RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 CIRBPQ14011 172 aaKnown RBP8.32□□□□□ -1.08
SRRM1-223ENST00000600523 KIAA0087Q14695 138 aa8.32□□□□□ -1.08
SRRM1-223ENST00000600523 UNQ6190/PRO20217Q6UXQ8 127 aa8.32□□□□□ -1.08
SRRM1-223ENST00000600523 SPACA4Q8TDM5 124 aa8.32□□□□□ -1.08
SRRM1-223ENST00000600523 COX7B2Q8TF08 81 aa8.32□□□□□ -1.08
SRRM1-223ENST00000600523 A0A096LNI7 61 aa8.31□□□□□ -1.08
SRRM1-223ENST00000600523 SMIM1B2RUZ4 78 aa8.31□□□□□ -1.08
SRRM1-223ENST00000600523 F8VRH5 84 aa8.31□□□□□ -1.08
SRRM1-223ENST00000600523 H0Y8G0 127 aa8.31□□□□□ -1.08
SRRM1-223ENST00000600523 CHTF8P0CG12 524 aa8.31□□□□□ -1.08
SRRM1-223ENST00000600523 Q5VSD8 79 aa8.31□□□□□ -1.08
SRRM1-223ENST00000600523 C2orf82Q6UX34 121 aa8.31□□□□□ -1.08
SRRM1-223ENST00000600523 LINC00528Q8N1L1 170 aa8.31□□□□□ -1.08
SRRM1-223ENST00000600523 MAP1LC3CQ9BXW4 147 aa8.31□□□□□ -1.08
SRRM1-223ENST00000600523 A0A087WYN8 130 aa8.3□□□□□ -1.08
SRRM1-223ENST00000600523 PTTG1IPP53801 180 aa8.3□□□□□ -1.08
SRRM1-223ENST00000600523 SFTA2Q6UW10 78 aa8.3□□□□□ -1.08
SRRM1-223ENST00000600523 STPG4Q8N801 248 aa8.3□□□□□ -1.08
SRRM1-223ENST00000600523 C7orf33Q8WU49 177 aa8.3□□□□□ -1.08
SRRM1-223ENST00000600523 KIAA1109Q2LD37 5005 aa8.3□□□□□ -1.08
SRRM1-223ENST00000600523 ZNF22P17026 224 aaPredicted RBP8.29□□□□□ -1.08
SRRM1-223ENST00000600523 LINC00310P59036 64 aa8.29□□□□□ -1.08
SRRM1-223ENST00000600523 C10orf25Q5T742 122 aa8.29□□□□□ -1.08
SRRM1-223ENST00000600523 C6orf48Q9UBA6 75 aa8.29□□□□□ -1.08
SRRM1-223ENST00000600523 C11orf86A6NJI1 115 aa8.28□□□□□ -1.08
SRRM1-223ENST00000600523 NDUFC2-KCTD14E9PQ53 114 aa8.28□□□□□ -1.08
SRRM1-223ENST00000600523 NUPR1O60356 82 aa8.28□□□□□ -1.08
SRRM1-223ENST00000600523 TLX1NBP0CAT3 122 aa8.28□□□□□ -1.08
SRRM1-223ENST00000600523 PLNP26678 52 aa8.28□□□□□ -1.08
SRRM1-223ENST00000600523 PLAC8Q9NZF1 115 aa8.28□□□□□ -1.08
SRRM1-223ENST00000600523 PANO1I0J062 215 aa8.27□□□□□ -1.09
SRRM1-223ENST00000600523 GAGE2EQ4V326 116 aa8.27□□□□□ -1.09
SRRM1-223ENST00000600523 GAGE2DQ9UEU5 116 aa8.27□□□□□ -1.09
SRRM1-223ENST00000600523 IGLV5-39A0A0G2JS06 123 aa8.26□□□□□ -1.09
SRRM1-223ENST00000600523 DPM2O94777 84 aa8.25□□□□□ -1.09
SRRM1-223ENST00000600523 HERVK_113P61574 105 aa8.25□□□□□ -1.09
SRRM1-223ENST00000600523 ODF1Q14990 250 aa8.25□□□□□ -1.09
SRRM1-223ENST00000600523 COA6Q5JTJ3 125 aaKnown RBP8.25□□□□□ -1.09
SRRM1-223ENST00000600523 APOBP04114 4563 aaKnown RBP8.25□□□□□ -1.09
SRRM1-223ENST00000600523 HSPG2P98160 4391 aa8.24□□□□□ -1.09
SRRM1-223ENST00000600523 RPL37AP61513 92 aaKnown RBP8.24□□□□□ -1.09
SRRM1-223ENST00000600523 Q6ZRP5 223 aa8.24□□□□□ -1.09
SRRM1-223ENST00000600523 TMEM223A0PJW6 202 aa8.23□□□□□ -1.09
SRRM1-223ENST00000600523 C9orf116Q5BN46 136 aaPredicted RBP8.23□□□□□ -1.09
SRRM1-223ENST00000600523 IGKCP01834 107 aa8.22□□□□□ -1.09
SRRM1-223ENST00000600523 S100A6P06703 90 aa8.22□□□□□ -1.09
SRRM1-223ENST00000600523 C20orf202A1L168 122 aa8.21□□□□□ -1.1
SRRM1-223ENST00000600523 SYS1-DBNDD2H3BUS1 97 aa8.21□□□□□ -1.1
SRRM1-223ENST00000600523 INAFM2P0DMQ5 153 aa8.21□□□□□ -1.1
SRRM1-223ENST00000600523 S100A2P29034 98 aa8.21□□□□□ -1.1
SRRM1-223ENST00000600523 COX17Q14061 63 aa8.21□□□□□ -1.1
SRRM1-223ENST00000600523 PET117Q6UWS5 81 aa8.21□□□□□ -1.1
SRRM1-223ENST00000600523 LINC00587B1AMM8 73 aa8.2□□□□□ -1.1
SRRM1-223ENST00000600523 PLEKHB2Q96CS7 222 aa8.2□□□□□ -1.1
SRRM1-223ENST00000600523 RYR1P21817 5038 aa8.2□□□□□ -1.1
SRRM1-223ENST00000600523 DNAH8Q96JB1 4490 aa8.19□□□□□ -1.1
SRRM1-223ENST00000600523 PFN2P35080 140 aa8.19□□□□□ -1.1
SRRM1-223ENST00000600523 AKR1D1P51857 326 aa8.19□□□□□ -1.1
SRRM1-223ENST00000600523 KRTDAPP60985 99 aa8.19□□□□□ -1.1
SRRM1-223ENST00000600523 HERV-K104P63124 156 aa8.19□□□□□ -1.1
SRRM1-223ENST00000600523 FAM19A5Q7Z5A7 132 aaPredicted RBP8.19□□□□□ -1.1
SRRM1-223ENST00000600523 PMCHL2Q9BQD1 86 aa8.19□□□□□ -1.1
SRRM1-223ENST00000600523 ERG28Q9UKR5 140 aa8.19□□□□□ -1.1
SRRM1-223ENST00000600523 HERC2O95714 4834 aa8.19□□□□□ -1.1
SRRM1-223ENST00000600523 MYMXA0A1B0GTQ4 84 aa8.18□□□□□ -1.1
SRRM1-223ENST00000600523 A0A1W2PNN7 141 aa8.18□□□□□ -1.1
SRRM1-223ENST00000600523 KRTAP4-5Q9BYR2 181 aa8.18□□□□□ -1.1
SRRM1-223ENST00000600523 XAGE1AQ9HD64 81 aa8.18□□□□□ -1.1
SRRM1-223ENST00000600523 LEPROTO15243 131 aa8.17□□□□□ -1.1
SRRM1-223ENST00000600523 LGALS3P17931 250 aaKnown RBP8.17□□□□□ -1.1
SRRM1-223ENST00000600523 ZNF625Q96I27 306 aaPredicted RBP8.17□□□□□ -1.1
SRRM1-223ENST00000600523 M0QXV9 152 aa8.16□□□□□ -1.1
SRRM1-223ENST00000600523 NMUP48645 174 aa8.16□□□□□ -1.1
SRRM1-223ENST00000600523 LINC00158P58513 81 aa8.16□□□□□ -1.1
SRRM1-223ENST00000600523 UBE2BP63146 152 aa8.16□□□□□ -1.1
SRRM1-223ENST00000600523 LBHQ53QV2 105 aaPredicted RBP8.16□□□□□ -1.1
SRRM1-223ENST00000600523 MEIG1Q5JSS6 88 aa8.16□□□□□ -1.1
SRRM1-223ENST00000600523 C9orf129Q5T035 196 aaKnown RBP8.16□□□□□ -1.1
SRRM1-223ENST00000600523 LINC01545Q5VT33 79 aa8.16□□□□□ -1.1
SRRM1-223ENST00000600523 KRTAP17-1Q9BYP8 105 aa8.16□□□□□ -1.1
SRRM1-223ENST00000600523 NDUFA12Q9UI09 145 aa8.16□□□□□ -1.1
SRRM1-223ENST00000600523 FAM168BA1KXE4 195 aa8.15□□□□□ -1.1
SRRM1-223ENST00000600523 J3QQQ9 107 aa8.15□□□□□ -1.1
SRRM1-223ENST00000600523 C3orf79P0CE67 100 aa8.15□□□□□ -1.1
SRRM1-223ENST00000600523 PHF5AQ7RTV0 110 aaKnown RBP8.14□□□□□ -1.11
SRRM1-223ENST00000600523 NKAPP1Q8N9T2 125 aa8.14□□□□□ -1.11
SRRM1-223ENST00000600523 PRR3P79522 188 aaKnown RBP8.13□□□□□ -1.11
SRRM1-223ENST00000600523 RPL24P83731 157 aaKnown RBP8.13□□□□□ -1.11
SRRM1-223ENST00000600523 E9PLD3 99 aa8.12□□□□□ -1.11
SRRM1-223ENST00000600523 SND1-IT1Q9HBX3 110 aa8.12□□□□□ -1.11
SRRM1-223ENST00000600523 TP73-AS1Q9UF72 201 aa8.12□□□□□ -1.11
SRRM1-223ENST00000600523 PLA2G2DQ9UNK4 145 aa8.12□□□□□ -1.11
SRRM1-223ENST00000600523 MRPL55Q7Z7F7 128 aaKnown RBP8.11□□□□□ -1.11
SRRM1-223ENST00000600523 HIST3H2BBQ8N257 126 aa8.11□□□□□ -1.11
SRRM1-223ENST00000600523 C22orf24Q9Y442 160 aa8.11□□□□□ -1.11
SRRM1-223ENST00000600523 A0A0U1RRA0 63 aa8.1□□□□□ -1.11
SRRM1-223ENST00000600523 SMIM13P0DJ93 91 aa8.1□□□□□ -1.11
SRRM1-223ENST00000600523 SERTAD4-AS1Q5TG53 156 aa8.1□□□□□ -1.11
SRRM1-223ENST00000600523 C1orf137Q5JT78 98 aa8.09□□□□□ -1.11
SRRM1-223ENST00000600523 HIST1H2BLQ99880 126 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms