RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 Q8IZM0 81 aa9.9□□□□□ -0.83
CLN6-211ENST00000635754 TRAV12-1A0A0B4J245 112 aa9.89□□□□□ -0.83
CLN6-211ENST00000635754 IGKV2-24A0A0C4DH68 120 aa9.89□□□□□ -0.83
CLN6-211ENST00000635754 PANO1I0J062 215 aa9.89□□□□□ -0.83
CLN6-211ENST00000635754 SMR3BP02814 79 aaPredicted RBP9.89□□□□□ -0.83
CLN6-211ENST00000635754 C6orf226Q5I0X4 101 aa9.89□□□□□ -0.83
CLN6-211ENST00000635754 SPACA4Q8TDM5 124 aa9.89□□□□□ -0.83
CLN6-211ENST00000635754 DPH3Q96FX2 82 aa9.89□□□□□ -0.83
CLN6-211ENST00000635754 CHTOPQ9Y3Y2 248 aaKnown RBP9.89□□□□□ -0.83
CLN6-211ENST00000635754 RYR1P21817 5038 aa9.88□□□□□ -0.83
CLN6-211ENST00000635754 A0A096LNI7 61 aa9.88□□□□□ -0.83
CLN6-211ENST00000635754 SPINK8P0C7L1 97 aa9.88□□□□□ -0.83
CLN6-211ENST00000635754 CKS1BP61024 79 aa9.88□□□□□ -0.83
CLN6-211ENST00000635754 C10orf25Q5T742 122 aa9.88□□□□□ -0.83
CLN6-211ENST00000635754 UNQ6190/PRO20217Q6UXQ8 127 aa9.88□□□□□ -0.83
CLN6-211ENST00000635754 LINC00474Q9P2X8 69 aa9.88□□□□□ -0.83
CLN6-211ENST00000635754 HSPB8Q9UJY1 196 aa9.88□□□□□ -0.83
CLN6-211ENST00000635754 HERC2O95714 4834 aa9.87□□□□□ -0.83
CLN6-211ENST00000635754 HSPG2P98160 4391 aa9.87□□□□□ -0.83
CLN6-211ENST00000635754 FABP4P15090 132 aa9.87□□□□□ -0.83
CLN6-211ENST00000635754 ZNF22P17026 224 aaPredicted RBP9.87□□□□□ -0.83
CLN6-211ENST00000635754 C2orf82Q6UX34 121 aa9.87□□□□□ -0.83
CLN6-211ENST00000635754 C6orf48Q9UBA6 75 aa9.87□□□□□ -0.83
CLN6-211ENST00000635754 TRBV30A0A0K0K1B3 111 aa9.86□□□□□ -0.83
CLN6-211ENST00000635754 C11orf86A6NJI1 115 aa9.86□□□□□ -0.83
CLN6-211ENST00000635754 RPL18AQ02543 176 aaKnown RBP9.86□□□□□ -0.83
CLN6-211ENST00000635754 MAJINQ3KP22 176 aa9.86□□□□□ -0.83
CLN6-211ENST00000635754 F8VRH5 84 aa9.85□□□□□ -0.83
CLN6-211ENST00000635754 H0Y8G0 127 aa9.85□□□□□ -0.83
CLN6-211ENST00000635754 CXCL5P42830 114 aa9.85□□□□□ -0.83
CLN6-211ENST00000635754 PTTG1IPP53801 180 aa9.85□□□□□ -0.83
CLN6-211ENST00000635754 GAGE2BQ13066 116 aa9.85□□□□□ -0.83
CLN6-211ENST00000635754 TMEM170BQ5T4T1 132 aa9.85□□□□□ -0.83
CLN6-211ENST00000635754 COX7B2Q8TF08 81 aa9.85□□□□□ -0.83
CLN6-211ENST00000635754 A0A087WYN8 130 aa9.84□□□□□ -0.83
CLN6-211ENST00000635754 EPM2AB3EWF7 344 aa9.84□□□□□ -0.83
CLN6-211ENST00000635754 FAM229AH3BQW9 127 aa9.84□□□□□ -0.83
CLN6-211ENST00000635754 Q5VSD8 79 aa9.84□□□□□ -0.83
CLN6-211ENST00000635754 TLX1NBP0CAT3 122 aa9.83□□□□□ -0.84
CLN6-211ENST00000635754 ODF1Q14990 250 aa9.82□□□□□ -0.84
CLN6-211ENST00000635754 STPG4Q8N801 248 aa9.82□□□□□ -0.84
CLN6-211ENST00000635754 IGLV5-39A0A0G2JS06 123 aa9.82□□□□□ -0.84
CLN6-211ENST00000635754 COA6Q5JTJ3 125 aaKnown RBP9.82□□□□□ -0.84
CLN6-211ENST00000635754 MAP1LC3CQ9BXW4 147 aa9.82□□□□□ -0.84
CLN6-211ENST00000635754 PLAC8Q9NZF1 115 aa9.82□□□□□ -0.84
CLN6-211ENST00000635754 DNAH8Q96JB1 4490 aa9.81□□□□□ -0.84
CLN6-211ENST00000635754 C9orf116Q5BN46 136 aaPredicted RBP9.81□□□□□ -0.84
CLN6-211ENST00000635754 KRTAP4-5Q9BYR2 181 aa9.81□□□□□ -0.84
CLN6-211ENST00000635754 NDUFC2-KCTD14E9PQ53 114 aa9.8□□□□□ -0.84
CLN6-211ENST00000635754 PLNP26678 52 aa9.8□□□□□ -0.84
CLN6-211ENST00000635754 PLA2G1BP04054 148 aaKnown RBP9.79□□□□□ -0.84
CLN6-211ENST00000635754 Q6ZRP5 223 aa9.79□□□□□ -0.84
CLN6-211ENST00000635754 TMEM223A0PJW6 202 aa9.78□□□□□ -0.84
CLN6-211ENST00000635754 GAGE2EQ4V326 116 aa9.78□□□□□ -0.84
CLN6-211ENST00000635754 GAGE2DQ9UEU5 116 aa9.78□□□□□ -0.84
CLN6-211ENST00000635754 DPM2O94777 84 aa9.77□□□□□ -0.85
CLN6-211ENST00000635754 SYS1-DBNDD2H3BUS1 97 aa9.75□□□□□ -0.85
CLN6-211ENST00000635754 SFTA2Q6UW10 78 aa9.75□□□□□ -0.85
CLN6-211ENST00000635754 C7orf33Q8WU49 177 aa9.75□□□□□ -0.85
CLN6-211ENST00000635754 PMCHL2Q9BQD1 86 aa9.75□□□□□ -0.85
CLN6-211ENST00000635754 IGKCP01834 107 aa9.74□□□□□ -0.85
CLN6-211ENST00000635754 RPL37AP61513 92 aaKnown RBP9.74□□□□□ -0.85
CLN6-211ENST00000635754 SRRM2Q9UQ35 2752 aaKnown RBP9.74□□□□□ -0.85
CLN6-211ENST00000635754 A0A1W2PNN7 141 aa9.73□□□□□ -0.85
CLN6-211ENST00000635754 HERVK_113P61574 105 aa9.72□□□□□ -0.85
CLN6-211ENST00000635754 PET117Q6UWS5 81 aa9.72□□□□□ -0.85
CLN6-211ENST00000635754 ZNF625Q96I27 306 aaPredicted RBP9.72□□□□□ -0.85
CLN6-211ENST00000635754 S100A6P06703 90 aa9.71□□□□□ -0.86
CLN6-211ENST00000635754 C3orf79P0CE67 100 aa9.71□□□□□ -0.86
CLN6-211ENST00000635754 C9orf129Q5T035 196 aaKnown RBP9.71□□□□□ -0.86
CLN6-211ENST00000635754 FAM19A5Q7Z5A7 132 aaPredicted RBP9.71□□□□□ -0.86
CLN6-211ENST00000635754 XAGE1AQ9HD64 81 aa9.71□□□□□ -0.86
CLN6-211ENST00000635754 ERG28Q9UKR5 140 aa9.71□□□□□ -0.86
CLN6-211ENST00000635754 FAT1Q14517 4588 aa9.7□□□□□ -0.86
CLN6-211ENST00000635754 FAM168BA1KXE4 195 aa9.7□□□□□ -0.86
CLN6-211ENST00000635754 KRTDAPP60985 99 aa9.7□□□□□ -0.86
CLN6-211ENST00000635754 LINC01545Q5VT33 79 aa9.7□□□□□ -0.86
CLN6-211ENST00000635754 LEPROTO15243 131 aa9.69□□□□□ -0.86
CLN6-211ENST00000635754 INAFM2P0DMQ5 153 aa9.69□□□□□ -0.86
CLN6-211ENST00000635754 PFN2P35080 140 aa9.69□□□□□ -0.86
CLN6-211ENST00000635754 COX17Q14061 63 aa9.69□□□□□ -0.86
CLN6-211ENST00000635754 PLEKHB2Q96CS7 222 aa9.69□□□□□ -0.86
CLN6-211ENST00000635754 KRTAP10-4P60372 401 aaPredicted RBP9.68□□□□□ -0.86
CLN6-211ENST00000635754 S100A2P29034 98 aa9.67□□□□□ -0.86
CLN6-211ENST00000635754 HIST3H2BBQ8N257 126 aa9.67□□□□□ -0.86
CLN6-211ENST00000635754 NDUFA12Q9UI09 145 aa9.67□□□□□ -0.86
CLN6-211ENST00000635754 C20orf202A1L168 122 aa9.66□□□□□ -0.86
CLN6-211ENST00000635754 M0QXV9 152 aa9.66□□□□□ -0.86
CLN6-211ENST00000635754 HERV-K104P63124 156 aa9.66□□□□□ -0.86
CLN6-211ENST00000635754 PHF5AQ7RTV0 110 aaKnown RBP9.66□□□□□ -0.86
CLN6-211ENST00000635754 MYMXA0A1B0GTQ4 84 aa9.65□□□□□ -0.86
CLN6-211ENST00000635754 J3QQQ9 107 aa9.65□□□□□ -0.86
CLN6-211ENST00000635754 TSPEAR-AS2P59090 65 aa9.65□□□□□ -0.86
CLN6-211ENST00000635754 LGALS3P17931 250 aaKnown RBP9.65□□□□□ -0.87
CLN6-211ENST00000635754 KRTAP7-1Q8IUC3 87 aa9.65□□□□□ -0.87
CLN6-211ENST00000635754 E9PLD3 99 aa9.64□□□□□ -0.87
CLN6-211ENST00000635754 NMUP48645 174 aa9.64□□□□□ -0.87
CLN6-211ENST00000635754 LINC00158P58513 81 aa9.64□□□□□ -0.87
CLN6-211ENST00000635754 PRR3P79522 188 aaKnown RBP9.64□□□□□ -0.87
CLN6-211ENST00000635754 MEIG1Q5JSS6 88 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms