RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 SPINK8P0C7L1 97 aa9.1□□□□□ -0.95
CBWD3-217ENST00000621474 Q8N1X5 172 aa9.1□□□□□ -0.95
CBWD3-217ENST00000621474 PACRGQ96M98 296 aaPredicted RBP9.1□□□□□ -0.95
CBWD3-217ENST00000621474 CHTOPQ9Y3Y2 248 aaKnown RBP9.1□□□□□ -0.95
CBWD3-217ENST00000621474 FABP4P15090 132 aa9.09□□□□□ -0.95
CBWD3-217ENST00000621474 RNF151Q2KHN1 245 aa9.09□□□□□ -0.95
CBWD3-217ENST00000621474 TOMM7Q9P0U1 55 aa9.09□□□□□ -0.95
CBWD3-217ENST00000621474 F8VRH5 84 aa9.09□□□□□ -0.95
CBWD3-217ENST00000621474 ODF1Q14990 250 aa9.09□□□□□ -0.95
CBWD3-217ENST00000621474 IGKV2-24A0A0C4DH68 120 aa9.08□□□□□ -0.96
CBWD3-217ENST00000621474 IGLV5-39A0A0G2JS06 123 aa9.08□□□□□ -0.96
CBWD3-217ENST00000621474 A0A087WYN8 130 aa9.07□□□□□ -0.96
CBWD3-217ENST00000621474 C6orf226Q5I0X4 101 aa9.07□□□□□ -0.96
CBWD3-217ENST00000621474 HSPB8Q9UJY1 196 aa9.07□□□□□ -0.96
CBWD3-217ENST00000621474 ABCA13Q86UQ4 5058 aa9.07□□□□□ -0.96
CBWD3-217ENST00000621474 TRBV30A0A0K0K1B3 111 aa9.06□□□□□ -0.96
CBWD3-217ENST00000621474 LOC107984640A0A0U1RRK4 108 aa9.06□□□□□ -0.96
CBWD3-217ENST00000621474 H0Y8G0 127 aa9.06□□□□□ -0.96
CBWD3-217ENST00000621474 H3BRM9 83 aa9.06□□□□□ -0.96
CBWD3-217ENST00000621474 PRSS2P07478 247 aa9.06□□□□□ -0.96
CBWD3-217ENST00000621474 PTTG1IPP53801 180 aa9.06□□□□□ -0.96
CBWD3-217ENST00000621474 C9orf116Q5BN46 136 aaPredicted RBP9.06□□□□□ -0.96
CBWD3-217ENST00000621474 COX7B2Q8TF08 81 aa9.06□□□□□ -0.96
CBWD3-217ENST00000621474 TLX1NBP0CAT3 122 aa9.05□□□□□ -0.96
CBWD3-217ENST00000621474 TMEM170BQ5T4T1 132 aa9.05□□□□□ -0.96
CBWD3-217ENST00000621474 Q6ZRP5 223 aa9.05□□□□□ -0.96
CBWD3-217ENST00000621474 MAJINQ3KP22 176 aa9.05□□□□□ -0.96
CBWD3-217ENST00000621474 PLAC8Q9NZF1 115 aa9.05□□□□□ -0.96
CBWD3-217ENST00000621474 PCLOQ9Y6V0 5065 aa9.04□□□□□ -0.96
CBWD3-217ENST00000621474 CKS1BP61024 79 aa9.04□□□□□ -0.96
CBWD3-217ENST00000621474 RPL18AQ02543 176 aaKnown RBP9.04□□□□□ -0.96
CBWD3-217ENST00000621474 GAGE2BQ13066 116 aa9.04□□□□□ -0.96
CBWD3-217ENST00000621474 TMEM223A0PJW6 202 aa9.03□□□□□ -0.96
CBWD3-217ENST00000621474 CXCL5P42830 114 aa9.03□□□□□ -0.96
CBWD3-217ENST00000621474 Q5VSD8 79 aa9.03□□□□□ -0.96
CBWD3-217ENST00000621474 PMCHL2Q9BQD1 86 aa9.03□□□□□ -0.96
CBWD3-217ENST00000621474 PKIGQ9Y2B9 76 aa9.03□□□□□ -0.96
CBWD3-217ENST00000621474 EPM2AB3EWF7 344 aa9.02□□□□□ -0.96
CBWD3-217ENST00000621474 LINC00528Q8N1L1 170 aa9.02□□□□□ -0.96
CBWD3-217ENST00000621474 STPG4Q8N801 248 aa9.02□□□□□ -0.96
CBWD3-217ENST00000621474 LINC00474Q9P2X8 69 aa9.02□□□□□ -0.96
CBWD3-217ENST00000621474 NDUFC2-KCTD14E9PQ53 114 aa9.02□□□□□ -0.97
CBWD3-217ENST00000621474 KRTAP10-4P60372 401 aaPredicted RBP9.02□□□□□ -0.97
CBWD3-217ENST00000621474 MAP1LC3CQ9BXW4 147 aa9.02□□□□□ -0.97
CBWD3-217ENST00000621474 SYS1-DBNDD2H3BUS1 97 aa9.01□□□□□ -0.97
CBWD3-217ENST00000621474 A0A1W2PNN7 141 aa9□□□□□ -0.97
CBWD3-217ENST00000621474 DPH3Q96FX2 82 aa9□□□□□ -0.97
CBWD3-217ENST00000621474 PLNP26678 52 aa8.99□□□□□ -0.97
CBWD3-217ENST00000621474 GAGE2EQ4V326 116 aa8.99□□□□□ -0.97
CBWD3-217ENST00000621474 GAGE2DQ9UEU5 116 aa8.99□□□□□ -0.97
CBWD3-217ENST00000621474 C9orf129Q5T035 196 aaKnown RBP8.98□□□□□ -0.97
CBWD3-217ENST00000621474 KRTAP7-1Q8IUC3 87 aa8.98□□□□□ -0.97
CBWD3-217ENST00000621474 ZNF625Q96I27 306 aaPredicted RBP8.98□□□□□ -0.97
CBWD3-217ENST00000621474 SRRM2Q9UQ35 2752 aaKnown RBP8.98□□□□□ -0.97
CBWD3-217ENST00000621474 FAM168BA1KXE4 195 aa8.98□□□□□ -0.97
CBWD3-217ENST00000621474 DPM2O94777 84 aa8.98□□□□□ -0.97
CBWD3-217ENST00000621474 IGKCP01834 107 aa8.98□□□□□ -0.97
CBWD3-217ENST00000621474 C3orf79P0CE67 100 aa8.98□□□□□ -0.97
CBWD3-217ENST00000621474 LINC01545Q5VT33 79 aa8.98□□□□□ -0.97
CBWD3-217ENST00000621474 FAM229AH3BQW9 127 aa8.97□□□□□ -0.97
CBWD3-217ENST00000621474 HIST3H2BBQ8N257 126 aa8.96□□□□□ -0.98
CBWD3-217ENST00000621474 TSPEAR-AS2P59090 65 aa8.95□□□□□ -0.98
CBWD3-217ENST00000621474 PET117Q6UWS5 81 aa8.95□□□□□ -0.98
CBWD3-217ENST00000621474 XAGE1AQ9HD64 81 aa8.94□□□□□ -0.98
CBWD3-217ENST00000621474 HIST1H2BLQ99880 126 aa8.94□□□□□ -0.98
CBWD3-217ENST00000621474 KRTDAPP60985 99 aa8.93□□□□□ -0.98
CBWD3-217ENST00000621474 MYCBP2O75592 4640 aa8.92□□□□□ -0.98
CBWD3-217ENST00000621474 PLA2G1BP04054 148 aaKnown RBP8.92□□□□□ -0.98
CBWD3-217ENST00000621474 ERG28Q9UKR5 140 aa8.92□□□□□ -0.98
CBWD3-217ENST00000621474 FLG2Q5D862 2391 aaPredicted RBP8.92□□□□□ -0.98
CBWD3-217ENST00000621474 LEPROTO15243 131 aa8.91□□□□□ -0.98
CBWD3-217ENST00000621474 PFN2P35080 140 aa8.91□□□□□ -0.98
CBWD3-217ENST00000621474 RPL37AP61513 92 aaKnown RBP8.91□□□□□ -0.98
CBWD3-217ENST00000621474 SERTAD4-AS1Q5TG53 156 aa8.91□□□□□ -0.98
CBWD3-217ENST00000621474 SFTA2Q6UW10 78 aa8.91□□□□□ -0.98
CBWD3-217ENST00000621474 PHF5AQ7RTV0 110 aaKnown RBP8.91□□□□□ -0.98
CBWD3-217ENST00000621474 FAM19A5Q7Z5A7 132 aaPredicted RBP8.91□□□□□ -0.98
CBWD3-217ENST00000621474 PKHD1L1Q86WI1 4243 aa8.91□□□□□ -0.98
CBWD3-217ENST00000621474 S100A6P06703 90 aa8.91□□□□□ -0.98
CBWD3-217ENST00000621474 SNRPEP62304 92 aaKnown RBP8.91□□□□□ -0.98
CBWD3-217ENST00000621474 C5orf52A6NGY3 159 aa8.9□□□□□ -0.99
CBWD3-217ENST00000621474 E9PLD3 99 aa8.9□□□□□ -0.99
CBWD3-217ENST00000621474 HNRNPA3P51991 378 aaKnown RBP8.9□□□□□ -0.99
CBWD3-217ENST00000621474 COX17Q14061 63 aa8.9□□□□□ -0.99
CBWD3-217ENST00000621474 KRTAP11-1Q8IUC1 163 aa8.9□□□□□ -0.99
CBWD3-217ENST00000621474 NDUFA12Q9UI09 145 aa8.9□□□□□ -0.99
CBWD3-217ENST00000621474 J3QQQ9 107 aa8.89□□□□□ -0.99
CBWD3-217ENST00000621474 C7orf33Q8WU49 177 aa8.89□□□□□ -0.99
CBWD3-217ENST00000621474 HERVK_113P61574 105 aa8.88□□□□□ -0.99
CBWD3-217ENST00000621474 PLEKHB2Q96CS7 222 aa8.88□□□□□ -0.99
CBWD3-217ENST00000621474 M0QXV9 152 aa8.87□□□□□ -0.99
CBWD3-217ENST00000621474 S100A2P29034 98 aa8.87□□□□□ -0.99
CBWD3-217ENST00000621474 PRR3P79522 188 aaKnown RBP8.87□□□□□ -0.99
CBWD3-217ENST00000621474 SND1-IT1Q9HBX3 110 aa8.87□□□□□ -0.99
CBWD3-217ENST00000621474 IGKV2D-26A0A0A0MRZ7 120 aa8.87□□□□□ -0.99
CBWD3-217ENST00000621474 INAFM2P0DMQ5 153 aa8.87□□□□□ -0.99
CBWD3-217ENST00000621474 HERV-K104P63124 156 aa8.87□□□□□ -0.99
CBWD3-217ENST00000621474 A0A0U1RRA0 63 aa8.86□□□□□ -0.99
CBWD3-217ENST00000621474 MYMXA0A1B0GTQ4 84 aa8.86□□□□□ -0.99
CBWD3-217ENST00000621474 SMIM13P0DJ93 91 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms