RNA–Protein interactions for RNA: ENST00000628496.2

SOX2-OT-248, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 801 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-248ENST00000628496 SMIM1B2RUZ4 78 aa8.59□□□□□ -1.03
SOX2-OT-248ENST00000628496 PTTG1IPP53801 180 aa8.59□□□□□ -1.03
SOX2-OT-248ENST00000628496 NDUFA6P56556 154 aa8.59□□□□□ -1.03
SOX2-OT-248ENST00000628496 ANKRD39Q53RE8 183 aa8.59□□□□□ -1.03
SOX2-OT-248ENST00000628496 FAM19A2Q8N3H0 131 aa8.59□□□□□ -1.03
SOX2-OT-248ENST00000628496 PLAC8Q9NZF1 115 aa8.59□□□□□ -1.03
SOX2-OT-248ENST00000628496 C6orf48Q9UBA6 75 aa8.59□□□□□ -1.03
SOX2-OT-248ENST00000628496 VPS13BQ7Z7G8 4022 aa8.58□□□□□ -1.04
SOX2-OT-248ENST00000628496 HSBP1O75506 76 aa8.58□□□□□ -1.04
SOX2-OT-248ENST00000628496 SERF1AO75920 110 aa8.58□□□□□ -1.04
SOX2-OT-248ENST00000628496 IGLC3P0DOY3 106 aa8.58□□□□□ -1.04
SOX2-OT-248ENST00000628496 KRTAP10-4P60372 401 aaPredicted RBP8.58□□□□□ -1.04
SOX2-OT-248ENST00000628496 GAGE2BQ13066 116 aa8.58□□□□□ -1.04
SOX2-OT-248ENST00000628496 Q8IZM0 81 aa8.58□□□□□ -1.04
SOX2-OT-248ENST00000628496 PACRGQ96M98 296 aaPredicted RBP8.58□□□□□ -1.04
SOX2-OT-248ENST00000628496 TOMM7Q9P0U1 55 aa8.58□□□□□ -1.04
SOX2-OT-248ENST00000628496 NUPR1O60356 82 aa8.57□□□□□ -1.04
SOX2-OT-248ENST00000628496 RPL18AQ02543 176 aaKnown RBP8.57□□□□□ -1.04
SOX2-OT-248ENST00000628496 STPG4Q8N801 248 aa8.57□□□□□ -1.04
SOX2-OT-248ENST00000628496 LINC00474Q9P2X8 69 aa8.57□□□□□ -1.04
SOX2-OT-248ENST00000628496 PLA2G1BP04054 148 aaKnown RBP8.56□□□□□ -1.04
SOX2-OT-248ENST00000628496 PRSS2P07478 247 aa8.56□□□□□ -1.04
SOX2-OT-248ENST00000628496 SPINK8P0C7L1 97 aa8.56□□□□□ -1.04
SOX2-OT-248ENST00000628496 C6orf226Q5I0X4 101 aa8.56□□□□□ -1.04
SOX2-OT-248ENST00000628496 IFI27L1Q96BM0 104 aa8.56□□□□□ -1.04
SOX2-OT-248ENST00000628496 TRBV30A0A0K0K1B3 111 aa8.55□□□□□ -1.04
SOX2-OT-248ENST00000628496 TLX1NBP0CAT3 122 aa8.55□□□□□ -1.04
SOX2-OT-248ENST00000628496 INAFM2P0DMQ5 153 aa8.55□□□□□ -1.04
SOX2-OT-248ENST00000628496 ZNF22P17026 224 aaPredicted RBP8.55□□□□□ -1.04
SOX2-OT-248ENST00000628496 C11orf86A6NJI1 115 aa8.54□□□□□ -1.04
SOX2-OT-248ENST00000628496 CKS1BP61024 79 aa8.54□□□□□ -1.04
SOX2-OT-248ENST00000628496 C9orf116Q5BN46 136 aaPredicted RBP8.54□□□□□ -1.04
SOX2-OT-248ENST00000628496 Q6ZRP5 223 aa8.54□□□□□ -1.04
SOX2-OT-248ENST00000628496 TRAV12-1A0A0B4J245 112 aa8.53□□□□□ -1.04
SOX2-OT-248ENST00000628496 H3BRM9 83 aa8.53□□□□□ -1.04
SOX2-OT-248ENST00000628496 HIST1H2BKO60814 126 aa8.53□□□□□ -1.04
SOX2-OT-248ENST00000628496 HIST1H2BJP06899 126 aa8.53□□□□□ -1.04
SOX2-OT-248ENST00000628496 HIST1H2BOP23527 126 aa8.53□□□□□ -1.04
SOX2-OT-248ENST00000628496 HIST1H2BBP33778 126 aa8.53□□□□□ -1.04
SOX2-OT-248ENST00000628496 HIST1H2BDP58876 126 aa8.53□□□□□ -1.04
SOX2-OT-248ENST00000628496 RPL37AP61513 92 aaKnown RBP8.53□□□□□ -1.04
SOX2-OT-248ENST00000628496 HIST1H2BCP62807 126 aa8.53□□□□□ -1.04
SOX2-OT-248ENST00000628496 HIST2H2BEQ16778 126 aa8.53□□□□□ -1.04
SOX2-OT-248ENST00000628496 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.53□□□□□ -1.04
SOX2-OT-248ENST00000628496 COX7B2Q8TF08 81 aa8.53□□□□□ -1.04
SOX2-OT-248ENST00000628496 HIST1H2BHQ93079 126 aa8.53□□□□□ -1.04
SOX2-OT-248ENST00000628496 HIST1H2BNQ99877 126 aa8.53□□□□□ -1.04
SOX2-OT-248ENST00000628496 HIST1H2BMQ99879 126 aa8.53□□□□□ -1.04
SOX2-OT-248ENST00000628496 CHTOPQ9Y3Y2 248 aaKnown RBP8.53□□□□□ -1.04
SOX2-OT-248ENST00000628496 A0A1W2PNN7 141 aa8.52□□□□□ -1.05
SOX2-OT-248ENST00000628496 F8VRH5 84 aa8.52□□□□□ -1.05
SOX2-OT-248ENST00000628496 SRRM2Q9UQ35 2752 aaKnown RBP8.52□□□□□ -1.05
SOX2-OT-248ENST00000628496 IGLV5-39A0A0G2JS06 123 aa8.51□□□□□ -1.05
SOX2-OT-248ENST00000628496 LEPROTL1O95214 131 aa8.51□□□□□ -1.05
SOX2-OT-248ENST00000628496 CXCL5P42830 114 aa8.51□□□□□ -1.05
SOX2-OT-248ENST00000628496 GAGE2EQ4V326 116 aa8.51□□□□□ -1.05
SOX2-OT-248ENST00000628496 GAGE2DQ9UEU5 116 aa8.51□□□□□ -1.05
SOX2-OT-248ENST00000628496 NDUFC2-KCTD14E9PQ53 114 aa8.5□□□□□ -1.05
SOX2-OT-248ENST00000628496 ATP6V1G1O75348 118 aa8.5□□□□□ -1.05
SOX2-OT-248ENST00000628496 TMEM170BQ5T4T1 132 aa8.5□□□□□ -1.05
SOX2-OT-248ENST00000628496 C7orf33Q8WU49 177 aa8.5□□□□□ -1.05
SOX2-OT-248ENST00000628496 FAM168BA1KXE4 195 aa8.49□□□□□ -1.05
SOX2-OT-248ENST00000628496 ODF1Q14990 250 aa8.49□□□□□ -1.05
SOX2-OT-248ENST00000628496 H0Y8G0 127 aa8.48□□□□□ -1.05
SOX2-OT-248ENST00000628496 FABP4P15090 132 aa8.48□□□□□ -1.05
SOX2-OT-248ENST00000628496 S100A1P23297 94 aa8.48□□□□□ -1.05
SOX2-OT-248ENST00000628496 HNRNPA3P51991 378 aaKnown RBP8.48□□□□□ -1.05
SOX2-OT-248ENST00000628496 C9orf129Q5T035 196 aaKnown RBP8.48□□□□□ -1.05
SOX2-OT-248ENST00000628496 HSPB8Q9UJY1 196 aa8.48□□□□□ -1.05
SOX2-OT-248ENST00000628496 KRTAP7-1Q8IUC3 87 aa8.47□□□□□ -1.05
SOX2-OT-248ENST00000628496 TMEM223A0PJW6 202 aa8.46□□□□□ -1.06
SOX2-OT-248ENST00000628496 C21orf62-AS1Q17RA5 79 aa8.46□□□□□ -1.06
SOX2-OT-248ENST00000628496 PRR3P79522 188 aaKnown RBP8.45□□□□□ -1.06
SOX2-OT-248ENST00000628496 PHF5AQ7RTV0 110 aaKnown RBP8.45□□□□□ -1.06
SOX2-OT-248ENST00000628496 FAM19A5Q7Z5A7 132 aaPredicted RBP8.45□□□□□ -1.06
SOX2-OT-248ENST00000628496 XAGE1AQ9HD64 81 aa8.44□□□□□ -1.06
SOX2-OT-248ENST00000628496 COA6Q5JTJ3 125 aaKnown RBP8.43□□□□□ -1.06
SOX2-OT-248ENST00000628496 PMCHL2Q9BQD1 86 aa8.43□□□□□ -1.06
SOX2-OT-248ENST00000628496 MYCBP2O75592 4640 aa8.42□□□□□ -1.06
SOX2-OT-248ENST00000628496 SERTAD4-AS1Q5TG53 156 aa8.42□□□□□ -1.06
SOX2-OT-248ENST00000628496 ZNF625Q96I27 306 aaPredicted RBP8.42□□□□□ -1.06
SOX2-OT-248ENST00000628496 M0QXV9 152 aa8.41□□□□□ -1.06
SOX2-OT-248ENST00000628496 PLNP26678 52 aa8.41□□□□□ -1.06
SOX2-OT-248ENST00000628496 KRTAP11-1Q8IUC1 163 aa8.41□□□□□ -1.06
SOX2-OT-248ENST00000628496 MAP1LC3CQ9BXW4 147 aa8.41□□□□□ -1.06
SOX2-OT-248ENST00000628496 DPM2O94777 84 aa8.4□□□□□ -1.06
SOX2-OT-248ENST00000628496 PFN2P35080 140 aa8.4□□□□□ -1.06
SOX2-OT-248ENST00000628496 ERG28Q9UKR5 140 aa8.4□□□□□ -1.06
SOX2-OT-248ENST00000628496 SFTA2Q6UW10 78 aa8.39□□□□□ -1.07
SOX2-OT-248ENST00000628496 PSORS1C2Q9UIG4 136 aa8.39□□□□□ -1.07
SOX2-OT-248ENST00000628496 H3BS24 57 aa8.38□□□□□ -1.07
SOX2-OT-248ENST00000628496 SYS1-DBNDD2H3BUS1 97 aa8.38□□□□□ -1.07
SOX2-OT-248ENST00000628496 IGKCP01834 107 aa8.38□□□□□ -1.07
SOX2-OT-248ENST00000628496 TSPEAR-AS2P59090 65 aa8.38□□□□□ -1.07
SOX2-OT-248ENST00000628496 COX17Q14061 63 aa8.37□□□□□ -1.07
SOX2-OT-248ENST00000628496 C22orf24Q9Y442 160 aa8.37□□□□□ -1.07
SOX2-OT-248ENST00000628496 PKHD1L1Q86WI1 4243 aa8.37□□□□□ -1.07
SOX2-OT-248ENST00000628496 FLG2Q5D862 2391 aaPredicted RBP8.36□□□□□ -1.07
SOX2-OT-248ENST00000628496 KRTAP29-1A8MX34 341 aaPredicted RBP8.36□□□□□ -1.07
SOX2-OT-248ENST00000628496 SND1-IT1Q9HBX3 110 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms