RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 C5orf42Q9H799 3197 aa2.89□□□□□ -1.95
CFTR-201ENST00000003084 IGHV6-1A0A0B4J1U7 121 aa2.89□□□□□ -1.95
CFTR-201ENST00000003084 LINC00337Q8N6G1 96 aa2.89□□□□□ -1.95
CFTR-201ENST00000003084 SERP2Q8N6R1 65 aa2.89□□□□□ -1.95
CFTR-201ENST00000003084 ANKHD1Q8IWZ3 2542 aaKnown RBP2.89□□□□□ -1.95
CFTR-201ENST00000003084 PRUNE2Q8WUY3 3088 aa2.89□□□□□ -1.95
CFTR-201ENST00000003084 MT-ATP8P03928 68 aa2.89□□□□□ -1.95
CFTR-201ENST00000003084 SPTBN2O15020 2390 aa2.89□□□□□ -1.95
CFTR-201ENST00000003084 WNK2Q9Y3S1 2297 aa2.89□□□□□ -1.95
CFTR-201ENST00000003084 HCFC1P51610 2035 aa2.89□□□□□ -1.95
CFTR-201ENST00000003084 IGLV6-57P01721 117 aa2.89□□□□□ -1.95
CFTR-201ENST00000003084 Q8N9L7 120 aa2.89□□□□□ -1.95
CFTR-201ENST00000003084 TM2D3Q9BRN9 247 aa2.89□□□□□ -1.95
CFTR-201ENST00000003084 ROS1P08922 2347 aa2.89□□□□□ -1.95
CFTR-201ENST00000003084 Q6Q795 121 aa2.89□□□□□ -1.95
CFTR-201ENST00000003084 SERP1Q9Y6X1 66 aa2.89□□□□□ -1.95
CFTR-201ENST00000003084 LINC00336Q6ZUF6 198 aa2.88□□□□□ -1.95
CFTR-201ENST00000003084 BOD1L1Q8NFC6 3051 aa2.88□□□□□ -1.95
CFTR-201ENST00000003084 ELOF1P60002 83 aaKnown RBP2.88□□□□□ -1.95
CFTR-201ENST00000003084 C1orf195Q5TG92 126 aa2.88□□□□□ -1.95
CFTR-201ENST00000003084 POLEQ07864 2286 aa2.88□□□□□ -1.95
CFTR-201ENST00000003084 PRLHP81277 87 aa2.88□□□□□ -1.95
CFTR-201ENST00000003084 KRTAP1-1Q07627 177 aa2.88□□□□□ -1.95
CFTR-201ENST00000003084 GVINP1Q7Z2Y8 2422 aa2.88□□□□□ -1.95
CFTR-201ENST00000003084 C20orf197Q8N268 126 aa2.88□□□□□ -1.95
CFTR-201ENST00000003084 LINC00612Q8N6U2 182 aa2.88□□□□□ -1.95
CFTR-201ENST00000003084 FAM30AQ9NZY2 134 aa2.88□□□□□ -1.95
CFTR-201ENST00000003084 PRR14LQ5THK1 2151 aa2.88□□□□□ -1.95
CFTR-201ENST00000003084 SPTBN1Q01082 2364 aaKnown RBP2.88□□□□□ -1.95
CFTR-201ENST00000003084 BCE1O60756 84 aa2.87□□□□□ -1.95
CFTR-201ENST00000003084 TRAV7A0A075B6U4 112 aa2.87□□□□□ -1.95
CFTR-201ENST00000003084 RPL37AP61513 92 aaKnown RBP2.87□□□□□ -1.95
CFTR-201ENST00000003084 CRYGAP11844 174 aa2.87□□□□□ -1.95
CFTR-201ENST00000003084 PRRC2AP48634 2157 aaKnown RBP2.87□□□□□ -1.95
CFTR-201ENST00000003084 A0A087WSZ3 146 aa2.86□□□□□ -1.95
CFTR-201ENST00000003084 CXCL6P80162 114 aa2.86□□□□□ -1.95
CFTR-201ENST00000003084 RELNP78509 3460 aa2.86□□□□□ -1.95
CFTR-201ENST00000003084 SMIM26A0A096LP01 95 aa2.86□□□□□ -1.95
CFTR-201ENST00000003084 CFAP47Q6ZTR5 3102 aa2.86□□□□□ -1.95
CFTR-201ENST00000003084 PCNX1Q96RV3 2341 aa2.86□□□□□ -1.95
CFTR-201ENST00000003084 HCG22E2RYF7 251 aa2.86□□□□□ -1.95
CFTR-201ENST00000003084 KIAA0087Q14695 138 aa2.86□□□□□ -1.95
CFTR-201ENST00000003084 PHF5AQ7RTV0 110 aaKnown RBP2.86□□□□□ -1.95
CFTR-201ENST00000003084 TYMSOSQ8TAI1 123 aa2.86□□□□□ -1.95
CFTR-201ENST00000003084 Q6ZRX8 168 aa2.86□□□□□ -1.95
CFTR-201ENST00000003084 COX7CP15954 63 aa2.86□□□□□ -1.95
CFTR-201ENST00000003084 PRR4Q16378 134 aa2.86□□□□□ -1.95
CFTR-201ENST00000003084 DCHS1Q96JQ0 3298 aa2.86□□□□□ -1.95
CFTR-201ENST00000003084 ASPMQ8IZT6 3477 aa2.85□□□□□ -1.95
CFTR-201ENST00000003084 AKAP6Q13023 2319 aa2.85□□□□□ -1.95
CFTR-201ENST00000003084 NACAE9PAV3 2078 aa2.85□□□□□ -1.95
CFTR-201ENST00000003084 LCE2BO14633 110 aa2.85□□□□□ -1.95
CFTR-201ENST00000003084 TP53AIP1Q9HCN2 124 aa2.85□□□□□ -1.95
CFTR-201ENST00000003084 EPM2AB3EWF7 344 aa2.85□□□□□ -1.95
CFTR-201ENST00000003084 MOBPQ13875 183 aa2.85□□□□□ -1.95
CFTR-201ENST00000003084 ZNF575Q86XF7 245 aa2.85□□□□□ -1.95
CFTR-201ENST00000003084 APLNQ9ULZ1 77 aa2.85□□□□□ -1.95
CFTR-201ENST00000003084 LOC110117498A0A087WWA1 95 aa2.84□□□□□ -1.95
CFTR-201ENST00000003084 FAM208BQ5VWN6 2430 aa2.84□□□□□ -1.95
CFTR-201ENST00000003084 ABCA1O95477 2261 aa2.84□□□□□ -1.96
CFTR-201ENST00000003084 CACNA1GO43497 2377 aa2.84□□□□□ -1.96
CFTR-201ENST00000003084 TLX1NBP0CAT3 122 aa2.84□□□□□ -1.96
CFTR-201ENST00000003084 PRR34Q9NV39 138 aa2.84□□□□□ -1.96
CFTR-201ENST00000003084 H0Y9P7 68 aa2.84□□□□□ -1.96
CFTR-201ENST00000003084 GIG44P09565 113 aaPredicted RBP2.83□□□□□ -1.96
CFTR-201ENST00000003084 hDV103S1A0JD37 113 aa2.83□□□□□ -1.96
CFTR-201ENST00000003084 C8orf87E5RJ46 101 aa2.83□□□□□ -1.96
CFTR-201ENST00000003084 IGLV1-50A0A075B6I6 118 aa2.83□□□□□ -1.96
CFTR-201ENST00000003084 A0A087WTM6 91 aa2.83□□□□□ -1.96
CFTR-201ENST00000003084 SPAG11AQ6PDA7 123 aa2.83□□□□□ -1.96
CFTR-201ENST00000003084 LINC00208Q96KT6 92 aa2.83□□□□□ -1.96
CFTR-201ENST00000003084 SPACA4Q8TDM5 124 aa2.82□□□□□ -1.96
CFTR-201ENST00000003084 TTC28Q96AY4 2481 aa2.82□□□□□ -1.96
CFTR-201ENST00000003084 ADGRG4Q8IZF6 3080 aa2.82□□□□□ -1.96
CFTR-201ENST00000003084 CUL9Q8IWT3 2517 aa2.82□□□□□ -1.96
CFTR-201ENST00000003084 RETNLBQ9BQ08 111 aa2.82□□□□□ -1.96
CFTR-201ENST00000003084 KCNQ1DNQ9H478 68 aa2.82□□□□□ -1.96
CFTR-201ENST00000003084 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.82□□□□□ -1.96
CFTR-201ENST00000003084 PLCE1Q9P212 2302 aa2.82□□□□□ -1.96
CFTR-201ENST00000003084 H3BPC8 53 aa2.81□□□□□ -1.96
CFTR-201ENST00000003084 LINC00313P59037 77 aa2.81□□□□□ -1.96
CFTR-201ENST00000003084 ARHGAP32A7KAX9 2087 aa2.81□□□□□ -1.96
CFTR-201ENST00000003084 CHD7Q9P2D1 2997 aa2.81□□□□□ -1.96
CFTR-201ENST00000003084 SOSTDC1Q6X4U4 206 aa2.81□□□□□ -1.96
CFTR-201ENST00000003084 CHTF8P0CG12 524 aa2.81□□□□□ -1.96
CFTR-201ENST00000003084 C15orf56Q8N910 161 aa2.81□□□□□ -1.96
CFTR-201ENST00000003084 Q9UF83 564 aa2.81□□□□□ -1.96
CFTR-201ENST00000003084 CNBPP62633 177 aaKnown RBP2.81□□□□□ -1.96
CFTR-201ENST00000003084 DEFB116Q30KQ4 102 aa2.81□□□□□ -1.96
CFTR-201ENST00000003084 TRBV7-4A0A0J9YYF1 115 aa2.81□□□□□ -1.96
CFTR-201ENST00000003084 IGLV8-61A0A075B6I0 122 aa2.8□□□□□ -1.96
CFTR-201ENST00000003084 Q6ZQT0 140 aa2.8□□□□□ -1.96
CFTR-201ENST00000003084 SSBP3-AS1Q7Z2R9 100 aa2.8□□□□□ -1.96
CFTR-201ENST00000003084 LINC00846Q9NV44 126 aa2.8□□□□□ -1.96
CFTR-201ENST00000003084 TRBV7-7A0A0K0K1E9 115 aa2.8□□□□□ -1.96
CFTR-201ENST00000003084 LITAFQ99732 161 aa2.8□□□□□ -1.96
CFTR-201ENST00000003084 ZNF861PO60384 105 aa2.8□□□□□ -1.96
CFTR-201ENST00000003084 C9orf163Q8N9P6 203 aa2.8□□□□□ -1.96
CFTR-201ENST00000003084 ATP11AUNQ6ZP68 121 aa2.79□□□□□ -1.96
CFTR-201ENST00000003084 C7orf65Q6ZTY9 151 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms