RNA–Protein interactions for RNA: ENST00000601253.5

SNRPA-209, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 519 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-209ENST00000601253 LEPROTL1O95214 131 aa8.8□□□□□ -1
SNRPA-209ENST00000601253 SMR3BP02814 79 aaPredicted RBP8.8□□□□□ -1
SNRPA-209ENST00000601253 CHTF8P0CG12 524 aa8.8□□□□□ -1
SNRPA-209ENST00000601253 CKS1BP61024 79 aa8.8□□□□□ -1
SNRPA-209ENST00000601253 C6orf226Q5I0X4 101 aa8.8□□□□□ -1
SNRPA-209ENST00000601253 UNQ6190/PRO20217Q6UXQ8 127 aa8.8□□□□□ -1
SNRPA-209ENST00000601253 DPH3Q96FX2 82 aa8.8□□□□□ -1
SNRPA-209ENST00000601253 TOMM7Q9P0U1 55 aa8.8□□□□□ -1
SNRPA-209ENST00000601253 HSPB8Q9UJY1 196 aa8.8□□□□□ -1
SNRPA-209ENST00000601253 IGKV2-24A0A0C4DH68 120 aa8.79□□□□□ -1
SNRPA-209ENST00000601253 TRBV30A0A0K0K1B3 111 aa8.79□□□□□ -1
SNRPA-209ENST00000601253 NUPR1O60356 82 aa8.79□□□□□ -1
SNRPA-209ENST00000601253 CXCL5P42830 114 aa8.79□□□□□ -1
SNRPA-209ENST00000601253 KRTAP17-1Q9BYP8 105 aa8.79□□□□□ -1
SNRPA-209ENST00000601253 CHTOPQ9Y3Y2 248 aaKnown RBP8.79□□□□□ -1
SNRPA-209ENST00000601253 ZNF22P17026 224 aaPredicted RBP8.78□□□□□ -1
SNRPA-209ENST00000601253 PTTG1IPP53801 180 aa8.78□□□□□ -1
SNRPA-209ENST00000601253 MAJINQ3KP22 176 aa8.78□□□□□ -1
SNRPA-209ENST00000601253 C10orf25Q5T742 122 aa8.78□□□□□ -1
SNRPA-209ENST00000601253 Q5VSD8 79 aa8.78□□□□□ -1
SNRPA-209ENST00000601253 C2orf82Q6UX34 121 aa8.78□□□□□ -1
SNRPA-209ENST00000601253 PLAC8Q9NZF1 115 aa8.78□□□□□ -1
SNRPA-209ENST00000601253 C6orf48Q9UBA6 75 aa8.78□□□□□ -1
SNRPA-209ENST00000601253 A0A087WYN8 130 aa8.77□□□□□ -1.01
SNRPA-209ENST00000601253 C11orf86A6NJI1 115 aa8.77□□□□□ -1.01
SNRPA-209ENST00000601253 F8VRH5 84 aa8.77□□□□□ -1.01
SNRPA-209ENST00000601253 SPINK8P0C7L1 97 aa8.77□□□□□ -1.01
SNRPA-209ENST00000601253 TLX1NBP0CAT3 122 aa8.77□□□□□ -1.01
SNRPA-209ENST00000601253 LINC00528Q8N1L1 170 aa8.77□□□□□ -1.01
SNRPA-209ENST00000601253 COX7B2Q8TF08 81 aa8.77□□□□□ -1.01
SNRPA-209ENST00000601253 FAT1Q14517 4588 aa8.76□□□□□ -1.01
SNRPA-209ENST00000601253 RPL18AQ02543 176 aaKnown RBP8.76□□□□□ -1.01
SNRPA-209ENST00000601253 GAGE2BQ13066 116 aa8.76□□□□□ -1.01
SNRPA-209ENST00000601253 IGLV5-39A0A0G2JS06 123 aa8.75□□□□□ -1.01
SNRPA-209ENST00000601253 PLA2G1BP04054 148 aaKnown RBP8.75□□□□□ -1.01
SNRPA-209ENST00000601253 FABP4P15090 132 aa8.75□□□□□ -1.01
SNRPA-209ENST00000601253 COA6Q5JTJ3 125 aaKnown RBP8.75□□□□□ -1.01
SNRPA-209ENST00000601253 TMEM170BQ5T4T1 132 aa8.75□□□□□ -1.01
SNRPA-209ENST00000601253 STPG4Q8N801 248 aa8.75□□□□□ -1.01
SNRPA-209ENST00000601253 NDUFC2-KCTD14E9PQ53 114 aa8.74□□□□□ -1.01
SNRPA-209ENST00000601253 CTAG1AP78358 180 aa8.74□□□□□ -1.01
SNRPA-209ENST00000601253 ODF1Q14990 250 aa8.74□□□□□ -1.01
SNRPA-209ENST00000601253 KRTAP4-5Q9BYR2 181 aa8.74□□□□□ -1.01
SNRPA-209ENST00000601253 Q6ZRP5 223 aa8.73□□□□□ -1.01
SNRPA-209ENST00000601253 H0Y8G0 127 aa8.72□□□□□ -1.01
SNRPA-209ENST00000601253 PLNP26678 52 aa8.72□□□□□ -1.01
SNRPA-209ENST00000601253 MAP1LC3CQ9BXW4 147 aa8.72□□□□□ -1.01
SNRPA-209ENST00000601253 ABCA13Q86UQ4 5058 aa8.71□□□□□ -1.01
SNRPA-209ENST00000601253 TMEM223A0PJW6 202 aa8.71□□□□□ -1.02
SNRPA-209ENST00000601253 SMIM6P0DI80 62 aa8.71□□□□□ -1.02
SNRPA-209ENST00000601253 SFTA2Q6UW10 78 aa8.71□□□□□ -1.02
SNRPA-209ENST00000601253 S100A6P06703 90 aa8.7□□□□□ -1.02
SNRPA-209ENST00000601253 C9orf116Q5BN46 136 aaPredicted RBP8.7□□□□□ -1.02
SNRPA-209ENST00000601253 C7orf33Q8WU49 177 aa8.7□□□□□ -1.02
SNRPA-209ENST00000601253 PCLOQ9Y6V0 5065 aa8.7□□□□□ -1.02
SNRPA-209ENST00000601253 DPM2O94777 84 aa8.69□□□□□ -1.02
SNRPA-209ENST00000601253 GAGE2EQ4V326 116 aa8.69□□□□□ -1.02
SNRPA-209ENST00000601253 C12orf57Q99622 126 aa8.69□□□□□ -1.02
SNRPA-209ENST00000601253 GAGE2DQ9UEU5 116 aa8.69□□□□□ -1.02
SNRPA-209ENST00000601253 A0A1W2PNN7 141 aa8.68□□□□□ -1.02
SNRPA-209ENST00000601253 C5orf52A6NGY3 159 aa8.68□□□□□ -1.02
SNRPA-209ENST00000601253 AKR1D1P51857 326 aa8.68□□□□□ -1.02
SNRPA-209ENST00000601253 RPL37AP61513 92 aaKnown RBP8.68□□□□□ -1.02
SNRPA-209ENST00000601253 SRRM2Q9UQ35 2752 aaKnown RBP8.68□□□□□ -1.02
SNRPA-209ENST00000601253 SYS1-DBNDD2H3BUS1 97 aa8.67□□□□□ -1.02
SNRPA-209ENST00000601253 VPS13BQ7Z7G8 4022 aa8.66□□□□□ -1.02
SNRPA-209ENST00000601253 IGKCP01834 107 aa8.66□□□□□ -1.02
SNRPA-209ENST00000601253 INAFM2P0DMQ5 153 aa8.66□□□□□ -1.02
SNRPA-209ENST00000601253 KRTAP10-4P60372 401 aaPredicted RBP8.66□□□□□ -1.02
SNRPA-209ENST00000601253 HERVK_113P61574 105 aa8.65□□□□□ -1.02
SNRPA-209ENST00000601253 C9orf129Q5T035 196 aaKnown RBP8.65□□□□□ -1.02
SNRPA-209ENST00000601253 PET117Q6UWS5 81 aa8.65□□□□□ -1.02
SNRPA-209ENST00000601253 ZNF625Q96I27 306 aaPredicted RBP8.65□□□□□ -1.02
SNRPA-209ENST00000601253 COX17Q14061 63 aa8.64□□□□□ -1.03
SNRPA-209ENST00000601253 PMCHL2Q9BQD1 86 aa8.64□□□□□ -1.03
SNRPA-209ENST00000601253 FAM168BA1KXE4 195 aa8.63□□□□□ -1.03
SNRPA-209ENST00000601253 LINC01545Q5VT33 79 aa8.63□□□□□ -1.03
SNRPA-209ENST00000601253 PLEKHB2Q96CS7 222 aa8.63□□□□□ -1.03
SNRPA-209ENST00000601253 ERG28Q9UKR5 140 aa8.63□□□□□ -1.03
SNRPA-209ENST00000601253 HERV-K104P63124 156 aa8.62□□□□□ -1.03
SNRPA-209ENST00000601253 FAM19A5Q7Z5A7 132 aaPredicted RBP8.62□□□□□ -1.03
SNRPA-209ENST00000601253 XAGE1AQ9HD64 81 aa8.62□□□□□ -1.03
SNRPA-209ENST00000601253 LEPROTO15243 131 aa8.61□□□□□ -1.03
SNRPA-209ENST00000601253 C3orf79P0CE67 100 aa8.61□□□□□ -1.03
SNRPA-209ENST00000601253 PFN2P35080 140 aa8.61□□□□□ -1.03
SNRPA-209ENST00000601253 SNRPEP62304 92 aaKnown RBP8.61□□□□□ -1.03
SNRPA-209ENST00000601253 MYMXA0A1B0GTQ4 84 aa8.6□□□□□ -1.03
SNRPA-209ENST00000601253 C20orf202A1L168 122 aa8.6□□□□□ -1.03
SNRPA-209ENST00000601253 PCP4L1A6NKN8 68 aa8.6□□□□□ -1.03
SNRPA-209ENST00000601253 LINC00587B1AMM8 73 aa8.6□□□□□ -1.03
SNRPA-209ENST00000601253 M0QXV9 152 aa8.6□□□□□ -1.03
SNRPA-209ENST00000601253 KRTDAPP60985 99 aa8.6□□□□□ -1.03
SNRPA-209ENST00000601253 PRR3P79522 188 aaKnown RBP8.6□□□□□ -1.03
SNRPA-209ENST00000601253 PHF5AQ7RTV0 110 aaKnown RBP8.6□□□□□ -1.03
SNRPA-209ENST00000601253 KRTAP7-1Q8IUC3 87 aa8.6□□□□□ -1.03
SNRPA-209ENST00000601253 NDUFA12Q9UI09 145 aa8.6□□□□□ -1.03
SNRPA-209ENST00000601253 PLA2G2DQ9UNK4 145 aa8.6□□□□□ -1.03
SNRPA-209ENST00000601253 J3QQQ9 107 aa8.59□□□□□ -1.03
SNRPA-209ENST00000601253 NMUP48645 174 aa8.59□□□□□ -1.03
SNRPA-209ENST00000601253 HIST3H2BBQ8N257 126 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms