RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 C11orf71Q6IPW1 123 aa2.77□□□□□ -1.97
HMGB1P50-201ENST00000605814 ZCCHC13Q8WW36 166 aaKnown RBP2.77□□□□□ -1.97
HMGB1P50-201ENST00000605814 C11orf68Q9H3H3 251 aaKnown RBP2.77□□□□□ -1.97
HMGB1P50-201ENST00000605814 CELA1Q9UNI1 258 aa2.77□□□□□ -1.97
HMGB1P50-201ENST00000605814 FRYQ5TBA9 3013 aa2.77□□□□□ -1.97
HMGB1P50-201ENST00000605814 TNRC18O15417 2968 aaPredicted RBP2.77□□□□□ -1.97
HMGB1P50-201ENST00000605814 A6NDX4 124 aa2.76□□□□□ -1.97
HMGB1P50-201ENST00000605814 ELOF1P60002 83 aaKnown RBP2.76□□□□□ -1.97
HMGB1P50-201ENST00000605814 DAD1P61803 113 aa2.76□□□□□ -1.97
HMGB1P50-201ENST00000605814 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P50-201ENST00000605814 Q6ZRP5 223 aa2.76□□□□□ -1.97
HMGB1P50-201ENST00000605814 Q8IZM0 81 aa2.76□□□□□ -1.97
HMGB1P50-201ENST00000605814 LINC00588Q9Y4M8 146 aa2.76□□□□□ -1.97
HMGB1P50-201ENST00000605814 XIRP2A4UGR9 3374 aa2.76□□□□□ -1.97
HMGB1P50-201ENST00000605814 MKI67P46013 3256 aaKnown RBP2.75□□□□□ -1.97
HMGB1P50-201ENST00000605814 TRBV6-8A0A0A6YYG3 113 aa2.75□□□□□ -1.97
HMGB1P50-201ENST00000605814 IGHV3-73A0A0B4J1V6 119 aa2.75□□□□□ -1.97
HMGB1P50-201ENST00000605814 IGHV4-61A0A0C4DH41 118 aa2.75□□□□□ -1.97
HMGB1P50-201ENST00000605814 LOC100131303A0A0U1RQF7 123 aa2.75□□□□□ -1.97
HMGB1P50-201ENST00000605814 CCL24O00175 119 aa2.75□□□□□ -1.97
HMGB1P50-201ENST00000605814 LPAL2Q16609 132 aa2.75□□□□□ -1.97
HMGB1P50-201ENST00000605814 DEFB109BQ30KR1 87 aa2.75□□□□□ -1.97
HMGB1P50-201ENST00000605814 CD164L2Q6UWJ8 174 aa2.75□□□□□ -1.97
HMGB1P50-201ENST00000605814 ATP11AUNQ6ZP68 121 aa2.75□□□□□ -1.97
HMGB1P50-201ENST00000605814 MRPL55Q7Z7F7 128 aaKnown RBP2.75□□□□□ -1.97
HMGB1P50-201ENST00000605814 APC2O95996 2303 aa2.74□□□□□ -1.97
HMGB1P50-201ENST00000605814 REV3LO60673 3130 aa2.74□□□□□ -1.97
HMGB1P50-201ENST00000605814 TRAV22A0A0B4J277 110 aa2.74□□□□□ -1.97
HMGB1P50-201ENST00000605814 A0A1B0GUV1 79 aa2.74□□□□□ -1.97
HMGB1P50-201ENST00000605814 M0R2N4 97 aa2.74□□□□□ -1.97
HMGB1P50-201ENST00000605814 IGHV3-11P01762 117 aa2.74□□□□□ -1.97
HMGB1P50-201ENST00000605814 IGKV4-1P06312 121 aa2.74□□□□□ -1.97
HMGB1P50-201ENST00000605814 COX7BP24311 80 aa2.74□□□□□ -1.97
HMGB1P50-201ENST00000605814 UBE2BP63146 152 aa2.74□□□□□ -1.97
HMGB1P50-201ENST00000605814 KTN1-AS1Q86SY8 53 aa2.74□□□□□ -1.97
HMGB1P50-201ENST00000605814 C1orf64Q8NEQ6 169 aa2.74□□□□□ -1.97
HMGB1P50-201ENST00000605814 LIMD2Q9BT23 127 aa2.74□□□□□ -1.97
HMGB1P50-201ENST00000605814 SORL1Q92673 2214 aa2.74□□□□□ -1.97
HMGB1P50-201ENST00000605814 SPTBN2O15020 2390 aa2.74□□□□□ -1.97
HMGB1P50-201ENST00000605814 SPTBN1Q01082 2364 aaKnown RBP2.74□□□□□ -1.97
HMGB1P50-201ENST00000605814 LAMA2P24043 3122 aaKnown RBP2.74□□□□□ -1.97
HMGB1P50-201ENST00000605814 ZZEF1O43149 2961 aa2.73□□□□□ -1.97
HMGB1P50-201ENST00000605814 IGKV3-7A0A075B6H7 116 aa2.73□□□□□ -1.97
HMGB1P50-201ENST00000605814 M0R378 163 aa2.73□□□□□ -1.97
HMGB1P50-201ENST00000605814 UBE2L6O14933 153 aa2.73□□□□□ -1.97
HMGB1P50-201ENST00000605814 PSCAO43653 123 aa2.73□□□□□ -1.97
HMGB1P50-201ENST00000605814 NDUFB1O75438 58 aa2.73□□□□□ -1.97
HMGB1P50-201ENST00000605814 IGLV6-57P01721 117 aa2.73□□□□□ -1.97
HMGB1P50-201ENST00000605814 IGHV4-30-4P0DP06 118 aa2.73□□□□□ -1.97
HMGB1P50-201ENST00000605814 SYCNQ0VAF6 134 aa2.73□□□□□ -1.97
HMGB1P50-201ENST00000605814 KIAA0087Q14695 138 aa2.73□□□□□ -1.97
HMGB1P50-201ENST00000605814 C6orf99Q4VX62 202 aa2.73□□□□□ -1.97
HMGB1P50-201ENST00000605814 ZNF843Q8N446 348 aa2.73□□□□□ -1.97
HMGB1P50-201ENST00000605814 ARRDC1-AS1Q9H2J1 176 aa2.73□□□□□ -1.97
HMGB1P50-201ENST00000605814 RETNQ9HD89 108 aa2.73□□□□□ -1.97
HMGB1P50-201ENST00000605814 RP1L1Q8IWN7 2480 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P50-201ENST00000605814 LAMA1P25391 3075 aa2.72□□□□□ -1.97
HMGB1P50-201ENST00000605814 A0A087X002 238 aa2.72□□□□□ -1.97
HMGB1P50-201ENST00000605814 LINC00959A0A1B0GUT2 108 aa2.72□□□□□ -1.97
HMGB1P50-201ENST00000605814 C19orf84I3L1E1 186 aa2.72□□□□□ -1.97
HMGB1P50-201ENST00000605814 INSP01308 110 aa2.72□□□□□ -1.97
HMGB1P50-201ENST00000605814 VPREB1P12018 145 aa2.72□□□□□ -1.97
HMGB1P50-201ENST00000605814 SPANXA2-OT1Q8N9U9 137 aa2.72□□□□□ -1.97
HMGB1P50-201ENST00000605814 TOMM7Q9P0U1 55 aa2.72□□□□□ -1.97
HMGB1P50-201ENST00000605814 RBM12B-AS1Q9P1G2 102 aa2.72□□□□□ -1.97
HMGB1P50-201ENST00000605814 CACNA1HO95180 2353 aa2.72□□□□□ -1.97
HMGB1P50-201ENST00000605814 TRIOO75962 3097 aa2.71□□□□□ -1.98
HMGB1P50-201ENST00000605814 A0A0J9YWU9 116 aa2.71□□□□□ -1.98
HMGB1P50-201ENST00000605814 LOC101927531A0A1B0GV80 90 aa2.71□□□□□ -1.98
HMGB1P50-201ENST00000605814 H3BPC8 53 aa2.71□□□□□ -1.98
HMGB1P50-201ENST00000605814 UBE2AP49459 152 aa2.71□□□□□ -1.98
HMGB1P50-201ENST00000605814 CMC4P56277 68 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P50-201ENST00000605814 DSCR9P59020 149 aa2.71□□□□□ -1.98
HMGB1P50-201ENST00000605814 DEFB131AP59861 70 aa2.71□□□□□ -1.98
HMGB1P50-201ENST00000605814 Q5VV11 94 aa2.71□□□□□ -1.98
HMGB1P50-201ENST00000605814 UBE2E2Q96LR5 201 aa2.71□□□□□ -1.98
HMGB1P50-201ENST00000605814 HIGD2AQ9BW72 106 aa2.71□□□□□ -1.98
HMGB1P50-201ENST00000605814 COL6A6A6NMZ7 2263 aa2.71□□□□□ -1.98
HMGB1P50-201ENST00000605814 GPR179Q6PRD1 2367 aa2.7□□□□□ -1.98
HMGB1P50-201ENST00000605814 IGLV4-60A0A075B6I1 120 aa2.7□□□□□ -1.98
HMGB1P50-201ENST00000605814 GVQW2A0A096LPI5 108 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P50-201ENST00000605814 ETDCA0A1B0GVM5 59 aa2.7□□□□□ -1.98
HMGB1P50-201ENST00000605814 A6NN06 94 aa2.7□□□□□ -1.98
HMGB1P50-201ENST00000605814 ODF3L2Q3SX64 289 aa2.7□□□□□ -1.98
HMGB1P50-201ENST00000605814 Q6ZQY7 126 aa2.7□□□□□ -1.98
HMGB1P50-201ENST00000605814 LINC00269Q8N2A0 174 aa2.7□□□□□ -1.98
HMGB1P50-201ENST00000605814 Q9BRP9 147 aa2.7□□□□□ -1.98
HMGB1P50-201ENST00000605814 CEP290O15078 2479 aa2.7□□□□□ -1.98
HMGB1P50-201ENST00000605814 DSPP15924 2871 aaKnown RBP2.7□□□□□ -1.98
HMGB1P50-201ENST00000605814 IGLV5-48A0A075B6I7 105 aa2.69□□□□□ -1.98
HMGB1P50-201ENST00000605814 TRGV2A0A075B6R0 118 aa2.69□□□□□ -1.98
HMGB1P50-201ENST00000605814 C16orf90A8MZG2 172 aa2.69□□□□□ -1.98
HMGB1P50-201ENST00000605814 PRR3P79522 188 aaKnown RBP2.69□□□□□ -1.98
HMGB1P50-201ENST00000605814 HIGD2BQ4VC39 106 aa2.69□□□□□ -1.98
HMGB1P50-201ENST00000605814 Q75L30 129 aa2.69□□□□□ -1.98
HMGB1P50-201ENST00000605814 DIRC1Q969H9 104 aa2.69□□□□□ -1.98
HMGB1P50-201ENST00000605814 LAMA3Q16787 3333 aa2.69□□□□□ -1.98
HMGB1P50-201ENST00000605814 KALRNO60229 2985 aa2.68□□□□□ -1.98
HMGB1P50-201ENST00000605814 FRYLO94915 3013 aa2.68□□□□□ -1.98
HMGB1P50-201ENST00000605814 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 880.7 ms