RNA–Protein interactions for RNA: ENST00000600995.5

GTPBP3-223, Transcript of GTP binding protein 3, mitochondrial, human

TSL 2

Gene GTPBP3, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTPBP3-223	ENST00000600995	C2orf82	Q6UX34	121 aa		12.75	□□□□□ -0.37
GTPBP3-223	ENST00000600995	TOMM7	Q9P0U1	55 aa		12.75	□□□□□ -0.37
GTPBP3-223	ENST00000600995	FLG2	Q5D862	2391 aa	Predicted RBP	12.74	□□□□□ -0.37
GTPBP3-223	ENST00000600995	TRGC2	P03986	189 aa		12.74	□□□□□ -0.37
GTPBP3-223	ENST00000600995	SMIM1	B2RUZ4	78 aa		12.73	□□□□□ -0.37
GTPBP3-223	ENST00000600995	IGLC3	P0DOY3	106 aa		12.73	□□□□□ -0.37
GTPBP3-223	ENST00000600995	CXCL5	P42830	114 aa		12.73	□□□□□ -0.37
GTPBP3-223	ENST00000600995	COLCA2	A8K830	154 aa		12.72	□□□□□ -0.37
GTPBP3-223	ENST00000600995		H3BRM9	83 aa		12.72	□□□□□ -0.37
GTPBP3-223	ENST00000600995	NDUFA6	P56556	154 aa		12.72	□□□□□ -0.37
GTPBP3-223	ENST00000600995		Q6ZRP5	223 aa		12.72	□□□□□ -0.37
GTPBP3-223	ENST00000600995	NDUFC2-KCTD14	E9PQ53	114 aa		12.71	□□□□□ -0.37
GTPBP3-223	ENST00000600995	C9orf116	Q5BN46	136 aa	Predicted RBP	12.71	□□□□□ -0.37
GTPBP3-223	ENST00000600995	BAGE3	Q86Y29	109 aa		12.71	□□□□□ -0.37
GTPBP3-223	ENST00000600995		A0A1W2PNN7	141 aa		12.7	□□□□□ -0.38
GTPBP3-223	ENST00000600995		F8VRH5	84 aa		12.7	□□□□□ -0.38
GTPBP3-223	ENST00000600995	COX7B2	Q8TF08	81 aa		12.69	□□□□□ -0.38
GTPBP3-223	ENST00000600995	HSBP1	O75506	76 aa		12.68	□□□□□ -0.38
GTPBP3-223	ENST00000600995	KRTAP29-1	A8MX34	341 aa	Predicted RBP	12.67	□□□□□ -0.38
GTPBP3-223	ENST00000600995	SPINK8	P0C7L1	97 aa		12.67	□□□□□ -0.38
GTPBP3-223	ENST00000600995	GAGE2E	Q4V326	116 aa		12.67	□□□□□ -0.38
GTPBP3-223	ENST00000600995	GAGE2D	Q9UEU5	116 aa		12.67	□□□□□ -0.38
GTPBP3-223	ENST00000600995	TRAV12-1	A0A0B4J245	112 aa		12.66	□□□□□ -0.38
GTPBP3-223	ENST00000600995	IFI27L1	Q96BM0	104 aa		12.66	□□□□□ -0.38
GTPBP3-223	ENST00000600995	ZNF22	P17026	224 aa	Predicted RBP	12.65	□□□□□ -0.38
GTPBP3-223	ENST00000600995	HNRNPA3	P51991	378 aa	Known RBP	12.65	□□□□□ -0.38
GTPBP3-223	ENST00000600995	PRR3	P79522	188 aa	Known RBP	12.65	□□□□□ -0.38
GTPBP3-223	ENST00000600995	MYCBP2	O75592	4640 aa		12.65	□□□□□ -0.39
GTPBP3-223	ENST00000600995	IGLV5-39	A0A0G2JS06	123 aa		12.64	□□□□□ -0.39
GTPBP3-223	ENST00000600995	OXT	P01178	125 aa		12.64	□□□□□ -0.39
GTPBP3-223	ENST00000600995	FAM19A2	Q8N3H0	131 aa		12.63	□□□□□ -0.39
GTPBP3-223	ENST00000600995	CHTOP	Q9Y3Y2	248 aa	Known RBP	12.63	□□□□□ -0.39
GTPBP3-223	ENST00000600995	C11orf86	A6NJI1	115 aa		12.61	□□□□□ -0.39
GTPBP3-223	ENST00000600995	SERF1A	O75920	110 aa		12.61	□□□□□ -0.39
GTPBP3-223	ENST00000600995	PKHD1L1	Q86WI1	4243 aa		12.61	□□□□□ -0.39
GTPBP3-223	ENST00000600995	FAM168B	A1KXE4	195 aa		12.6	□□□□□ -0.39
GTPBP3-223	ENST00000600995		J3QL48	77 aa		12.6	□□□□□ -0.39
GTPBP3-223	ENST00000600995	C9orf129	Q5T035	196 aa	Known RBP	12.6	□□□□□ -0.39
GTPBP3-223	ENST00000600995	TMEM170B	Q5T4T1	132 aa		12.6	□□□□□ -0.39
GTPBP3-223	ENST00000600995	LEPROTL1	O95214	131 aa		12.59	□□□□□ -0.39
GTPBP3-223	ENST00000600995	LINC00310	P59036	64 aa		12.59	□□□□□ -0.39
GTPBP3-223	ENST00000600995	ODF1	Q14990	250 aa		12.59	□□□□□ -0.39
GTPBP3-223	ENST00000600995	PHF5A	Q7RTV0	110 aa	Known RBP	12.59	□□□□□ -0.39
GTPBP3-223	ENST00000600995	DMBT1	Q9UGM3	2413 aa	Predicted RBP	12.59	□□□□□ -0.39
GTPBP3-223	ENST00000600995	SCO1	O75880	301 aa		12.58	□□□□□ -0.4
GTPBP3-223	ENST00000600995	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	12.58	□□□□□ -0.4
GTPBP3-223	ENST00000600995	SFTA2	Q6UW10	78 aa		12.57	□□□□□ -0.4
GTPBP3-223	ENST00000600995	KRTAP7-1	Q8IUC3	87 aa		12.56	□□□□□ -0.4
GTPBP3-223	ENST00000600995	HSPB8	Q9UJY1	196 aa		12.56	□□□□□ -0.4
GTPBP3-223	ENST00000600995	SPINK6	Q6UWN8	80 aa		12.55	□□□□□ -0.4
GTPBP3-223	ENST00000600995	PSORS1C2	Q9UIG4	136 aa		12.55	□□□□□ -0.4
GTPBP3-223	ENST00000600995		M0QXV9	152 aa		12.54	□□□□□ -0.4
GTPBP3-223	ENST00000600995	NUPR1	O60356	82 aa		12.54	□□□□□ -0.4
GTPBP3-223	ENST00000600995	XAGE1A	Q9HD64	81 aa		12.54	□□□□□ -0.4
GTPBP3-223	ENST00000600995	TMEM223	A0PJW6	202 aa		12.53	□□□□□ -0.4
GTPBP3-223	ENST00000600995	SRSF9	Q13242	221 aa	Known RBP eCLIP	12.53	□□□□□ -0.4
GTPBP3-223	ENST00000600995	COX17	Q14061	63 aa		12.52	□□□□□ -0.41
GTPBP3-223	ENST00000600995	HIST1H2BK	O60814	126 aa		12.51	□□□□□ -0.41
GTPBP3-223	ENST00000600995	HIST1H2BJ	P06899	126 aa		12.51	□□□□□ -0.41
GTPBP3-223	ENST00000600995	HIST1H2BO	P23527	126 aa		12.51	□□□□□ -0.41
GTPBP3-223	ENST00000600995	HIST1H2BB	P33778	126 aa		12.51	□□□□□ -0.41
GTPBP3-223	ENST00000600995	HIST1H2BD	P58876	126 aa		12.51	□□□□□ -0.41
GTPBP3-223	ENST00000600995	HIST1H2BC	P62807	126 aa		12.51	□□□□□ -0.41
GTPBP3-223	ENST00000600995	HIST2H2BE	Q16778	126 aa		12.51	□□□□□ -0.41
GTPBP3-223	ENST00000600995	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	12.51	□□□□□ -0.41
GTPBP3-223	ENST00000600995	HIST1H2BH	Q93079	126 aa		12.51	□□□□□ -0.41
GTPBP3-223	ENST00000600995	HIST1H2BN	Q99877	126 aa		12.51	□□□□□ -0.41
GTPBP3-223	ENST00000600995	HIST1H2BM	Q99879	126 aa		12.51	□□□□□ -0.41
GTPBP3-223	ENST00000600995	PLA2G2D	Q9UNK4	145 aa		12.51	□□□□□ -0.41
GTPBP3-223	ENST00000600995	LBH	Q53QV2	105 aa	Predicted RBP	12.5	□□□□□ -0.41
GTPBP3-223	ENST00000600995	C1orf137	Q5JT78	98 aa		12.5	□□□□□ -0.41
GTPBP3-223	ENST00000600995	TP73-AS1	Q9UF72	201 aa		12.5	□□□□□ -0.41
GTPBP3-223	ENST00000600995	LRP1	Q07954	4544 aa	Known RBP	12.5	□□□□□ -0.41
GTPBP3-223	ENST00000600995	FABP4	P15090	132 aa		12.49	□□□□□ -0.41
GTPBP3-223	ENST00000600995	UBE2B	P63146	152 aa		12.49	□□□□□ -0.41
GTPBP3-223	ENST00000600995	SERTAD4-AS1	Q5TG53	156 aa		12.49	□□□□□ -0.41
GTPBP3-223	ENST00000600995	C22orf24	Q9Y442	160 aa		12.49	□□□□□ -0.41
GTPBP3-223	ENST00000600995	FAT3	Q8TDW7	4589 aa		12.49	□□□□□ -0.41
GTPBP3-223	ENST00000600995		H0Y8G0	127 aa		12.48	□□□□□ -0.41
GTPBP3-223	ENST00000600995	ZNF625	Q96I27	306 aa	Predicted RBP	12.48	□□□□□ -0.41
GTPBP3-223	ENST00000600995	ERG28	Q9UKR5	140 aa		12.48	□□□□□ -0.41
GTPBP3-223	ENST00000600995	PLN	P26678	52 aa		12.47	□□□□□ -0.41
GTPBP3-223	ENST00000600995	PFN2	P35080	140 aa		12.47	□□□□□ -0.41
GTPBP3-223	ENST00000600995	REG3G	Q6UW15	175 aa		12.46	□□□□□ -0.41
GTPBP3-223	ENST00000600995	KRTAP11-1	Q8IUC1	163 aa		12.46	□□□□□ -0.41
GTPBP3-223	ENST00000600995	MAP1LC3C	Q9BXW4	147 aa		12.46	□□□□□ -0.41
GTPBP3-223	ENST00000600995	IGLV7-43	P04211	117 aa		12.45	□□□□□ -0.42
GTPBP3-223	ENST00000600995	IGLV5-37	A0A075B6J1	123 aa		12.44	□□□□□ -0.42
GTPBP3-223	ENST00000600995	MRPL55	Q7Z7F7	128 aa	Known RBP	12.44	□□□□□ -0.42
GTPBP3-223	ENST00000600995	DPM2	O94777	84 aa		12.43	□□□□□ -0.42
GTPBP3-223	ENST00000600995	S100A1	P23297	94 aa		12.43	□□□□□ -0.42
GTPBP3-223	ENST00000600995	LINC01600	Q96MT4	127 aa		12.43	□□□□□ -0.42
GTPBP3-223	ENST00000600995	HERC1	Q15751	4861 aa		12.42	□□□□□ -0.42
GTPBP3-223	ENST00000600995	SND1-IT1	Q9HBX3	110 aa		12.42	□□□□□ -0.42
GTPBP3-223	ENST00000600995	IGKC	P01834	107 aa		12.41	□□□□□ -0.42
GTPBP3-223	ENST00000600995	HERV-K104	P63124	156 aa		12.41	□□□□□ -0.42
GTPBP3-223	ENST00000600995	LINC00587	B1AMM8	73 aa		12.4	□□□□□ -0.42
GTPBP3-223	ENST00000600995	COA6	Q5JTJ3	125 aa	Known RBP	12.4	□□□□□ -0.42
GTPBP3-223	ENST00000600995	LEPROT	O15243	131 aa		12.39	□□□□□ -0.43
GTPBP3-223	ENST00000600995	MT1HL1	P0DM35	61 aa		12.39	□□□□□ -0.43

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