RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 CUL9Q8IWT3 2517 aa6.71□□□□□ -1.33
TNFRSF9-204ENST00000615230 SMCR5Q8TEV8 140 aa6.71□□□□□ -1.33
TNFRSF9-204ENST00000615230 Q8NBF4 154 aa6.71□□□□□ -1.34
TNFRSF9-204ENST00000615230 HCFC1P51610 2035 aa6.71□□□□□ -1.34
TNFRSF9-204ENST00000615230 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.71□□□□□ -1.34
TNFRSF9-204ENST00000615230 ABCA1O95477 2261 aa6.7□□□□□ -1.34
TNFRSF9-204ENST00000615230 IGLV5-39A0A0G2JS06 123 aa6.7□□□□□ -1.34
TNFRSF9-204ENST00000615230 SHANK1Q9Y566 2161 aa6.7□□□□□ -1.34
TNFRSF9-204ENST00000615230 NTM-AS1Q6ZSK4 140 aa6.7□□□□□ -1.34
TNFRSF9-204ENST00000615230 SERP1Q9Y6X1 66 aa6.7□□□□□ -1.34
TNFRSF9-204ENST00000615230 IMUPQ9GZP8 106 aa6.7□□□□□ -1.34
TNFRSF9-204ENST00000615230 XGP55808 180 aa6.7□□□□□ -1.34
TNFRSF9-204ENST00000615230 WFDC2Q14508 124 aa6.69□□□□□ -1.34
TNFRSF9-204ENST00000615230 V9GYY9 64 aa6.69□□□□□ -1.34
TNFRSF9-204ENST00000615230 GAS8-AS1O95177 125 aa6.69□□□□□ -1.34
TNFRSF9-204ENST00000615230 KRTAP1-1Q07627 177 aa6.69□□□□□ -1.34
TNFRSF9-204ENST00000615230 Q6ZVQ6 151 aa6.69□□□□□ -1.34
TNFRSF9-204ENST00000615230 IGLV5-45A0A087WSX0 123 aa6.68□□□□□ -1.34
TNFRSF9-204ENST00000615230 Q8N9L7 120 aa6.68□□□□□ -1.34
TNFRSF9-204ENST00000615230 ENHOQ6UWT2 76 aa6.68□□□□□ -1.34
TNFRSF9-204ENST00000615230 LINC00575Q6W349 94 aa6.68□□□□□ -1.34
TNFRSF9-204ENST00000615230 BCE1O60756 84 aa6.67□□□□□ -1.34
TNFRSF9-204ENST00000615230 FAM19A3Q7Z5A8 133 aa6.67□□□□□ -1.34
TNFRSF9-204ENST00000615230 CSNK1G2-AS1Q8NCQ2 148 aa6.67□□□□□ -1.34
TNFRSF9-204ENST00000615230 TYMSOSQ8TAI1 123 aa6.67□□□□□ -1.34
TNFRSF9-204ENST00000615230 IGHV3OR16-9A0A0B4J2B5 98 aa6.67□□□□□ -1.34
TNFRSF9-204ENST00000615230 KRTAP10-3P60369 221 aa6.67□□□□□ -1.34
TNFRSF9-204ENST00000615230 SPAG11AQ6PDA7 123 aa6.67□□□□□ -1.34
TNFRSF9-204ENST00000615230 IGHV6-1A0A0B4J1U7 121 aa6.66□□□□□ -1.34
TNFRSF9-204ENST00000615230 LINC00167Q96N53 147 aa6.65□□□□□ -1.34
TNFRSF9-204ENST00000615230 C6orf48Q9UBA6 75 aa6.65□□□□□ -1.34
TNFRSF9-204ENST00000615230 WFDC13Q8IUB5 93 aa6.65□□□□□ -1.34
TNFRSF9-204ENST00000615230 C5orf47Q569G3 176 aa6.64□□□□□ -1.35
TNFRSF9-204ENST00000615230 LINC00612Q8N6U2 182 aa6.64□□□□□ -1.35
TNFRSF9-204ENST00000615230 PRR14LQ5THK1 2151 aa6.64□□□□□ -1.35
TNFRSF9-204ENST00000615230 NAV3Q8IVL0 2385 aa6.63□□□□□ -1.35
TNFRSF9-204ENST00000615230 FAM240AA0A1B0GVK7 77 aa6.63□□□□□ -1.35
TNFRSF9-204ENST00000615230 PRLHP81277 87 aa6.63□□□□□ -1.35
TNFRSF9-204ENST00000615230 SCXQ7RTU7 201 aa6.63□□□□□ -1.35
TNFRSF9-204ENST00000615230 PIEZO1Q92508 2521 aa6.63□□□□□ -1.35
TNFRSF9-204ENST00000615230 APLNQ9ULZ1 77 aa6.63□□□□□ -1.35
TNFRSF9-204ENST00000615230 ACACBO00763 2458 aa6.63□□□□□ -1.35
TNFRSF9-204ENST00000615230 C2orf91Q6ZV80 131 aa6.62□□□□□ -1.35
TNFRSF9-204ENST00000615230 PLCE1Q9P212 2302 aa6.62□□□□□ -1.35
TNFRSF9-204ENST00000615230 SDIM1Q6ZPB5 146 aa6.62□□□□□ -1.35
TNFRSF9-204ENST00000615230 NBASA2RRP1 2371 aa6.61□□□□□ -1.35
TNFRSF9-204ENST00000615230 C3orf22Q8N5N4 141 aa6.61□□□□□ -1.35
TNFRSF9-204ENST00000615230 ELOF1P60002 83 aaKnown RBP6.61□□□□□ -1.35
TNFRSF9-204ENST00000615230 URB1-AS1Q96HZ7 61 aa6.61□□□□□ -1.35
TNFRSF9-204ENST00000615230 SPTAN1Q13813 2472 aaKnown RBP6.6□□□□□ -1.35
TNFRSF9-204ENST00000615230 UQCRQO14949 82 aa6.6□□□□□ -1.35
TNFRSF9-204ENST00000615230 TSPEAR-AS2P59090 65 aa6.6□□□□□ -1.35
TNFRSF9-204ENST00000615230 TP53AIP1Q9HCN2 124 aa6.6□□□□□ -1.35
TNFRSF9-204ENST00000615230 WIPF1O43516 503 aa6.6□□□□□ -1.35
TNFRSF9-204ENST00000615230 A0A087WTM6 91 aa6.59□□□□□ -1.35
TNFRSF9-204ENST00000615230 A0A087WYN8 130 aa6.59□□□□□ -1.35
TNFRSF9-204ENST00000615230 Q6ZRX8 168 aa6.59□□□□□ -1.35
TNFRSF9-204ENST00000615230 NAV2Q8IVL1 2488 aa6.59□□□□□ -1.35
TNFRSF9-204ENST00000615230 DOPEY2Q9Y3R5 2298 aa6.59□□□□□ -1.35
TNFRSF9-204ENST00000615230 PHF5AQ7RTV0 110 aaKnown RBP6.59□□□□□ -1.35
TNFRSF9-204ENST00000615230 MOBPQ13875 183 aa6.59□□□□□ -1.35
TNFRSF9-204ENST00000615230 A0A087WSZ3 146 aa6.59□□□□□ -1.35
TNFRSF9-204ENST00000615230 C20orf197Q8N268 126 aa6.59□□□□□ -1.35
TNFRSF9-204ENST00000615230 C8orf87E5RJ46 101 aa6.59□□□□□ -1.36
TNFRSF9-204ENST00000615230 ADAMTSL4-AS1Q5T5F5 129 aa6.58□□□□□ -1.36
TNFRSF9-204ENST00000615230 PLA2G2DQ9UNK4 145 aa6.58□□□□□ -1.36
TNFRSF9-204ENST00000615230 EPM2AB3EWF7 344 aa6.57□□□□□ -1.36
TNFRSF9-204ENST00000615230 TLX1NBP0CAT3 122 aa6.57□□□□□ -1.36
TNFRSF9-204ENST00000615230 PRR3P79522 188 aaKnown RBP6.57□□□□□ -1.36
TNFRSF9-204ENST00000615230 SPACA4Q8TDM5 124 aa6.56□□□□□ -1.36
TNFRSF9-204ENST00000615230 HCG22E2RYF7 251 aa6.56□□□□□ -1.36
TNFRSF9-204ENST00000615230 ZNF575Q86XF7 245 aa6.56□□□□□ -1.36
TNFRSF9-204ENST00000615230 SERP2Q8N6R1 65 aa6.56□□□□□ -1.36
TNFRSF9-204ENST00000615230 CXCL6P80162 114 aa6.55□□□□□ -1.36
TNFRSF9-204ENST00000615230 ATP11AUNQ6ZP68 121 aa6.55□□□□□ -1.36
TNFRSF9-204ENST00000615230 PRR34Q9NV39 138 aa6.55□□□□□ -1.36
TNFRSF9-204ENST00000615230 A0A096LNJ9 63 aa6.55□□□□□ -1.36
TNFRSF9-204ENST00000615230 LINC00476Q8WZB0 136 aa6.54□□□□□ -1.36
TNFRSF9-204ENST00000615230 NCOR2Q9Y618 2525 aa6.54□□□□□ -1.36
TNFRSF9-204ENST00000615230 KIAA0087Q14695 138 aa6.54□□□□□ -1.36
TNFRSF9-204ENST00000615230 SSBP3-AS1Q7Z2R9 100 aa6.54□□□□□ -1.36
TNFRSF9-204ENST00000615230 ARHGAP32A7KAX9 2087 aa6.53□□□□□ -1.36
TNFRSF9-204ENST00000615230 TRAV7A0A075B6U4 112 aa6.53□□□□□ -1.36
TNFRSF9-204ENST00000615230 FAM30AQ9NZY2 134 aa6.53□□□□□ -1.36
TNFRSF9-204ENST00000615230 CNBPP62633 177 aaKnown RBP6.53□□□□□ -1.36
TNFRSF9-204ENST00000615230 LINC00313P59037 77 aa6.52□□□□□ -1.37
TNFRSF9-204ENST00000615230 Q6Q795 121 aa6.52□□□□□ -1.37
TNFRSF9-204ENST00000615230 LINC00304Q8N9R0 145 aa6.52□□□□□ -1.37
TNFRSF9-204ENST00000615230 CASC10Q5T4H9 136 aa6.51□□□□□ -1.37
TNFRSF9-204ENST00000615230 C9orf163Q8N9P6 203 aa6.51□□□□□ -1.37
TNFRSF9-204ENST00000615230 IGLV1-50A0A075B6I6 118 aa6.5□□□□□ -1.37
TNFRSF9-204ENST00000615230 hDV103S1A0JD37 113 aa6.5□□□□□ -1.37
TNFRSF9-204ENST00000615230 ZNF861PO60384 105 aa6.5□□□□□ -1.37
TNFRSF9-204ENST00000615230 EP400Q96L91 3159 aa6.5□□□□□ -1.37
TNFRSF9-204ENST00000615230 LINC01547P58512 204 aaPredicted RBP6.5□□□□□ -1.37
TNFRSF9-204ENST00000615230 LINC00310P59036 64 aa6.5□□□□□ -1.37
TNFRSF9-204ENST00000615230 H3BPC8 53 aa6.5□□□□□ -1.37
TNFRSF9-204ENST00000615230 IGF2RP11717 2491 aa6.49□□□□□ -1.37
TNFRSF9-204ENST00000615230 H0Y9P7 68 aa6.49□□□□□ -1.37
TNFRSF9-204ENST00000615230 BDP1A6H8Y1 2624 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms