RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 IGLV5-52A0A0A0MRZ9 124 aa9.56□□□□□ -0.88
CD48-203ENST00000613788 CDPF1Q6NVV7 123 aa9.56□□□□□ -0.88
CD48-203ENST00000613788 SFTA2Q6UW10 78 aa9.56□□□□□ -0.88
CD48-203ENST00000613788 CARD19Q96LW7 228 aa9.56□□□□□ -0.88
CD48-203ENST00000613788 A0A1B0GVY2 172 aa9.56□□□□□ -0.88
CD48-203ENST00000613788 J3QQQ9 107 aa9.56□□□□□ -0.88
CD48-203ENST00000613788 C2orf82Q6UX34 121 aa9.56□□□□□ -0.88
CD48-203ENST00000613788 UNQ6190/PRO20217Q6UXQ8 127 aa9.56□□□□□ -0.88
CD48-203ENST00000613788 Q6ZRU5 148 aa9.56□□□□□ -0.88
CD48-203ENST00000613788 LGALS3P17931 250 aaKnown RBP9.55□□□□□ -0.88
CD48-203ENST00000613788 KRTAP10-2P60368 255 aa9.55□□□□□ -0.88
CD48-203ENST00000613788 C9orf163Q8N9P6 203 aa9.55□□□□□ -0.88
CD48-203ENST00000613788 TRBV30A0A0K0K1B3 111 aa9.54□□□□□ -0.88
CD48-203ENST00000613788 RNF151Q2KHN1 245 aa9.54□□□□□ -0.88
CD48-203ENST00000613788 PYY3Q5JQD4 70 aa9.54□□□□□ -0.88
CD48-203ENST00000613788 NMUP48645 174 aa9.53□□□□□ -0.88
CD48-203ENST00000613788 ANKRD39Q53RE8 183 aa9.53□□□□□ -0.88
CD48-203ENST00000613788 C10orf25Q5T742 122 aa9.53□□□□□ -0.88
CD48-203ENST00000613788 NDUFA12Q9UI09 145 aa9.53□□□□□ -0.88
CD48-203ENST00000613788 DNAH11Q96DT5 4516 aa9.53□□□□□ -0.88
CD48-203ENST00000613788 MYMXA0A1B0GTQ4 84 aa9.52□□□□□ -0.88
CD48-203ENST00000613788 FUSP35637 526 aaKnown RBP eCLIP9.52□□□□□ -0.88
CD48-203ENST00000613788 TSPEAR-AS2P59090 65 aa9.52□□□□□ -0.88
CD48-203ENST00000613788 MAJINQ3KP22 176 aa9.52□□□□□ -0.88
CD48-203ENST00000613788 ZNF625Q96I27 306 aaPredicted RBP9.52□□□□□ -0.88
CD48-203ENST00000613788 PKIGQ9Y2B9 76 aa9.52□□□□□ -0.88
CD48-203ENST00000613788 HERV-K104P63124 156 aa9.51□□□□□ -0.89
CD48-203ENST00000613788 C6orf48Q9UBA6 75 aa9.51□□□□□ -0.89
CD48-203ENST00000613788 PKD1P98161 4303 aa9.51□□□□□ -0.89
CD48-203ENST00000613788 IGKV2D-26A0A0A0MRZ7 120 aa9.51□□□□□ -0.89
CD48-203ENST00000613788 GCSHP23434 173 aa9.51□□□□□ -0.89
CD48-203ENST00000613788 VAMP8Q9BV40 100 aa9.51□□□□□ -0.89
CD48-203ENST00000613788 LINC00587B1AMM8 73 aa9.49□□□□□ -0.89
CD48-203ENST00000613788 HECTD4Q9Y4D8 3996 aa9.48□□□□□ -0.89
CD48-203ENST00000613788 LOC107984640A0A0U1RRK4 108 aa9.48□□□□□ -0.89
CD48-203ENST00000613788 C9orf116Q5BN46 136 aaPredicted RBP9.48□□□□□ -0.89
CD48-203ENST00000613788 PAM16Q9Y3D7 125 aa9.48□□□□□ -0.89
CD48-203ENST00000613788 ZNF815PA8K554 130 aa9.47□□□□□ -0.89
CD48-203ENST00000613788 C16orf90A8MZG2 172 aa9.47□□□□□ -0.89
CD48-203ENST00000613788 TLX1NBP0CAT3 122 aa9.47□□□□□ -0.89
CD48-203ENST00000613788 COX17Q14061 63 aa9.47□□□□□ -0.89
CD48-203ENST00000613788 LINC01620Q4KN68 170 aa9.47□□□□□ -0.89
CD48-203ENST00000613788 SDIM1Q6ZPB5 146 aa9.47□□□□□ -0.89
CD48-203ENST00000613788 PCP4L1A6NKN8 68 aa9.46□□□□□ -0.89
CD48-203ENST00000613788 NDUFC2-KCTD14E9PQ53 114 aa9.46□□□□□ -0.89
CD48-203ENST00000613788 SPATA45Q537H7 98 aa9.46□□□□□ -0.89
CD48-203ENST00000613788 MEIG1Q5JSS6 88 aa9.46□□□□□ -0.89
CD48-203ENST00000613788 ERG28Q9UKR5 140 aa9.46□□□□□ -0.89
CD48-203ENST00000613788 PFN2P35080 140 aa9.46□□□□□ -0.9
CD48-203ENST00000613788 CTAG1AP78358 180 aa9.46□□□□□ -0.9
CD48-203ENST00000613788 PCP2Q8IVA1 136 aa9.46□□□□□ -0.9
CD48-203ENST00000613788 TTTY13Q9BZ97 58 aa9.46□□□□□ -0.9
CD48-203ENST00000613788 RPL18AQ02543 176 aaKnown RBP9.45□□□□□ -0.9
CD48-203ENST00000613788 CIRBPQ14011 172 aaKnown RBP9.45□□□□□ -0.9
CD48-203ENST00000613788 A0A0J9YXY3 114 aa9.44□□□□□ -0.9
CD48-203ENST00000613788 LINC00158P58513 81 aa9.44□□□□□ -0.9
CD48-203ENST00000613788 GAGE2BQ13066 116 aa9.43□□□□□ -0.9
CD48-203ENST00000613788 Q6ZRP5 223 aa9.43□□□□□ -0.9
CD48-203ENST00000613788 LINC00474Q9P2X8 69 aa9.43□□□□□ -0.9
CD48-203ENST00000613788 DNAH5Q8TE73 4624 aa9.42□□□□□ -0.9
CD48-203ENST00000613788 SMIM13P0DJ93 91 aa9.42□□□□□ -0.9
CD48-203ENST00000613788 COX8AP10176 69 aa9.42□□□□□ -0.9
CD48-203ENST00000613788 KRTAP10-1P60331 282 aa9.42□□□□□ -0.9
CD48-203ENST00000613788 SCGB1D4Q6XE38 83 aa9.42□□□□□ -0.9
CD48-203ENST00000613788 A0A0U1RRA0 63 aa9.41□□□□□ -0.9
CD48-203ENST00000613788 PTTG1IPP53801 180 aa9.41□□□□□ -0.9
CD48-203ENST00000613788 GAGE2EQ4V326 116 aa9.41□□□□□ -0.9
CD48-203ENST00000613788 GAGE2DQ9UEU5 116 aa9.41□□□□□ -0.9
CD48-203ENST00000613788 A0A096LNI7 61 aa9.41□□□□□ -0.9
CD48-203ENST00000613788 IGKV2-24A0A0C4DH68 120 aa9.41□□□□□ -0.9
CD48-203ENST00000613788 TIMM17BO60830 172 aa9.41□□□□□ -0.9
CD48-203ENST00000613788 BOD1L2Q8IYS8 172 aa9.41□□□□□ -0.9
CD48-203ENST00000613788 DPH3Q96FX2 82 aa9.41□□□□□ -0.9
CD48-203ENST00000613788 C14orf144Q96I85 54 aa9.41□□□□□ -0.9
CD48-203ENST00000613788 PKHD1P08F94 4074 aa9.4□□□□□ -0.9
CD48-203ENST00000613788 DLEU1O43261 78 aa9.4□□□□□ -0.91
CD48-203ENST00000613788 MIR7-3HGQ8N6C7 128 aa9.39□□□□□ -0.91
CD48-203ENST00000613788 CHTF8P0CG12 524 aa9.38□□□□□ -0.91
CD48-203ENST00000613788 SLC25A34Q6PIV7 304 aa9.38□□□□□ -0.91
CD48-203ENST00000613788 TMEM238C9JI98 176 aa9.37□□□□□ -0.91
CD48-203ENST00000613788 SND1-IT1Q9HBX3 110 aa9.37□□□□□ -0.91
CD48-203ENST00000613788 XAGE1AQ9HD64 81 aa9.37□□□□□ -0.91
CD48-203ENST00000613788 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.37□□□□□ -0.91
CD48-203ENST00000613788 Q6ZSA8 131 aa9.36□□□□□ -0.91
CD48-203ENST00000613788 SPACA4Q8TDM5 124 aa9.36□□□□□ -0.91
CD48-203ENST00000613788 FAM30AQ9NZY2 134 aa9.36□□□□□ -0.91
CD48-203ENST00000613788 C9orf129Q5T035 196 aaKnown RBP9.36□□□□□ -0.91
CD48-203ENST00000613788 ADAMTSL4-AS1Q5T5F5 129 aa9.36□□□□□ -0.91
CD48-203ENST00000613788 LITAFQ99732 161 aa9.36□□□□□ -0.91
CD48-203ENST00000613788 DYNC1H1Q14204 4646 aaKnown RBP9.36□□□□□ -0.91
CD48-203ENST00000613788 PANO1I0J062 215 aa9.35□□□□□ -0.91
CD48-203ENST00000613788 Q6ZVH6 145 aa9.35□□□□□ -0.91
CD48-203ENST00000613788 DAND5Q8N907 189 aa9.35□□□□□ -0.91
CD48-203ENST00000613788 MIEN1Q9BRT3 115 aa9.34□□□□□ -0.91
CD48-203ENST00000613788 SPANXDQ9BXN6 97 aa9.34□□□□□ -0.91
CD48-203ENST00000613788 SPANXCQ9NY87 97 aa9.34□□□□□ -0.91
CD48-203ENST00000613788 A0A087WYN8 130 aa9.33□□□□□ -0.92
CD48-203ENST00000613788 COPS9Q8WXC6 57 aa9.33□□□□□ -0.92
CD48-203ENST00000613788 LRP1BQ9NZR2 4599 aa9.33□□□□□ -0.92
CD48-203ENST00000613788 LOC107984156A0A0G2JMH3 177 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms