RNA–Protein interactions for RNA: ENST00000636443.1

SYNGAP1-215, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 79 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-215ENST00000636443 Q6ZN92 141 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 KRTAP5-2Q701N4 177 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 SMIM15Q7Z3B0 74 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 STX12Q86Y82 276 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 WFDC13Q8IUB5 93 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 Q8IZM0 81 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 C8orf59Q8N0T1 100 aaPredicted RBP0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 ST20-AS1Q8NBB2 130 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 PLAC4Q8WY50 150 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 PRRT1Q99946 306 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 Q9BRP9 147 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 RNASE7Q9H1E1 156 aaKnown RBP0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 ST20Q9HBF5 79 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 MTFP1Q9UDX5 166 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 EPDR1Q9UM22 224 aa0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 LSM5Q9Y4Y9 91 aaKnown RBP0.66□□□□□ -2.3
SYNGAP1-215ENST00000636443 KRTAP16-1A8MUX0 517 aa0.65□□□□□ -2.31
SYNGAP1-215ENST00000636443 PEX7O00628 323 aa0.65□□□□□ -2.31
SYNGAP1-215ENST00000636443 NCR3O14931 201 aa0.65□□□□□ -2.31
SYNGAP1-215ENST00000636443 PVALBP20472 110 aaPredicted RBP0.65□□□□□ -2.31
SYNGAP1-215ENST00000636443 S100A11P31949 105 aa0.65□□□□□ -2.31
SYNGAP1-215ENST00000636443 AKR1D1P51857 326 aa0.65□□□□□ -2.31
SYNGAP1-215ENST00000636443 AQP4P55087 323 aa0.65□□□□□ -2.31
SYNGAP1-215ENST00000636443 KRTAP10-12P60413 245 aa0.65□□□□□ -2.31
SYNGAP1-215ENST00000636443 ID3Q02535 119 aa0.65□□□□□ -2.31
SYNGAP1-215ENST00000636443 TWIST1Q15672 202 aa0.65□□□□□ -2.31
SYNGAP1-215ENST00000636443 C5orf47Q569G3 176 aa0.65□□□□□ -2.31
SYNGAP1-215ENST00000636443 ZC2HC1BQ5TFG8 222 aa0.65□□□□□ -2.31
SYNGAP1-215ENST00000636443 Q5XG85 94 aa0.65□□□□□ -2.31
SYNGAP1-215ENST00000636443 MZT2BQ6NZ67 158 aa0.65□□□□□ -2.31
SYNGAP1-215ENST00000636443 MZT2AQ6P582 158 aa0.65□□□□□ -2.31
SYNGAP1-215ENST00000636443 PQLC2Q6ZP29 291 aa0.65□□□□□ -2.31
SYNGAP1-215ENST00000636443 TMUB2Q71RG4 321 aa0.65□□□□□ -2.31
SYNGAP1-215ENST00000636443 PRR15Q8IV56 129 aa0.65□□□□□ -2.31
SYNGAP1-215ENST00000636443 TMEM229BQ8NBD8 167 aa0.65□□□□□ -2.31
SYNGAP1-215ENST00000636443 LITAFQ99732 161 aa0.65□□□□□ -2.31
SYNGAP1-215ENST00000636443 SCP2D1Q9UJQ7 156 aa0.65□□□□□ -2.31
SYNGAP1-215ENST00000636443 ZFP30Q9Y2G7 519 aa0.65□□□□□ -2.31
SYNGAP1-215ENST00000636443 CSDC2Q9Y534 153 aaKnown RBP0.65□□□□□ -2.31
SYNGAP1-215ENST00000636443 OBSCNQ5VST9 7968 aa0.65□□□□□ -2.31
SYNGAP1-215ENST00000636443 XKRY2A2RUG3 117 aa0.64□□□□□ -2.31
SYNGAP1-215ENST00000636443 C7orf66A4D0T2 115 aa0.64□□□□□ -2.31
SYNGAP1-215ENST00000636443 FAM25EA8MYX2 175 aa0.64□□□□□ -2.31
SYNGAP1-215ENST00000636443 B5MCH6 92 aa0.64□□□□□ -2.31
SYNGAP1-215ENST00000636443 ATP5HO75947 161 aa0.64□□□□□ -2.31
SYNGAP1-215ENST00000636443 ATP5LO75964 103 aa0.64□□□□□ -2.31
SYNGAP1-215ENST00000636443 AKAIN1P0CW23 69 aa0.64□□□□□ -2.31
SYNGAP1-215ENST00000636443 DSCR10P59022 87 aa0.64□□□□□ -2.31
SYNGAP1-215ENST00000636443 NHLH2Q02577 135 aa0.64□□□□□ -2.31
SYNGAP1-215ENST00000636443 KLKP1Q107X0 134 aa0.64□□□□□ -2.31
SYNGAP1-215ENST00000636443 ZNF345Q14585 488 aa0.64□□□□□ -2.31
SYNGAP1-215ENST00000636443 JOSD1Q15040 202 aaPredicted RBP0.64□□□□□ -2.31
SYNGAP1-215ENST00000636443 ATP6V1FQ16864 119 aa0.64□□□□□ -2.31
SYNGAP1-215ENST00000636443 H1FX-AS1Q4G0G2 97 aa0.64□□□□□ -2.31
SYNGAP1-215ENST00000636443 TEX261Q6UWH6 196 aa0.64□□□□□ -2.31
SYNGAP1-215ENST00000636443 LINC00299Q6ZSB3 139 aa0.64□□□□□ -2.31
SYNGAP1-215ENST00000636443 DEFB105AQ8NG35 78 aa0.64□□□□□ -2.31
SYNGAP1-215ENST00000636443 MCFD2Q8NI22 146 aa0.64□□□□□ -2.31
SYNGAP1-215ENST00000636443 STOML3Q8TAV4 291 aa0.64□□□□□ -2.31
SYNGAP1-215ENST00000636443 FMC1Q96HJ9 113 aa0.64□□□□□ -2.31
SYNGAP1-215ENST00000636443 FAM210AQ96ND0 272 aa0.64□□□□□ -2.31
SYNGAP1-215ENST00000636443 C2orf88Q9BSF0 95 aa0.64□□□□□ -2.31
SYNGAP1-215ENST00000636443 NKX6-2Q9C056 277 aaPredicted RBP0.64□□□□□ -2.31
SYNGAP1-215ENST00000636443 TMEM191AQ9H0A3 160 aa0.64□□□□□ -2.31
SYNGAP1-215ENST00000636443 SND1-IT1Q9HBX3 110 aa0.64□□□□□ -2.31
SYNGAP1-215ENST00000636443 RAB26Q9ULW5 256 aa0.64□□□□□ -2.31
SYNGAP1-215ENST00000636443 TPRKBQ9Y3C4 175 aa0.64□□□□□ -2.31
SYNGAP1-215ENST00000636443 A0A087WXM4 84 aa0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 A0A1B0GWB2 263 aa0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 VCYO14598 125 aa0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 ZNF73O43830 326 aaPredicted RBP0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 SFT2D2O95562 160 aa0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 GNAO1P09471 354 aa0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 GIPP09681 153 aaPredicted RBP0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 GCHFRP30047 84 aa0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 IFI27P40305 119 aaPredicted RBP0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 AKR1C3P42330 323 aa0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 RPL35P42766 123 aaKnown RBP0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 CDC34P49427 236 aaPredicted RBP0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 NDUFA6P56556 154 aa0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 SPINK7P58062 85 aa0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 RPL39P62891 51 aaKnown RBP0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 TAL2Q16559 108 aa0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 TMEM128Q5BJH2 165 aa0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 Q5W150 140 aa0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 ALKAL2Q6UX46 152 aa0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 TEX43Q6ZNM6 134 aa0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 Q6ZRX8 168 aa0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 FA2HQ7L5A8 372 aa0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 LINC01561Q8N1V8 128 aa0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 SCGB1C1Q8TD33 95 aa0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 COX7B2Q8TF08 81 aa0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 CNBD2Q96M20 576 aa0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 VCX3BQ9H321 246 aa0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 VCX3AQ9NNX9 186 aa0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 SPANXA1Q9NS26 97 aa0.63□□□□□ -2.31
SYNGAP1-215ENST00000636443 TRBV10-3A0A0K0K1G6 114 aa0.62□□□□□ -2.31
SYNGAP1-215ENST00000636443 D6R8Y8 96 aa0.62□□□□□ -2.31
SYNGAP1-215ENST00000636443 F2Z2F3 143 aa0.62□□□□□ -2.31
SYNGAP1-215ENST00000636443 INMT-MINDY4F8WBC2 141 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms