RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 Q8IZM0 81 aa5.25□□□□□ -1.57
PCDH9-205ENST00000614931 NTN5Q8WTR8 489 aaPredicted RBP5.25□□□□□ -1.57
PCDH9-205ENST00000614931 PLEKHB2Q96CS7 222 aa5.25□□□□□ -1.57
PCDH9-205ENST00000614931 ZNF625Q96I27 306 aaPredicted RBP5.25□□□□□ -1.57
PCDH9-205ENST00000614931 PRO1933Q9H354 126 aa5.25□□□□□ -1.57
PCDH9-205ENST00000614931 COX11Q9Y6N1 276 aa5.25□□□□□ -1.57
PCDH9-205ENST00000614931 PKD1P98161 4303 aa5.24□□□□□ -1.57
PCDH9-205ENST00000614931 A0A087WTM6 91 aa5.24□□□□□ -1.57
PCDH9-205ENST00000614931 CDK2AP2O75956 126 aa5.24□□□□□ -1.57
PCDH9-205ENST00000614931 APOMO95445 188 aa5.24□□□□□ -1.57
PCDH9-205ENST00000614931 LCE2DQ5TA82 110 aaPredicted RBP5.24□□□□□ -1.57
PCDH9-205ENST00000614931 C14orf144Q96I85 54 aa5.24□□□□□ -1.57
PCDH9-205ENST00000614931 NDUFA12Q9UI09 145 aa5.24□□□□□ -1.57
PCDH9-205ENST00000614931 NDUFA1O15239 70 aa5.23□□□□□ -1.57
PCDH9-205ENST00000614931 COX8AP10176 69 aa5.23□□□□□ -1.57
PCDH9-205ENST00000614931 LGALS3P17931 250 aaKnown RBP5.23□□□□□ -1.57
PCDH9-205ENST00000614931 KRTAP10-2P60368 255 aa5.23□□□□□ -1.57
PCDH9-205ENST00000614931 CFAP161Q6P656 301 aa5.23□□□□□ -1.57
PCDH9-205ENST00000614931 UNQ6190/PRO20217Q6UXQ8 127 aa5.23□□□□□ -1.57
PCDH9-205ENST00000614931 Q6ZRU5 148 aa5.23□□□□□ -1.57
PCDH9-205ENST00000614931 ZNF815PA8K554 130 aa5.22□□□□□ -1.57
PCDH9-205ENST00000614931 PRSS2P07478 247 aa5.22□□□□□ -1.57
PCDH9-205ENST00000614931 FUSP35637 526 aaKnown RBP eCLIP5.22□□□□□ -1.57
PCDH9-205ENST00000614931 S100A12P80511 92 aa5.22□□□□□ -1.57
PCDH9-205ENST00000614931 C9orf116Q5BN46 136 aaPredicted RBP5.22□□□□□ -1.57
PCDH9-205ENST00000614931 C6orf226Q5I0X4 101 aa5.22□□□□□ -1.57
PCDH9-205ENST00000614931 C2orf91Q6ZV80 131 aa5.22□□□□□ -1.57
PCDH9-205ENST00000614931 BOD1L2Q8IYS8 172 aa5.22□□□□□ -1.57
PCDH9-205ENST00000614931 C2orf48Q96LS8 159 aa5.22□□□□□ -1.57
PCDH9-205ENST00000614931 C6orf48Q9UBA6 75 aa5.22□□□□□ -1.57
PCDH9-205ENST00000614931 DNAH11Q96DT5 4516 aa5.22□□□□□ -1.57
PCDH9-205ENST00000614931 PKHD1P08F94 4074 aa5.22□□□□□ -1.57
PCDH9-205ENST00000614931 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.21□□□□□ -1.58
PCDH9-205ENST00000614931 A0A0J9YXY3 114 aa5.21□□□□□ -1.58
PCDH9-205ENST00000614931 MYMXA0A1B0GTQ4 84 aa5.21□□□□□ -1.58
PCDH9-205ENST00000614931 ZNF561-AS1K7EIQ3 104 aa5.21□□□□□ -1.58
PCDH9-205ENST00000614931 CAMK2N2Q96S95 79 aa5.21□□□□□ -1.58
PCDH9-205ENST00000614931 DLEU1O43261 78 aa5.2□□□□□ -1.58
PCDH9-205ENST00000614931 CXCL5P42830 114 aa5.2□□□□□ -1.58
PCDH9-205ENST00000614931 SYCNQ0VAF6 134 aa5.2□□□□□ -1.58
PCDH9-205ENST00000614931 SLC25A34Q6PIV7 304 aa5.2□□□□□ -1.58
PCDH9-205ENST00000614931 Q8N814 137 aa5.2□□□□□ -1.58
PCDH9-205ENST00000614931 LITAFQ99732 161 aa5.2□□□□□ -1.58
PCDH9-205ENST00000614931 KRTAP4-5Q9BYR2 181 aa5.2□□□□□ -1.58
PCDH9-205ENST00000614931 PGPEP1Q9NXJ5 209 aa5.2□□□□□ -1.58
PCDH9-205ENST00000614931 PCLOQ9Y6V0 5065 aa5.2□□□□□ -1.58
PCDH9-205ENST00000614931 SMIM13P0DJ93 91 aa5.19□□□□□ -1.58
PCDH9-205ENST00000614931 CKS1BP61024 79 aa5.19□□□□□ -1.58
PCDH9-205ENST00000614931 CNBPP62633 177 aaKnown RBP5.19□□□□□ -1.58
PCDH9-205ENST00000614931 C14orf177Q52M58 125 aa5.19□□□□□ -1.58
PCDH9-205ENST00000614931 CARD19Q96LW7 228 aa5.19□□□□□ -1.58
PCDH9-205ENST00000614931 A0A0U1RRA0 63 aa5.18□□□□□ -1.58
PCDH9-205ENST00000614931 F8WDY8 70 aa5.18□□□□□ -1.58
PCDH9-205ENST00000614931 EREGO14944 169 aa5.18□□□□□ -1.58
PCDH9-205ENST00000614931 EIF4EBP3O60516 100 aaPredicted RBP5.18□□□□□ -1.58
PCDH9-205ENST00000614931 HERV-K104P63124 156 aa5.18□□□□□ -1.58
PCDH9-205ENST00000614931 LINC01620Q4KN68 170 aa5.18□□□□□ -1.58
PCDH9-205ENST00000614931 ADAMTSL4-AS1Q5T5F5 129 aa5.18□□□□□ -1.58
PCDH9-205ENST00000614931 DAND5Q8N907 189 aa5.18□□□□□ -1.58
PCDH9-205ENST00000614931 UQCR10Q9UDW1 63 aa5.18□□□□□ -1.58
PCDH9-205ENST00000614931 ERG28Q9UKR5 140 aa5.18□□□□□ -1.58
PCDH9-205ENST00000614931 DYNC1H1Q14204 4646 aaKnown RBP5.18□□□□□ -1.58
PCDH9-205ENST00000614931 TRBV30A0A0K0K1B3 111 aa5.17□□□□□ -1.58
PCDH9-205ENST00000614931 PFN2P35080 140 aa5.17□□□□□ -1.58
PCDH9-205ENST00000614931 RNF151Q2KHN1 245 aa5.17□□□□□ -1.58
PCDH9-205ENST00000614931 MEIG1Q5JSS6 88 aa5.17□□□□□ -1.58
PCDH9-205ENST00000614931 MIEN1Q9BRT3 115 aa5.17□□□□□ -1.58
PCDH9-205ENST00000614931 TIMM17BO60830 172 aa5.16□□□□□ -1.58
PCDH9-205ENST00000614931 SFTA2Q6UW10 78 aa5.16□□□□□ -1.58
PCDH9-205ENST00000614931 SOSTDC1Q6X4U4 206 aa5.16□□□□□ -1.58
PCDH9-205ENST00000614931 SCGB1D4Q6XE38 83 aa5.16□□□□□ -1.58
PCDH9-205ENST00000614931 Q8N1X5 172 aa5.16□□□□□ -1.58
PCDH9-205ENST00000614931 MIR7-3HGQ8N6C7 128 aa5.16□□□□□ -1.58
PCDH9-205ENST00000614931 C9orf163Q8N9P6 203 aa5.16□□□□□ -1.58
PCDH9-205ENST00000614931 HIGD1BQ9P298 99 aa5.16□□□□□ -1.58
PCDH9-205ENST00000614931 DNAH5Q8TE73 4624 aa5.16□□□□□ -1.58
PCDH9-205ENST00000614931 TSTD3H0UI37 97 aa5.15□□□□□ -1.59
PCDH9-205ENST00000614931 HNRNPA3P51991 378 aaKnown RBP5.15□□□□□ -1.59
PCDH9-205ENST00000614931 LINC00158P58513 81 aa5.15□□□□□ -1.59
PCDH9-205ENST00000614931 NPC2P61916 151 aa5.15□□□□□ -1.59
PCDH9-205ENST00000614931 Q6ZRP5 223 aa5.15□□□□□ -1.59
PCDH9-205ENST00000614931 Q8NDZ9 215 aa5.15□□□□□ -1.59
PCDH9-205ENST00000614931 SPANXDQ9BXN6 97 aa5.15□□□□□ -1.59
PCDH9-205ENST00000614931 SPANXB1Q9NS25 103 aaPredicted RBP5.15□□□□□ -1.59
PCDH9-205ENST00000614931 SPANXCQ9NY87 97 aa5.15□□□□□ -1.59
PCDH9-205ENST00000614931 RYR1P21817 5038 aa5.14□□□□□ -1.59
PCDH9-205ENST00000614931 A0A096LNI7 61 aa5.14□□□□□ -1.59
PCDH9-205ENST00000614931 TMEM238C9JI98 176 aa5.14□□□□□ -1.59
PCDH9-205ENST00000614931 NDUFC2-KCTD14E9PQ53 114 aa5.14□□□□□ -1.59
PCDH9-205ENST00000614931 PANO1I0J062 215 aa5.14□□□□□ -1.59
PCDH9-205ENST00000614931 TLX1NBP0CAT3 122 aa5.14□□□□□ -1.59
PCDH9-205ENST00000614931 XGP55808 180 aa5.14□□□□□ -1.59
PCDH9-205ENST00000614931 KRTAP10-1P60331 282 aa5.14□□□□□ -1.59
PCDH9-205ENST00000614931 RPL18AQ02543 176 aaKnown RBP5.14□□□□□ -1.59
PCDH9-205ENST00000614931 SND1-IT1Q9HBX3 110 aa5.14□□□□□ -1.59
PCDH9-205ENST00000614931 IGLV5-52A0A0A0MRZ9 124 aa5.13□□□□□ -1.59
PCDH9-205ENST00000614931 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.13□□□□□ -1.59
PCDH9-205ENST00000614931 LOC107984640A0A0U1RRK4 108 aa5.13□□□□□ -1.59
PCDH9-205ENST00000614931 CHTF8P0CG12 524 aa5.13□□□□□ -1.59
PCDH9-205ENST00000614931 DDTP30046 118 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms