGLV5-37A0A075B6J1 123 aa12.66□□□□□ -0.38
RHBDD3-201ENST00000216085 ADAMTSL4-AS1Q5T5F5 129 aa12.66□□□□□ -0.38
RHBDD3-201ENST00000216085 C2orf91Q6ZV80 131 aa12.66□□□□□ -0.38
RHBDD3-201ENST00000216085 Q6ZVH6 145 aa12.66□□□□□ -0.38
RHBDD3-201ENST00000216085 PHF5AQ7RTV0 110 aaKnown RBP12.66□□□□□ -0.38
RHBDD3-201ENST00000216085 MRPL55Q7Z7F7 128 aaKnown RBP12.66□□□□□ -0.38
RHBDD3-201ENST00000216085 Q8N1X5 172 aa12.66□□□□□ -0.38
RHBDD3-201ENST00000216085 LITAFQ99732 161 aa12.66□□□□□ -0.38
RHBDD3-201ENST00000216085 UBE2BP63146 152 aa12.65□□□□□ -0.38
RHBDD3-201ENST00000216085 LOC107984156A0A0G2JMH3 177 aa12.64□□□□□ -0.39
RHBDD3-201ENST00000216085 PLA2G1BP04054 148 aaKnown RBP12.64□□□□□ -0.39
RHBDD3-201ENST00000216085 VPREB1P12018 145 aa12.64□□□□□ -0.39
RHBDD3-201ENST00000216085 KRTAP7-1Q8IUC3 87 aa12.64□□□□□ -0.39
RHBDD3-201ENST00000216085 ARL17AQ8IVW1 177 aa12.64□□□□□ -0.39
RHBDD3-201ENST00000216085 SPANXDQ9BXN6 97 aa12.64□□□□□ -0.39
RHBDD3-201ENST00000216085 SPANXCQ9NY87 97 aa12.64□□□□□ -0.39
RHBDD3-201ENST00000216085 NPC2P61916 151 aa12.63□□□□□ -0.39
RHBDD3-201ENST00000216085 BATFQ16520 125 aa12.63□□□□□ -0.39
RHBDD3-201ENST00000216085 RPL37AP61513 92 aaKnown RBP12.62□□□□□ -0.39
RHBDD3-201ENST00000216085 Q5VSD8 79 aa12.62□□□□□ -0.39
RHBDD3-201ENST00000216085 LINC00308Q8TCZ7 52 aa12.62□□□□□ -0.39
RHBDD3-201ENST00000216085 HIGD1BQ9P298 99 aa12.62□□□□□ -0.39
RHBDD3-201ENST00000216085 IFITM1P13164 125 aa12.61□□□□□ -0.39
RHBDD3-201ENST00000216085 HINT1P49773 126 aaPredicted RBP12.61□□□□□ -0.39
RHBDD3-201ENST00000216085 SRSF9Q13242 221 aaKnown RBP eCLIP12.61□□□□□ -0.39
RHBDD3-201ENST00000216085 NDUFC2O95298 119 aa12.6□□□□□ -0.39
RHBDD3-201ENST00000216085 SPANXB1Q9NS25 103 aaPredicted RBP12.59□□□□□ -0.39
RHBDD3-201ENST00000216085 M0R378 163 aa12.58□□□□□ -0.39
RHBDD3-201ENST00000216085 HSD52Q0P140 79 aa12.58□□□□□ -0.39
RHBDD3-201ENST00000216085 COL5A1-AS1Q5SY13 56 aa12.58□□□□□ -0.39
RHBDD3-201ENST00000216085 GAGE10A6NGK3 116 aa12.58□□□□□ -0.4
RHBDD3-201ENST00000216085 SOSTDC1Q6X4U4 206 aa12.58□□□□□ -0.4
RHBDD3-201ENST00000216085 LINC00167Q96N53 147 aa12.58□□□□□ -0.4
RHBDD3-201ENST00000216085 PPDPFQ9H3Y8 114 aa12.58□□□□□ -0.4
RHBDD3-201ENST00000216085 BVES-AS1Q5T3Y7 98 aa12.57□□□□□ -0.4
RHBDD3-201ENST00000216085 NCR3O14931 201 aa12.56□□□□□ -0.4
RHBDD3-201ENST00000216085 Q8NDZ9 215 aa12.56□□□□□ -0.4
RHBDD3-201ENST00000216085 TRBV10-2A0A0K0K1G8 114 aa12.56□□□□□ -0.4
RHBDD3-201ENST00000216085 HERC2O95714 4834 aa12.55□□□□□ -0.4
RHBDD3-201ENST00000216085 FAT1Q14517 4588 aa12.55□□□□□ -0.4
RHBDD3-201ENST00000216085 RPL37AP8A6NKH3 93 aa12.54□□□□□ -0.4
RHBDD3-201ENST00000216085 PRR3P79522 188 aaKnown RBP12.54□□□□□ -0.4
RHBDD3-201ENST00000216085 HIST1H4GQ99525 98 aa12.54□□□□□ -0.4
RHBDD3-201ENST00000216085 PSORS1C2Q9UIG4 136 aa12.54□□□□□ -0.4
RHBDD3-201ENST00000216085 CBY1Q9Y3M2 126 aa12.53□□□□□ -0.4
RHBDD3-201ENST00000216085 TAL2Q16559 108 aa12.53□□□□□ -0.4
RHBDD3-201ENST00000216085 MUSTN1Q8IVN3 82 aa12.53□□□□□ -0.4
RHBDD3-201ENST00000216085 IGKV2-28A0A075B6P5 120 aa12.52□□□□□ -0.41
RHBDD3-201ENST00000216085 EIF4EBP3O60516 100 aaPredicted RBP12.52□□□□□ -0.41
RHBDD3-201ENST00000216085 IGKV2D-28P01615 120 aa12.52□□□□□ -0.41
RHBDD3-201ENST00000216085 C1orf137Q5JT78 98 aa12.52□□□□□ -0.41
RHBDD3-201ENST00000216085 S100A7L2Q5SY68 101 aa12.52□□□□□ -0.41
RHBDD3-201ENST00000216085 IGLV1-50A0A075B6I6 118 aa12.51□□□□□ -0.41
RHBDD3-201ENST00000216085 VPS13BQ7Z7G8 4022 aa12.5□□□□□ -0.41
RHBDD3-201ENST00000216085 SRRM2Q9UQ35 2752 aaKnown RBP12.48□□□□□ -0.41
RHBDD3-201ENST00000216085 A6NDN8 102 aa12.48□□□□□ -0.41
RHBDD3-201ENST00000216085 KRTAP11-1Q8IUC1 163 aa12.48□□□□□ -0.41
RHBDD3-201ENST00000216085 TRBV10-3A0A0K0K1G6 114 aa12.46□□□□□ -0.41
RHBDD3-201ENST00000216085 PRYO14603 147 aa12.46□□□□□ -0.41
RHBDD3-201ENST00000216085 REG3GQ6UW15 175 aa12.46□□□□□ -0.41
RHBDD3-201ENST00000216085 CEND1Q8N111 149 aa12.46□□□□□ -0.41
RHBDD3-201ENST00000216085 OR13C6PQ8NH95 151 aa12.46□□□□□ -0.41
RHBDD3-201ENST00000216085 KRTAP17-1Q9BYP8 105 aa12.45□□□□□ -0.42
RHBDD3-201ENST00000216085 TMEM126AQ9H061 195 aa12.45□□□□□ -0.42
RHBDD3-201ENST00000216085 BCE1O60756 84 aa12.44□□□□□ -0.42
RHBDD3-201ENST00000216085 IGLV6-57P01721 117 aa12.43□□□□□ -0.42
RHBDD3-201ENST00000216085 KRTAP10-4P60372 401 aaPredicted RBP12.43□□□□□ -0.42
RHBDD3-201ENST00000216085 KCNQ1DNQ9H478 68 aa12.43□□□□□ -0.42
RHBDD3-201ENST00000216085 IGLV7-43P04211 117 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms