RNA–Protein interactions for RNA: ENST00000636410.1

CHD2-224, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-224ENST00000636410 TMEM223A0PJW6 202 aa3.41□□□□□ -1.86
CHD2-224ENST00000636410 DPM2O94777 84 aa3.41□□□□□ -1.86
CHD2-224ENST00000636410 IGKCP01834 107 aa3.41□□□□□ -1.86
CHD2-224ENST00000636410 TLX1NBP0CAT3 122 aa3.41□□□□□ -1.86
CHD2-224ENST00000636410 C3orf79P0CE67 100 aa3.41□□□□□ -1.86
CHD2-224ENST00000636410 KRTDAPP60985 99 aa3.41□□□□□ -1.86
CHD2-224ENST00000636410 CKS1BP61024 79 aa3.41□□□□□ -1.86
CHD2-224ENST00000636410 CIRBPQ14011 172 aaKnown RBP3.41□□□□□ -1.86
CHD2-224ENST00000636410 C10orf25Q5T742 122 aa3.41□□□□□ -1.86
CHD2-224ENST00000636410 PET117Q6UWS5 81 aa3.41□□□□□ -1.86
CHD2-224ENST00000636410 C2orf82Q6UX34 121 aa3.41□□□□□ -1.86
CHD2-224ENST00000636410 UNQ6190/PRO20217Q6UXQ8 127 aa3.41□□□□□ -1.86
CHD2-224ENST00000636410 HIST3H2BBQ8N257 126 aa3.41□□□□□ -1.86
CHD2-224ENST00000636410 PMCHL2Q9BQD1 86 aa3.41□□□□□ -1.86
CHD2-224ENST00000636410 FAM30AQ9NZY2 134 aa3.41□□□□□ -1.86
CHD2-224ENST00000636410 C6orf48Q9UBA6 75 aa3.41□□□□□ -1.86
CHD2-224ENST00000636410 DNAH8Q96JB1 4490 aa3.4□□□□□ -1.86
CHD2-224ENST00000636410 A0A096LNI7 61 aa3.4□□□□□ -1.87
CHD2-224ENST00000636410 IGKV2-24A0A0C4DH68 120 aa3.4□□□□□ -1.87
CHD2-224ENST00000636410 C20orf202A1L168 122 aa3.4□□□□□ -1.87
CHD2-224ENST00000636410 PANO1I0J062 215 aa3.4□□□□□ -1.87
CHD2-224ENST00000636410 S100A2P29034 98 aa3.4□□□□□ -1.87
CHD2-224ENST00000636410 XGP55808 180 aa3.4□□□□□ -1.87
CHD2-224ENST00000636410 HAMPP81172 84 aa3.4□□□□□ -1.87
CHD2-224ENST00000636410 RPL18AQ02543 176 aaKnown RBP3.4□□□□□ -1.87
CHD2-224ENST00000636410 LINC01545Q5VT33 79 aa3.4□□□□□ -1.87
CHD2-224ENST00000636410 SFTA2Q6UW10 78 aa3.4□□□□□ -1.87
CHD2-224ENST00000636410 SCXQ7RTU7 201 aa3.4□□□□□ -1.87
CHD2-224ENST00000636410 SPACA4Q8TDM5 124 aa3.4□□□□□ -1.87
CHD2-224ENST00000636410 HIST1H2BLQ99880 126 aa3.4□□□□□ -1.87
CHD2-224ENST00000636410 LINC00474Q9P2X8 69 aa3.4□□□□□ -1.87
CHD2-224ENST00000636410 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.4□□□□□ -1.87
CHD2-224ENST00000636410 APOBP04114 4563 aaKnown RBP3.4□□□□□ -1.87
CHD2-224ENST00000636410 C5orf52A6NGY3 159 aa3.39□□□□□ -1.87
CHD2-224ENST00000636410 NDUFC2-KCTD14E9PQ53 114 aa3.39□□□□□ -1.87
CHD2-224ENST00000636410 CHTF8P0CG12 524 aa3.39□□□□□ -1.87
CHD2-224ENST00000636410 AKR1D1P51857 326 aa3.39□□□□□ -1.87
CHD2-224ENST00000636410 PTTG1IPP53801 180 aa3.39□□□□□ -1.87
CHD2-224ENST00000636410 HERVK_113P61574 105 aa3.39□□□□□ -1.87
CHD2-224ENST00000636410 SNRPEP62304 92 aaKnown RBP3.39□□□□□ -1.87
CHD2-224ENST00000636410 GAGE2BQ13066 116 aa3.39□□□□□ -1.87
CHD2-224ENST00000636410 Q6ZRP5 223 aa3.39□□□□□ -1.87
CHD2-224ENST00000636410 CIRBP-AS1Q8TBR5 109 aa3.39□□□□□ -1.87
CHD2-224ENST00000636410 LEPROTO15243 131 aa3.38□□□□□ -1.87
CHD2-224ENST00000636410 MAJINQ3KP22 176 aa3.38□□□□□ -1.87
CHD2-224ENST00000636410 C9orf116Q5BN46 136 aaPredicted RBP3.38□□□□□ -1.87
CHD2-224ENST00000636410 STPG4Q8N801 248 aa3.38□□□□□ -1.87
CHD2-224ENST00000636410 PLEKHB2Q96CS7 222 aa3.38□□□□□ -1.87
CHD2-224ENST00000636410 ZNF625Q96I27 306 aaPredicted RBP3.38□□□□□ -1.87
CHD2-224ENST00000636410 PLAC8Q9NZF1 115 aa3.38□□□□□ -1.87
CHD2-224ENST00000636410 HERC2O95714 4834 aa3.38□□□□□ -1.87
CHD2-224ENST00000636410 A0A087WYN8 130 aa3.37□□□□□ -1.87
CHD2-224ENST00000636410 E9PLD3 99 aa3.37□□□□□ -1.87
CHD2-224ENST00000636410 J3QQQ9 107 aa3.37□□□□□ -1.87
CHD2-224ENST00000636410 NMUP48645 174 aa3.37□□□□□ -1.87
CHD2-224ENST00000636410 TSPEAR-AS2P59090 65 aa3.37□□□□□ -1.87
CHD2-224ENST00000636410 HERV-K104P63124 156 aa3.37□□□□□ -1.87
CHD2-224ENST00000636410 COX17Q14061 63 aa3.37□□□□□ -1.87
CHD2-224ENST00000636410 GAGE2EQ4V326 116 aa3.37□□□□□ -1.87
CHD2-224ENST00000636410 Q8N1X5 172 aa3.37□□□□□ -1.87
CHD2-224ENST00000636410 DPH3Q96FX2 82 aa3.37□□□□□ -1.87
CHD2-224ENST00000636410 GAGE2DQ9UEU5 116 aa3.37□□□□□ -1.87
CHD2-224ENST00000636410 ERG28Q9UKR5 140 aa3.37□□□□□ -1.87
CHD2-224ENST00000636410 MYMXA0A1B0GTQ4 84 aa3.36□□□□□ -1.87
CHD2-224ENST00000636410 EPM2AB3EWF7 344 aa3.36□□□□□ -1.87
CHD2-224ENST00000636410 SMR3BP02814 79 aaPredicted RBP3.36□□□□□ -1.87
CHD2-224ENST00000636410 LGALS3P17931 250 aaKnown RBP3.36□□□□□ -1.87
CHD2-224ENST00000636410 PFN2P35080 140 aa3.36□□□□□ -1.87
CHD2-224ENST00000636410 MEIG1Q5JSS6 88 aa3.36□□□□□ -1.87
CHD2-224ENST00000636410 C9orf129Q5T035 196 aaKnown RBP3.36□□□□□ -1.87
CHD2-224ENST00000636410 ATOH7Q8N100 152 aa3.36□□□□□ -1.87
CHD2-224ENST00000636410 LINC00528Q8N1L1 170 aa3.36□□□□□ -1.87
CHD2-224ENST00000636410 NDUFA12Q9UI09 145 aa3.36□□□□□ -1.87
CHD2-224ENST00000636410 TMA7Q9Y2S6 64 aaKnown RBP3.36□□□□□ -1.87
CHD2-224ENST00000636410 A0A1W2PNN7 141 aa3.35□□□□□ -1.87
CHD2-224ENST00000636410 LINC00587B1AMM8 73 aa3.35□□□□□ -1.87
CHD2-224ENST00000636410 FAM229AH3BQW9 127 aa3.35□□□□□ -1.87
CHD2-224ENST00000636410 Q5VSD8 79 aa3.35□□□□□ -1.87
CHD2-224ENST00000636410 XAGE1AQ9HD64 81 aa3.35□□□□□ -1.87
CHD2-224ENST00000636410 HSPG2P98160 4391 aa3.35□□□□□ -1.87
CHD2-224ENST00000636410 IGKV2D-26A0A0A0MRZ7 120 aa3.34□□□□□ -1.87
CHD2-224ENST00000636410 FAM168BA1KXE4 195 aa3.34□□□□□ -1.87
CHD2-224ENST00000636410 M0QXV9 152 aa3.34□□□□□ -1.87
CHD2-224ENST00000636410 SCGB1D1O95968 90 aa3.34□□□□□ -1.87
CHD2-224ENST00000636410 PLA2G1BP04054 148 aaKnown RBP3.34□□□□□ -1.87
CHD2-224ENST00000636410 ANKRD39Q53RE8 183 aa3.34□□□□□ -1.87
CHD2-224ENST00000636410 FAM19A5Q7Z5A7 132 aaPredicted RBP3.34□□□□□ -1.87
CHD2-224ENST00000636410 C7orf33Q8WU49 177 aa3.34□□□□□ -1.87
CHD2-224ENST00000636410 KRTAP17-1Q9BYP8 105 aa3.34□□□□□ -1.87
CHD2-224ENST00000636410 A0A0J9YXY3 114 aa3.33□□□□□ -1.88
CHD2-224ENST00000636410 A0A0U1RRA0 63 aa3.33□□□□□ -1.88
CHD2-224ENST00000636410 ZNF815PA8K554 130 aa3.33□□□□□ -1.88
CHD2-224ENST00000636410 HSBP1L1C9JCN9 74 aa3.33□□□□□ -1.88
CHD2-224ENST00000636410 SMIM13P0DJ93 91 aa3.33□□□□□ -1.88
CHD2-224ENST00000636410 LINC00158P58513 81 aa3.33□□□□□ -1.88
CHD2-224ENST00000636410 RPL37AP61513 92 aaKnown RBP3.33□□□□□ -1.88
CHD2-224ENST00000636410 SERTAD4-AS1Q5TG53 156 aa3.33□□□□□ -1.88
CHD2-224ENST00000636410 PHF5AQ7RTV0 110 aaKnown RBP3.33□□□□□ -1.88
CHD2-224ENST00000636410 KRTAP7-1Q8IUC3 87 aa3.33□□□□□ -1.88
CHD2-224ENST00000636410 MIR7-3HGQ8N6C7 128 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms