RNA–Protein interactions for RNA: ENST00000003302.8

USP28-201, Transcript of ubiquitin specific peptidase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP28, Length 4,669 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-201ENST00000003302 Q8N814 137 aa7.21□□□□□ -1.26
USP28-201ENST00000003302 FAM110AQ9BQ89 295 aa7.21□□□□□ -1.26
USP28-201ENST00000003302 DNAH1Q9P2D7 4330 aa7.2□□□□□ -1.26
USP28-201ENST00000003302 A0A1B0GUV1 79 aa7.2□□□□□ -1.26
USP28-201ENST00000003302 C9orf153Q5TBE3 101 aa7.19□□□□□ -1.26
USP28-201ENST00000003302 CFAP161Q6P656 301 aa7.19□□□□□ -1.26
USP28-201ENST00000003302 CYSRT1A8MQ03 144 aa7.19□□□□□ -1.26
USP28-201ENST00000003302 HIST1H4AP62805 103 aaKnown RBP7.19□□□□□ -1.26
USP28-201ENST00000003302 Q8NAQ8 132 aa7.19□□□□□ -1.26
USP28-201ENST00000003302 ENHOQ6UWT2 76 aa7.19□□□□□ -1.26
USP28-201ENST00000003302 HIGD2BQ4VC39 106 aa7.18□□□□□ -1.26
USP28-201ENST00000003302 OXTP01178 125 aa7.18□□□□□ -1.26
USP28-201ENST00000003302 ACYP1P07311 99 aa7.18□□□□□ -1.26
USP28-201ENST00000003302 CD164L2Q6UWJ8 174 aa7.18□□□□□ -1.26
USP28-201ENST00000003302 INAFM2P0DMQ5 153 aa7.17□□□□□ -1.26
USP28-201ENST00000003302 C3orf22Q8N5N4 141 aa7.17□□□□□ -1.26
USP28-201ENST00000003302 TRAV23DV6A0A075B6W5 121 aa7.17□□□□□ -1.26
USP28-201ENST00000003302 A0A1B0GX51 115 aa7.17□□□□□ -1.26
USP28-201ENST00000003302 TMEM126AQ9H061 195 aa7.17□□□□□ -1.26
USP28-201ENST00000003302 ORMDL1Q9P0S3 153 aa7.17□□□□□ -1.26
USP28-201ENST00000003302 WFDC10BQ8IUB3 73 aa7.16□□□□□ -1.26
USP28-201ENST00000003302 COPS9Q8WXC6 57 aa7.16□□□□□ -1.26
USP28-201ENST00000003302 DNAH3Q8TD57 4116 aa7.16□□□□□ -1.26
USP28-201ENST00000003302 H0YGX0 51 aa7.16□□□□□ -1.26
USP28-201ENST00000003302 HUWE1Q7Z6Z7 4374 aaKnown RBP7.15□□□□□ -1.26
USP28-201ENST00000003302 C6orf48Q9UBA6 75 aa7.15□□□□□ -1.26
USP28-201ENST00000003302 DAD1P61803 113 aa7.15□□□□□ -1.26
USP28-201ENST00000003302 SPAG11BQ08648 103 aa7.15□□□□□ -1.26
USP28-201ENST00000003302 OXLD1Q5BKU9 147 aa7.15□□□□□ -1.27
USP28-201ENST00000003302 SCXQ7RTU7 201 aa7.15□□□□□ -1.27
USP28-201ENST00000003302 IMUPQ9GZP8 106 aa7.15□□□□□ -1.27
USP28-201ENST00000003302 TRBV10-3A0A0K0K1G6 114 aa7.14□□□□□ -1.27
USP28-201ENST00000003302 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.14□□□□□ -1.27
USP28-201ENST00000003302 Q6ZQY7 126 aa7.14□□□□□ -1.27
USP28-201ENST00000003302 USP17L23D6RBM5 183 aa7.14□□□□□ -1.27
USP28-201ENST00000003302 DSCR8Q96T75 97 aa7.13□□□□□ -1.27
USP28-201ENST00000003302 CCKP06307 115 aa7.13□□□□□ -1.27
USP28-201ENST00000003302 IGHV4-30-4P0DP06 118 aa7.13□□□□□ -1.27
USP28-201ENST00000003302 COX7CP15954 63 aa7.13□□□□□ -1.27
USP28-201ENST00000003302 UPK3BQ9BT76 320 aa7.13□□□□□ -1.27
USP28-201ENST00000003302 LINC00167Q96N53 147 aa7.13□□□□□ -1.27
USP28-201ENST00000003302 LINC00575Q6W349 94 aa7.12□□□□□ -1.27
USP28-201ENST00000003302 UQCRQO14949 82 aa7.12□□□□□ -1.27
USP28-201ENST00000003302 S100A7L2Q5SY68 101 aa7.12□□□□□ -1.27
USP28-201ENST00000003302 SVIPQ8NHG7 77 aa7.1□□□□□ -1.27
USP28-201ENST00000003302 Q8N9L7 120 aa7.1□□□□□ -1.27
USP28-201ENST00000003302 FRAS1Q86XX4 4008 aa7.1□□□□□ -1.27
USP28-201ENST00000003302 Q6JHZ5 121 aa7.1□□□□□ -1.27
USP28-201ENST00000003302 LYPD5Q6UWN5 251 aa7.09□□□□□ -1.27
USP28-201ENST00000003302 Q6ZTC4 211 aa7.09□□□□□ -1.27
USP28-201ENST00000003302 TRAV10A0A0B4J240 114 aa7.09□□□□□ -1.27
USP28-201ENST00000003302 CMC4P56277 68 aaPredicted RBP7.09□□□□□ -1.27
USP28-201ENST00000003302 Q6ZQT0 140 aa7.09□□□□□ -1.27
USP28-201ENST00000003302 PRB2P02812 416 aaPredicted RBP7.09□□□□□ -1.28
USP28-201ENST00000003302 PRR34Q9NV39 138 aa7.09□□□□□ -1.28
USP28-201ENST00000003302 IGLV6-57P01721 117 aa7.08□□□□□ -1.28
USP28-201ENST00000003302 KRTAP10-11P60412 298 aa7.08□□□□□ -1.28
USP28-201ENST00000003302 Q6ZRU5 148 aa7.08□□□□□ -1.28
USP28-201ENST00000003302 LYRM9A8MSI8 78 aa7.08□□□□□ -1.28
USP28-201ENST00000003302 LAMTOR3Q9UHA4 124 aa7.08□□□□□ -1.28
USP28-201ENST00000003302 NDUFC2O95298 119 aa7.07□□□□□ -1.28
USP28-201ENST00000003302 CASC10Q5T4H9 136 aa7.07□□□□□ -1.28
USP28-201ENST00000003302 KRTAP26-1Q6PEX3 210 aa7.07□□□□□ -1.28
USP28-201ENST00000003302 CRYGAP11844 174 aa7.06□□□□□ -1.28
USP28-201ENST00000003302 TMEM256-PLSCR3K7ERE1 68 aa7.06□□□□□ -1.28
USP28-201ENST00000003302 GHRHP01286 108 aa7.06□□□□□ -1.28
USP28-201ENST00000003302 C15orf56Q8N910 161 aa7.06□□□□□ -1.28
USP28-201ENST00000003302 Q6ZRP5 223 aa7.06□□□□□ -1.28
USP28-201ENST00000003302 A0A0J9YWU9 116 aa7.05□□□□□ -1.28
USP28-201ENST00000003302 HAMPP81172 84 aa7.05□□□□□ -1.28
USP28-201ENST00000003302 LELP1Q5T871 98 aa7.05□□□□□ -1.28
USP28-201ENST00000003302 SMIM9A6NGZ8 99 aa7.05□□□□□ -1.28
USP28-201ENST00000003302 J3QKU1 62 aa7.04□□□□□ -1.28
USP28-201ENST00000003302 COX17Q14061 63 aa7.04□□□□□ -1.28
USP28-201ENST00000003302 ESRGQ1W209 222 aa7.04□□□□□ -1.28
USP28-201ENST00000003302 FAM19A5Q7Z5A7 132 aaPredicted RBP7.04□□□□□ -1.28
USP28-201ENST00000003302 A0A0G2JQZ4 141 aa7.04□□□□□ -1.28
USP28-201ENST00000003302 A0A1W2PNN7 141 aa7.04□□□□□ -1.28
USP28-201ENST00000003302 FAM168BA1KXE4 195 aa7.04□□□□□ -1.28
USP28-201ENST00000003302 ATOX1O00244 68 aa7.04□□□□□ -1.28
USP28-201ENST00000003302 PLECQ15149 4684 aaKnown RBP7.04□□□□□ -1.28
USP28-201ENST00000003302 C9orf66Q5T8R8 295 aa7.04□□□□□ -1.28
USP28-201ENST00000003302 Q6ZVQ6 151 aa7.04□□□□□ -1.28
USP28-201ENST00000003302 C20orf197Q8N268 126 aa7.04□□□□□ -1.28
USP28-201ENST00000003302 LINC01547P58512 204 aaPredicted RBP7.04□□□□□ -1.28
USP28-201ENST00000003302 RBM3P98179 157 aaKnown RBP7.04□□□□□ -1.28
USP28-201ENST00000003302 KPRPQ5T749 579 aaPredicted RBP7.04□□□□□ -1.28
USP28-201ENST00000003302 SERP2Q8N6R1 65 aa7.04□□□□□ -1.28
USP28-201ENST00000003302 SPART-AS1P0CW21 52 aa7.03□□□□□ -1.28
USP28-201ENST00000003302 VPREB1P12018 145 aa7.03□□□□□ -1.28
USP28-201ENST00000003302 SNURFQ9Y675 71 aa7.03□□□□□ -1.28
USP28-201ENST00000003302 SERTAD4-AS1Q5TG53 156 aa7.03□□□□□ -1.28
USP28-201ENST00000003302 ZNF73O43830 326 aaPredicted RBP7.02□□□□□ -1.29
USP28-201ENST00000003302 JMJD7-PLA2G4BH0Y9G9 81 aa7.01□□□□□ -1.29
USP28-201ENST00000003302 MUC7Q8TAX7 377 aa7.01□□□□□ -1.29
USP28-201ENST00000003302 CAMK2N2Q96S95 79 aa7.01□□□□□ -1.29
USP28-201ENST00000003302 DPH3Q96FX2 82 aa7.01□□□□□ -1.29
USP28-201ENST00000003302 MIFP14174 115 aa7□□□□□ -1.29
USP28-201ENST00000003302 TM2D3Q9BRN9 247 aa7□□□□□ -1.29
USP28-201ENST00000003302 APOC4P55056 127 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms