RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 IGKV2D-24A0A075B6R9 120 aa5.54□□□□□ -1.52
VAMP3-201ENST00000054666 ORMDL1Q9P0S3 153 aa5.54□□□□□ -1.52
VAMP3-201ENST00000054666 C6orf48Q9UBA6 75 aa5.54□□□□□ -1.52
VAMP3-201ENST00000054666 PRB2P02812 416 aaPredicted RBP5.54□□□□□ -1.52
VAMP3-201ENST00000054666 TM2D3Q9BRN9 247 aa5.54□□□□□ -1.52
VAMP3-201ENST00000054666 MRAPQ8TCY5 172 aa5.53□□□□□ -1.52
VAMP3-201ENST00000054666 FBN1P35555 2871 aaKnown RBP5.53□□□□□ -1.52
VAMP3-201ENST00000054666 RPL18AQ02543 176 aaKnown RBP5.52□□□□□ -1.53
VAMP3-201ENST00000054666 C6orf99Q4VX62 202 aa5.52□□□□□ -1.53
VAMP3-201ENST00000054666 C2orf48Q96LS8 159 aa5.52□□□□□ -1.53
VAMP3-201ENST00000054666 K7EIL1 84 aa5.52□□□□□ -1.53
VAMP3-201ENST00000054666 DNAH10OSP0CZ25 163 aa5.52□□□□□ -1.53
VAMP3-201ENST00000054666 KRTAP26-1Q6PEX3 210 aa5.52□□□□□ -1.53
VAMP3-201ENST00000054666 A0A1B0GV72 72 aa5.51□□□□□ -1.53
VAMP3-201ENST00000054666 F8WDY8 70 aa5.51□□□□□ -1.53
VAMP3-201ENST00000054666 GAGE2BQ13066 116 aa5.51□□□□□ -1.53
VAMP3-201ENST00000054666 GAGE2EQ4V326 116 aa5.51□□□□□ -1.53
VAMP3-201ENST00000054666 C15orf56Q8N910 161 aa5.51□□□□□ -1.53
VAMP3-201ENST00000054666 Q8NDZ9 215 aa5.51□□□□□ -1.53
VAMP3-201ENST00000054666 XAGE1AQ9HD64 81 aa5.51□□□□□ -1.53
VAMP3-201ENST00000054666 GAGE2DQ9UEU5 116 aa5.51□□□□□ -1.53
VAMP3-201ENST00000054666 TTC32Q5I0X7 151 aa5.51□□□□□ -1.53
VAMP3-201ENST00000054666 GAGE2AQ6NT46 116 aa5.51□□□□□ -1.53
VAMP3-201ENST00000054666 Q6ZRU5 148 aa5.51□□□□□ -1.53
VAMP3-201ENST00000054666 Q8N814 137 aa5.51□□□□□ -1.53
VAMP3-201ENST00000054666 C22orf24Q9Y442 160 aa5.51□□□□□ -1.53
VAMP3-201ENST00000054666 IGLV6-57P01721 117 aa5.5□□□□□ -1.53
VAMP3-201ENST00000054666 SLPIP03973 132 aa5.5□□□□□ -1.53
VAMP3-201ENST00000054666 LINC00167Q96N53 147 aa5.5□□□□□ -1.53
VAMP3-201ENST00000054666 NDUFC2-KCTD14E9PQ53 114 aa5.5□□□□□ -1.53
VAMP3-201ENST00000054666 TRAV23DV6A0A075B6W5 121 aa5.49□□□□□ -1.53
VAMP3-201ENST00000054666 TMEM256-PLSCR3K7ERE1 68 aa5.49□□□□□ -1.53
VAMP3-201ENST00000054666 Q6Q795 121 aa5.49□□□□□ -1.53
VAMP3-201ENST00000054666 DIRC1Q969H9 104 aa5.49□□□□□ -1.53
VAMP3-201ENST00000054666 RMI2Q96E14 147 aa5.49□□□□□ -1.53
VAMP3-201ENST00000054666 C14orf132Q9NPU4 83 aa5.49□□□□□ -1.53
VAMP3-201ENST00000054666 SYCNQ0VAF6 134 aa5.48□□□□□ -1.53
VAMP3-201ENST00000054666 LINC00588Q9Y4M8 146 aa5.48□□□□□ -1.53
VAMP3-201ENST00000054666 HUWE1Q7Z6Z7 4374 aaKnown RBP5.48□□□□□ -1.53
VAMP3-201ENST00000054666 TENM3Q9P273 2699 aa5.48□□□□□ -1.53
VAMP3-201ENST00000054666 TRBV10-3A0A0K0K1G6 114 aa5.48□□□□□ -1.53
VAMP3-201ENST00000054666 JMJD7-PLA2G4BH0Y9G9 81 aa5.48□□□□□ -1.53
VAMP3-201ENST00000054666 LINC00575Q6W349 94 aa5.48□□□□□ -1.53
VAMP3-201ENST00000054666 BAHCC1Q9P281 2608 aa5.48□□□□□ -1.53
VAMP3-201ENST00000054666 hADV29S1A0JD25 119 aa5.47□□□□□ -1.53
VAMP3-201ENST00000054666 LINC00643Q86TS7 51 aa5.47□□□□□ -1.53
VAMP3-201ENST00000054666 OBSCN-AS1Q96MR7 158 aa5.47□□□□□ -1.53
VAMP3-201ENST00000054666 COL6A5A8TX70 2615 aa5.47□□□□□ -1.53
VAMP3-201ENST00000054666 M0R378 163 aa5.47□□□□□ -1.53
VAMP3-201ENST00000054666 VPREB1P12018 145 aa5.47□□□□□ -1.53
VAMP3-201ENST00000054666 PKD1L1Q8TDX9 2849 aa5.46□□□□□ -1.54
VAMP3-201ENST00000054666 NOTCH1P46531 2555 aa5.46□□□□□ -1.54
VAMP3-201ENST00000054666 H3BQ85 93 aa5.46□□□□□ -1.54
VAMP3-201ENST00000054666 ZNF73O43830 326 aaPredicted RBP5.46□□□□□ -1.54
VAMP3-201ENST00000054666 C9orf129Q5T035 196 aaKnown RBP5.46□□□□□ -1.54
VAMP3-201ENST00000054666 ANAPC13Q9BS18 74 aa5.46□□□□□ -1.54
VAMP3-201ENST00000054666 UPK3BQ9BT76 320 aa5.46□□□□□ -1.54
VAMP3-201ENST00000054666 TRBV7-7A0A0K0K1E9 115 aa5.45□□□□□ -1.54
VAMP3-201ENST00000054666 GHRHP01286 108 aa5.45□□□□□ -1.54
VAMP3-201ENST00000054666 Q6ZRP5 223 aa5.45□□□□□ -1.54
VAMP3-201ENST00000054666 COX7BP24311 80 aa5.44□□□□□ -1.54
VAMP3-201ENST00000054666 SDIM1Q6ZPB5 146 aa5.44□□□□□ -1.54
VAMP3-201ENST00000054666 NKAPP1Q8N9T2 125 aa5.44□□□□□ -1.54
VAMP3-201ENST00000054666 SMCR5Q8TEV8 140 aa5.44□□□□□ -1.54
VAMP3-201ENST00000054666 IMUPQ9GZP8 106 aa5.44□□□□□ -1.54
VAMP3-201ENST00000054666 TRBV7-6A0A0J9YX20 115 aa5.44□□□□□ -1.54
VAMP3-201ENST00000054666 USP17L23D6RBM5 183 aa5.44□□□□□ -1.54
VAMP3-201ENST00000054666 NDUFV3P56181 108 aaKnown RBP5.43□□□□□ -1.54
VAMP3-201ENST00000054666 ELOF1P60002 83 aaKnown RBP5.43□□□□□ -1.54
VAMP3-201ENST00000054666 Q6ZQY7 126 aa5.43□□□□□ -1.54
VAMP3-201ENST00000054666 LAMTOR3Q9UHA4 124 aa5.43□□□□□ -1.54
VAMP3-201ENST00000054666 CCKP06307 115 aa5.42□□□□□ -1.54
VAMP3-201ENST00000054666 TLX1NBP0CAT3 122 aa5.42□□□□□ -1.54
VAMP3-201ENST00000054666 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.42□□□□□ -1.54
VAMP3-201ENST00000054666 UBE2DNLQ8IWF7 75 aa5.42□□□□□ -1.54
VAMP3-201ENST00000054666 RBM3P98179 157 aaKnown RBP5.41□□□□□ -1.54
VAMP3-201ENST00000054666 DNAH1Q9P2D7 4330 aa5.4□□□□□ -1.54
VAMP3-201ENST00000054666 LINC00846Q9NV44 126 aa5.4□□□□□ -1.54
VAMP3-201ENST00000054666 C4orf48Q5BLP8 95 aa5.4□□□□□ -1.55
VAMP3-201ENST00000054666 CASC10Q5T4H9 136 aa5.4□□□□□ -1.55
VAMP3-201ENST00000054666 DSCR8Q96T75 97 aa5.4□□□□□ -1.55
VAMP3-201ENST00000054666 B9D2Q9BPU9 175 aa5.4□□□□□ -1.55
VAMP3-201ENST00000054666 MGAM2Q2M2H8 2515 aa5.39□□□□□ -1.55
VAMP3-201ENST00000054666 FAM236AA0A1B0GUQ0 79 aa5.39□□□□□ -1.55
VAMP3-201ENST00000054666 FAM236BA0A1B0GV22 79 aa5.39□□□□□ -1.55
VAMP3-201ENST00000054666 Q6JHZ5 121 aa5.39□□□□□ -1.55
VAMP3-201ENST00000054666 PLA2G2DQ9UNK4 145 aa5.39□□□□□ -1.55
VAMP3-201ENST00000054666 PDE6GP18545 87 aa5.39□□□□□ -1.55
VAMP3-201ENST00000054666 SERTAD4-AS1Q5TG53 156 aa5.39□□□□□ -1.55
VAMP3-201ENST00000054666 MDFIQ99750 246 aa5.39□□□□□ -1.55
VAMP3-201ENST00000054666 NBEAL1Q6ZS30 2694 aa5.39□□□□□ -1.55
VAMP3-201ENST00000054666 LOC110117498A0A087WWA1 95 aa5.38□□□□□ -1.55
VAMP3-201ENST00000054666 LOC107984640A0A0U1RRK4 108 aa5.38□□□□□ -1.55
VAMP3-201ENST00000054666 PSCAO43653 123 aa5.38□□□□□ -1.55
VAMP3-201ENST00000054666 LINC00528Q8N1L1 170 aa5.38□□□□□ -1.55
VAMP3-201ENST00000054666 C7orf33Q8WU49 177 aa5.38□□□□□ -1.55
VAMP3-201ENST00000054666 KCNQ1DNQ9H478 68 aa5.38□□□□□ -1.55
VAMP3-201ENST00000054666 UBL5Q9BZL1 73 aa5.38□□□□□ -1.55
VAMP3-201ENST00000054666 DNAH9Q9NYC9 4486 aa5.37□□□□□ -1.55
VAMP3-201ENST00000054666 ATP5EP2Q5VTU8 51 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms