RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 GAGE12HA6NDE8 117 aa6.51□□□□□ -1.37
PHGDH-222ENST00000641587 JOSD1Q15040 202 aaPredicted RBP6.51□□□□□ -1.37
PHGDH-222ENST00000641587 LINC00242Q5T6M2 205 aa6.51□□□□□ -1.37
PHGDH-222ENST00000641587 TNXBP22105 4242 aa6.51□□□□□ -1.37
PHGDH-222ENST00000641587 LRP2P98164 4655 aa6.5□□□□□ -1.37
PHGDH-222ENST00000641587 H3BRM9 83 aa6.5□□□□□ -1.37
PHGDH-222ENST00000641587 COX6A2Q02221 97 aa6.5□□□□□ -1.37
PHGDH-222ENST00000641587 HSBP1L1C9JCN9 74 aa6.49□□□□□ -1.37
PHGDH-222ENST00000641587 ZNF22P17026 224 aaPredicted RBP6.49□□□□□ -1.37
PHGDH-222ENST00000641587 MALP21145 153 aa6.49□□□□□ -1.37
PHGDH-222ENST00000641587 HERVK_113P61574 105 aa6.49□□□□□ -1.37
PHGDH-222ENST00000641587 PYY3Q5JQD4 70 aa6.49□□□□□ -1.37
PHGDH-222ENST00000641587 CD164L2Q6UWJ8 174 aa6.49□□□□□ -1.37
PHGDH-222ENST00000641587 FAM19A3Q7Z5A8 133 aa6.49□□□□□ -1.37
PHGDH-222ENST00000641587 C5orf38Q86SI9 138 aa6.49□□□□□ -1.37
PHGDH-222ENST00000641587 CDKN2A-AS1Q9UH64 79 aa6.49□□□□□ -1.37
PHGDH-222ENST00000641587 RNF213Q63HN8 5207 aa6.49□□□□□ -1.37
PHGDH-222ENST00000641587 IGHV3-64A0A075B6Q5 118 aa6.48□□□□□ -1.37
PHGDH-222ENST00000641587 COX7A2LO14548 114 aa6.48□□□□□ -1.37
PHGDH-222ENST00000641587 SPINK8P0C7L1 97 aa6.48□□□□□ -1.37
PHGDH-222ENST00000641587 RPL37AP61513 92 aaKnown RBP6.48□□□□□ -1.37
PHGDH-222ENST00000641587 IGLV5-45A0A087WSX0 123 aa6.47□□□□□ -1.37
PHGDH-222ENST00000641587 hDV102S1A0JD36 115 aa6.47□□□□□ -1.37
PHGDH-222ENST00000641587 SMIM6P0DI80 62 aa6.47□□□□□ -1.37
PHGDH-222ENST00000641587 MT1HL1P0DM35 61 aa6.47□□□□□ -1.37
PHGDH-222ENST00000641587 FOXI1Q12951 378 aa6.47□□□□□ -1.37
PHGDH-222ENST00000641587 STPG4Q8N801 248 aa6.47□□□□□ -1.37
PHGDH-222ENST00000641587 VAMP8Q9BV40 100 aa6.47□□□□□ -1.37
PHGDH-222ENST00000641587 COX11Q9Y6N1 276 aa6.47□□□□□ -1.37
PHGDH-222ENST00000641587 A0A087WZ39 114 aa6.46□□□□□ -1.38
PHGDH-222ENST00000641587 IGHV3OR16-9A0A0B4J2B5 98 aa6.46□□□□□ -1.38
PHGDH-222ENST00000641587 MAJINQ3KP22 176 aa6.46□□□□□ -1.38
PHGDH-222ENST00000641587 TMEM223A0PJW6 202 aa6.45□□□□□ -1.38
PHGDH-222ENST00000641587 SMIM1B2RUZ4 78 aa6.45□□□□□ -1.38
PHGDH-222ENST00000641587 APOMO95445 188 aa6.45□□□□□ -1.38
PHGDH-222ENST00000641587 S100A12P80511 92 aa6.45□□□□□ -1.38
PHGDH-222ENST00000641587 KRTAP26-1Q6PEX3 210 aa6.45□□□□□ -1.38
PHGDH-222ENST00000641587 TOMM7Q9P0U1 55 aa6.45□□□□□ -1.38
PHGDH-222ENST00000641587 PAM16Q9Y3D7 125 aa6.45□□□□□ -1.38
PHGDH-222ENST00000641587 PRSS2P07478 247 aa6.44□□□□□ -1.38
PHGDH-222ENST00000641587 NMUP48645 174 aa6.44□□□□□ -1.38
PHGDH-222ENST00000641587 ORAOV1Q8WV07 137 aa6.44□□□□□ -1.38
PHGDH-222ENST00000641587 IGHV1-58A0A0C4DH39 117 aa6.43□□□□□ -1.38
PHGDH-222ENST00000641587 PANO1I0J062 215 aa6.43□□□□□ -1.38
PHGDH-222ENST00000641587 LGALS3P17931 250 aaKnown RBP6.43□□□□□ -1.38
PHGDH-222ENST00000641587 SPAG11BQ08648 103 aa6.43□□□□□ -1.38
PHGDH-222ENST00000641587 SPATA45Q537H7 98 aa6.43□□□□□ -1.38
PHGDH-222ENST00000641587 ANKRD39Q53RE8 183 aa6.43□□□□□ -1.38
PHGDH-222ENST00000641587 CFAP161Q6P656 301 aa6.43□□□□□ -1.38
PHGDH-222ENST00000641587 LINC01561Q8N1V8 128 aa6.43□□□□□ -1.38
PHGDH-222ENST00000641587 PLEKHB2Q96CS7 222 aa6.43□□□□□ -1.38
PHGDH-222ENST00000641587 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.43□□□□□ -1.38
PHGDH-222ENST00000641587 USP17L23D6RBM5 183 aa6.42□□□□□ -1.38
PHGDH-222ENST00000641587 E9PLD3 99 aa6.42□□□□□ -1.38
PHGDH-222ENST00000641587 LEPROTO15243 131 aa6.42□□□□□ -1.38
PHGDH-222ENST00000641587 HIGD2BQ4VC39 106 aa6.42□□□□□ -1.38
PHGDH-222ENST00000641587 COX7B2Q8TF08 81 aa6.42□□□□□ -1.38
PHGDH-222ENST00000641587 C12orf57Q99622 126 aa6.42□□□□□ -1.38
PHGDH-222ENST00000641587 IGKV2D-26A0A0A0MRZ7 120 aa6.41□□□□□ -1.38
PHGDH-222ENST00000641587 IGLV5-39A0A0G2JS06 123 aa6.41□□□□□ -1.38
PHGDH-222ENST00000641587 J3QQQ9 107 aa6.41□□□□□ -1.38
PHGDH-222ENST00000641587 ZNF561-AS1K7EIQ3 104 aa6.41□□□□□ -1.38
PHGDH-222ENST00000641587 C6orf226Q5I0X4 101 aa6.41□□□□□ -1.38
PHGDH-222ENST00000641587 TSPEAR-AS2P59090 65 aa6.4□□□□□ -1.38
PHGDH-222ENST00000641587 CKS1BP61024 79 aa6.4□□□□□ -1.38
PHGDH-222ENST00000641587 Q8IZM0 81 aa6.4□□□□□ -1.38
PHGDH-222ENST00000641587 C15orf56Q8N910 161 aa6.4□□□□□ -1.38
PHGDH-222ENST00000641587 LINC00526Q96FQ7 95 aa6.4□□□□□ -1.38
PHGDH-222ENST00000641587 GVQW2A0A096LPI5 108 aaPredicted RBP6.39□□□□□ -1.39
PHGDH-222ENST00000641587 ZNF815PA8K554 130 aa6.39□□□□□ -1.39
PHGDH-222ENST00000641587 C14orf177Q52M58 125 aa6.39□□□□□ -1.39
PHGDH-222ENST00000641587 TTTY13Q9BZ97 58 aa6.39□□□□□ -1.39
PHGDH-222ENST00000641587 NDUFA12Q9UI09 145 aa6.39□□□□□ -1.39
PHGDH-222ENST00000641587 CXCL5P42830 114 aa6.38□□□□□ -1.39
PHGDH-222ENST00000641587 PCP2Q8IVA1 136 aa6.38□□□□□ -1.39
PHGDH-222ENST00000641587 LINC00518Q8N0U6 118 aa6.38□□□□□ -1.39
PHGDH-222ENST00000641587 C14orf144Q96I85 54 aa6.38□□□□□ -1.39
PHGDH-222ENST00000641587 CAMK2N2Q96S95 79 aa6.38□□□□□ -1.39
PHGDH-222ENST00000641587 MYMXA0A1B0GTQ4 84 aa6.37□□□□□ -1.39
PHGDH-222ENST00000641587 NDUFA1O15239 70 aa6.37□□□□□ -1.39
PHGDH-222ENST00000641587 C2orf82Q6UX34 121 aa6.37□□□□□ -1.39
PHGDH-222ENST00000641587 C9orf163Q8N9P6 203 aa6.37□□□□□ -1.39
PHGDH-222ENST00000641587 PRO1933Q9H354 126 aa6.37□□□□□ -1.39
PHGDH-222ENST00000641587 COX8AP10176 69 aa6.36□□□□□ -1.39
PHGDH-222ENST00000641587 KIAA0087Q14695 138 aa6.36□□□□□ -1.39
PHGDH-222ENST00000641587 MEIG1Q5JSS6 88 aa6.36□□□□□ -1.39
PHGDH-222ENST00000641587 SLC25A34Q6PIV7 304 aa6.36□□□□□ -1.39
PHGDH-222ENST00000641587 SCGB1D4Q6XE38 83 aa6.36□□□□□ -1.39
PHGDH-222ENST00000641587 Q6ZRU5 148 aa6.36□□□□□ -1.39
PHGDH-222ENST00000641587 ZNF625Q96I27 306 aaPredicted RBP6.36□□□□□ -1.39
PHGDH-222ENST00000641587 CHTF8P0CG12 524 aa6.35□□□□□ -1.39
PHGDH-222ENST00000641587 HERV-K104P63124 156 aa6.35□□□□□ -1.39
PHGDH-222ENST00000641587 SYCNQ0VAF6 134 aa6.35□□□□□ -1.39
PHGDH-222ENST00000641587 SFTA2Q6UW10 78 aa6.35□□□□□ -1.39
PHGDH-222ENST00000641587 UNQ6190/PRO20217Q6UXQ8 127 aa6.35□□□□□ -1.39
PHGDH-222ENST00000641587 SDIM1Q6ZPB5 146 aa6.35□□□□□ -1.39
PHGDH-222ENST00000641587 C2orf48Q96LS8 159 aa6.35□□□□□ -1.39
PHGDH-222ENST00000641587 CARD19Q96LW7 228 aa6.35□□□□□ -1.39
PHGDH-222ENST00000641587 TP73-AS1Q9UF72 201 aa6.35□□□□□ -1.39
PHGDH-222ENST00000641587 F8WDY8 70 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms