RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 E9PLD3 99 aa8.52□□□□□ -1.05
PHGDH-218ENST00000641491 J3QQQ9 107 aa8.52□□□□□ -1.05
PHGDH-218ENST00000641491 MEIG1Q5JSS6 88 aa8.52□□□□□ -1.05
PHGDH-218ENST00000641491 CDPF1Q6NVV7 123 aa8.52□□□□□ -1.05
PHGDH-218ENST00000641491 STPG4Q8N801 248 aa8.52□□□□□ -1.05
PHGDH-218ENST00000641491 IGLV5-39A0A0G2JS06 123 aa8.51□□□□□ -1.05
PHGDH-218ENST00000641491 LINC00587B1AMM8 73 aa8.51□□□□□ -1.05
PHGDH-218ENST00000641491 WFDC2Q14508 124 aa8.51□□□□□ -1.05
PHGDH-218ENST00000641491 LINC00526Q96FQ7 95 aa8.51□□□□□ -1.05
PHGDH-218ENST00000641491 PGPEP1Q9NXJ5 209 aa8.51□□□□□ -1.05
PHGDH-218ENST00000641491 NDUFA12Q9UI09 145 aa8.51□□□□□ -1.05
PHGDH-218ENST00000641491 TRBV30A0A0K0K1B3 111 aa8.5□□□□□ -1.05
PHGDH-218ENST00000641491 HERV-K104P63124 156 aa8.5□□□□□ -1.05
PHGDH-218ENST00000641491 CNBPP62633 177 aaKnown RBP8.49□□□□□ -1.05
PHGDH-218ENST00000641491 CIRBPQ14011 172 aaKnown RBP8.49□□□□□ -1.05
PHGDH-218ENST00000641491 SCGB1D4Q6XE38 83 aa8.49□□□□□ -1.05
PHGDH-218ENST00000641491 PAM16Q9Y3D7 125 aa8.49□□□□□ -1.05
PHGDH-218ENST00000641491 ZNF815PA8K554 130 aa8.48□□□□□ -1.05
PHGDH-218ENST00000641491 GCSHP23434 173 aa8.48□□□□□ -1.05
PHGDH-218ENST00000641491 RPL18AQ02543 176 aaKnown RBP8.48□□□□□ -1.05
PHGDH-218ENST00000641491 SPATA45Q537H7 98 aa8.48□□□□□ -1.05
PHGDH-218ENST00000641491 C2orf82Q6UX34 121 aa8.48□□□□□ -1.05
PHGDH-218ENST00000641491 SMIM6P0DI80 62 aa8.47□□□□□ -1.05
PHGDH-218ENST00000641491 UNQ6190/PRO20217Q6UXQ8 127 aa8.47□□□□□ -1.05
PHGDH-218ENST00000641491 Q6ZRU5 148 aa8.47□□□□□ -1.05
PHGDH-218ENST00000641491 DNAH10Q8IVF4 4471 aa8.46□□□□□ -1.05
PHGDH-218ENST00000641491 LOC107984640A0A0U1RRK4 108 aa8.46□□□□□ -1.06
PHGDH-218ENST00000641491 KIAA0087Q14695 138 aa8.46□□□□□ -1.06
PHGDH-218ENST00000641491 RNF151Q2KHN1 245 aa8.46□□□□□ -1.06
PHGDH-218ENST00000641491 PYY3Q5JQD4 70 aa8.46□□□□□ -1.06
PHGDH-218ENST00000641491 DPH3Q96FX2 82 aa8.46□□□□□ -1.06
PHGDH-218ENST00000641491 ZNF625Q96I27 306 aaPredicted RBP8.46□□□□□ -1.06
PHGDH-218ENST00000641491 C16orf90A8MZG2 172 aa8.45□□□□□ -1.06
PHGDH-218ENST00000641491 LINC00158P58513 81 aa8.45□□□□□ -1.06
PHGDH-218ENST00000641491 ANKRD39Q53RE8 183 aa8.45□□□□□ -1.06
PHGDH-218ENST00000641491 PFN2P35080 140 aa8.44□□□□□ -1.06
PHGDH-218ENST00000641491 MIEN1Q9BRT3 115 aa8.44□□□□□ -1.06
PHGDH-218ENST00000641491 LINC00474Q9P2X8 69 aa8.44□□□□□ -1.06
PHGDH-218ENST00000641491 ERG28Q9UKR5 140 aa8.44□□□□□ -1.06
PHGDH-218ENST00000641491 ABCA13Q86UQ4 5058 aa8.44□□□□□ -1.06
PHGDH-218ENST00000641491 TSPEAR-AS2P59090 65 aa8.43□□□□□ -1.06
PHGDH-218ENST00000641491 GAGE2BQ13066 116 aa8.43□□□□□ -1.06
PHGDH-218ENST00000641491 COX17Q14061 63 aa8.43□□□□□ -1.06
PHGDH-218ENST00000641491 MAJINQ3KP22 176 aa8.43□□□□□ -1.06
PHGDH-218ENST00000641491 C9orf163Q8N9P6 203 aa8.43□□□□□ -1.06
PHGDH-218ENST00000641491 COPS9Q8WXC6 57 aa8.43□□□□□ -1.06
PHGDH-218ENST00000641491 C6orf48Q9UBA6 75 aa8.43□□□□□ -1.06
PHGDH-218ENST00000641491 TMEM238C9JI98 176 aa8.42□□□□□ -1.06
PHGDH-218ENST00000641491 NDUFC2-KCTD14E9PQ53 114 aa8.42□□□□□ -1.06
PHGDH-218ENST00000641491 GAGE2EQ4V326 116 aa8.42□□□□□ -1.06
PHGDH-218ENST00000641491 C10orf25Q5T742 122 aa8.42□□□□□ -1.06
PHGDH-218ENST00000641491 GAGE2DQ9UEU5 116 aa8.42□□□□□ -1.06
PHGDH-218ENST00000641491 IGKV2D-26A0A0A0MRZ7 120 aa8.41□□□□□ -1.06
PHGDH-218ENST00000641491 IGKV2-24A0A0C4DH68 120 aa8.41□□□□□ -1.06
PHGDH-218ENST00000641491 A0A0U1RRA0 63 aa8.41□□□□□ -1.06
PHGDH-218ENST00000641491 LOC105371267A0A1B0GV96 52 aa8.41□□□□□ -1.06
PHGDH-218ENST00000641491 KRTAP10-2P60368 255 aa8.41□□□□□ -1.06
PHGDH-218ENST00000641491 SLC25A34Q6PIV7 304 aa8.41□□□□□ -1.06
PHGDH-218ENST00000641491 C9orf116Q5BN46 136 aaPredicted RBP8.4□□□□□ -1.06
PHGDH-218ENST00000641491 SLPIP03973 132 aa8.39□□□□□ -1.07
PHGDH-218ENST00000641491 SMIM13P0DJ93 91 aa8.39□□□□□ -1.07
PHGDH-218ENST00000641491 COX8AP10176 69 aa8.39□□□□□ -1.07
PHGDH-218ENST00000641491 FUSP35637 526 aaKnown RBP eCLIP8.39□□□□□ -1.07
PHGDH-218ENST00000641491 PCP2Q8IVA1 136 aa8.39□□□□□ -1.07
PHGDH-218ENST00000641491 A0A0J9YXY3 114 aa8.38□□□□□ -1.07
PHGDH-218ENST00000641491 TLX1NBP0CAT3 122 aa8.38□□□□□ -1.07
PHGDH-218ENST00000641491 SRSF9Q13242 221 aaKnown RBP eCLIP8.38□□□□□ -1.07
PHGDH-218ENST00000641491 LINC01620Q4KN68 170 aa8.38□□□□□ -1.07
PHGDH-218ENST00000641491 C14orf144Q96I85 54 aa8.38□□□□□ -1.07
PHGDH-218ENST00000641491 DNAH2Q9P225 4427 aa8.38□□□□□ -1.07
PHGDH-218ENST00000641491 PTTG1IPP53801 180 aa8.37□□□□□ -1.07
PHGDH-218ENST00000641491 C12orf57Q99622 126 aa8.37□□□□□ -1.07
PHGDH-218ENST00000641491 TTTY13Q9BZ97 58 aa8.37□□□□□ -1.07
PHGDH-218ENST00000641491 A0A1B0GVY2 172 aa8.36□□□□□ -1.07
PHGDH-218ENST00000641491 TSTD3H0UI37 97 aa8.36□□□□□ -1.07
PHGDH-218ENST00000641491 TIMM17BO60830 172 aa8.36□□□□□ -1.07
PHGDH-218ENST00000641491 MIR7-3HGQ8N6C7 128 aa8.36□□□□□ -1.07
PHGDH-218ENST00000641491 UQCR10Q9UDW1 63 aa8.36□□□□□ -1.07
PHGDH-218ENST00000641491 DLEU1O43261 78 aa8.35□□□□□ -1.07
PHGDH-218ENST00000641491 RPL24P83731 157 aaKnown RBP8.35□□□□□ -1.07
PHGDH-218ENST00000641491 Q6ZRP5 223 aa8.35□□□□□ -1.07
PHGDH-218ENST00000641491 A0A096LNI7 61 aa8.34□□□□□ -1.07
PHGDH-218ENST00000641491 Q6ZVH6 145 aa8.34□□□□□ -1.07
PHGDH-218ENST00000641491 BOD1L2Q8IYS8 172 aa8.34□□□□□ -1.07
PHGDH-218ENST00000641491 NKAPP1Q8N9T2 125 aa8.34□□□□□ -1.07
PHGDH-218ENST00000641491 HIST1H4GQ99525 98 aa8.34□□□□□ -1.07
PHGDH-218ENST00000641491 KRTAP4-5Q9BYR2 181 aa8.34□□□□□ -1.07
PHGDH-218ENST00000641491 XAGE1AQ9HD64 81 aa8.34□□□□□ -1.07
PHGDH-218ENST00000641491 PKHD1P08F94 4074 aa8.34□□□□□ -1.08
PHGDH-218ENST00000641491 NPC2P61916 151 aa8.33□□□□□ -1.08
PHGDH-218ENST00000641491 SDIM1Q6ZPB5 146 aa8.33□□□□□ -1.08
PHGDH-218ENST00000641491 DAND5Q8N907 189 aa8.33□□□□□ -1.08
PHGDH-218ENST00000641491 HNRNPA3P51991 378 aaKnown RBP8.32□□□□□ -1.08
PHGDH-218ENST00000641491 SND1-IT1Q9HBX3 110 aa8.32□□□□□ -1.08
PHGDH-218ENST00000641491 DNAH17Q9UFH2 4485 aa8.31□□□□□ -1.08
PHGDH-218ENST00000641491 CHTF8P0CG12 524 aa8.31□□□□□ -1.08
PHGDH-218ENST00000641491 IFITM1P13164 125 aa8.31□□□□□ -1.08
PHGDH-218ENST00000641491 FAM19A5Q7Z5A7 132 aaPredicted RBP8.31□□□□□ -1.08
PHGDH-218ENST00000641491 SPANXDQ9BXN6 97 aa8.31□□□□□ -1.08
PHGDH-218ENST00000641491 SPANXCQ9NY87 97 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms