RNA–Protein interactions for RNA: ENST00000600341.5

USF2-213, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 2

Gene USF2, Length 1,392 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-213ENST00000600341 CHTOPQ9Y3Y2 248 aaKnown RBP11.47□□□□□ -0.57
USF2-213ENST00000600341 TRAV12-1A0A0B4J245 112 aa11.46□□□□□ -0.57
USF2-213ENST00000600341 F8WDY8 70 aa11.46□□□□□ -0.57
USF2-213ENST00000600341 FABP4P15090 132 aa11.46□□□□□ -0.57
USF2-213ENST00000600341 Q8IZM0 81 aa11.45□□□□□ -0.58
USF2-213ENST00000600341 H0Y8G0 127 aa11.44□□□□□ -0.58
USF2-213ENST00000600341 PRSS2P07478 247 aa11.44□□□□□ -0.58
USF2-213ENST00000600341 RNF151Q2KHN1 245 aa11.44□□□□□ -0.58
USF2-213ENST00000600341 ABCA13Q86UQ4 5058 aa11.44□□□□□ -0.58
USF2-213ENST00000600341 LOC107984640A0A0U1RRK4 108 aa11.42□□□□□ -0.58
USF2-213ENST00000600341 F8VRH5 84 aa11.42□□□□□ -0.58
USF2-213ENST00000600341 H3BRM9 83 aa11.42□□□□□ -0.58
USF2-213ENST00000600341 ODF1Q14990 250 aa11.42□□□□□ -0.58
USF2-213ENST00000600341 MAJINQ3KP22 176 aa11.42□□□□□ -0.58
USF2-213ENST00000600341 C6orf226Q5I0X4 101 aa11.42□□□□□ -0.58
USF2-213ENST00000600341 COA6Q5JTJ3 125 aaKnown RBP11.42□□□□□ -0.58
USF2-213ENST00000600341 HSPB8Q9UJY1 196 aa11.42□□□□□ -0.58
USF2-213ENST00000600341 A0A087WYN8 130 aa11.41□□□□□ -0.58
USF2-213ENST00000600341 GAGE2BQ13066 116 aa11.41□□□□□ -0.58
USF2-213ENST00000600341 COX7B2Q8TF08 81 aa11.41□□□□□ -0.58
USF2-213ENST00000600341 IGLV5-39A0A0G2JS06 123 aa11.41□□□□□ -0.58
USF2-213ENST00000600341 PTTG1IPP53801 180 aa11.41□□□□□ -0.58
USF2-213ENST00000600341 CKS1BP61024 79 aa11.41□□□□□ -0.58
USF2-213ENST00000600341 RPL18AQ02543 176 aaKnown RBP11.41□□□□□ -0.58
USF2-213ENST00000600341 C9orf116Q5BN46 136 aaPredicted RBP11.41□□□□□ -0.58
USF2-213ENST00000600341 TMEM170BQ5T4T1 132 aa11.41□□□□□ -0.58
USF2-213ENST00000600341 TRBV30A0A0K0K1B3 111 aa11.4□□□□□ -0.59
USF2-213ENST00000600341 Q5VSD8 79 aa11.4□□□□□ -0.59
USF2-213ENST00000600341 DPH3Q96FX2 82 aa11.4□□□□□ -0.59
USF2-213ENST00000600341 PKIGQ9Y2B9 76 aa11.4□□□□□ -0.59
USF2-213ENST00000600341 Q6ZRP5 223 aa11.39□□□□□ -0.59
USF2-213ENST00000600341 LINC00528Q8N1L1 170 aa11.39□□□□□ -0.59
USF2-213ENST00000600341 PLAC8Q9NZF1 115 aa11.39□□□□□ -0.59
USF2-213ENST00000600341 TLX1NBP0CAT3 122 aa11.38□□□□□ -0.59
USF2-213ENST00000600341 STPG4Q8N801 248 aa11.38□□□□□ -0.59
USF2-213ENST00000600341 PMCHL2Q9BQD1 86 aa11.38□□□□□ -0.59
USF2-213ENST00000600341 EPM2AB3EWF7 344 aa11.37□□□□□ -0.59
USF2-213ENST00000600341 CXCL5P42830 114 aa11.37□□□□□ -0.59
USF2-213ENST00000600341 TMEM223A0PJW6 202 aa11.36□□□□□ -0.59
USF2-213ENST00000600341 LINC00474Q9P2X8 69 aa11.36□□□□□ -0.59
USF2-213ENST00000600341 MAP1LC3CQ9BXW4 147 aa11.35□□□□□ -0.59
USF2-213ENST00000600341 VPS13BQ7Z7G8 4022 aa11.34□□□□□ -0.59
USF2-213ENST00000600341 A0A1W2PNN7 141 aa11.34□□□□□ -0.59
USF2-213ENST00000600341 NDUFC2-KCTD14E9PQ53 114 aa11.34□□□□□ -0.59
USF2-213ENST00000600341 FAM229AH3BQW9 127 aa11.34□□□□□ -0.59
USF2-213ENST00000600341 GAGE2EQ4V326 116 aa11.34□□□□□ -0.59
USF2-213ENST00000600341 GAGE2DQ9UEU5 116 aa11.34□□□□□ -0.59
USF2-213ENST00000600341 PCLOQ9Y6V0 5065 aa11.33□□□□□ -0.6
USF2-213ENST00000600341 SYS1-DBNDD2H3BUS1 97 aa11.32□□□□□ -0.6
USF2-213ENST00000600341 DPM2O94777 84 aa11.31□□□□□ -0.6
USF2-213ENST00000600341 FAM168BA1KXE4 195 aa11.3□□□□□ -0.6
USF2-213ENST00000600341 PLNP26678 52 aa11.3□□□□□ -0.6
USF2-213ENST00000600341 KRTAP10-4P60372 401 aaPredicted RBP11.3□□□□□ -0.6
USF2-213ENST00000600341 C9orf129Q5T035 196 aaKnown RBP11.3□□□□□ -0.6
USF2-213ENST00000600341 IGKCP01834 107 aa11.29□□□□□ -0.6
USF2-213ENST00000600341 C3orf79P0CE67 100 aa11.29□□□□□ -0.6
USF2-213ENST00000600341 KRTAP7-1Q8IUC3 87 aa11.28□□□□□ -0.6
USF2-213ENST00000600341 ZNF625Q96I27 306 aaPredicted RBP11.28□□□□□ -0.6
USF2-213ENST00000600341 LINC01545Q5VT33 79 aa11.28□□□□□ -0.6
USF2-213ENST00000600341 TSPEAR-AS2P59090 65 aa11.27□□□□□ -0.61
USF2-213ENST00000600341 RPL37AP61513 92 aaKnown RBP11.27□□□□□ -0.61
USF2-213ENST00000600341 PET117Q6UWS5 81 aa11.27□□□□□ -0.61
USF2-213ENST00000600341 HIST3H2BBQ8N257 126 aa11.27□□□□□ -0.61
USF2-213ENST00000600341 XAGE1AQ9HD64 81 aa11.27□□□□□ -0.61
USF2-213ENST00000600341 PLA2G1BP04054 148 aaKnown RBP11.26□□□□□ -0.61
USF2-213ENST00000600341 KRTDAPP60985 99 aa11.26□□□□□ -0.61
USF2-213ENST00000600341 FAM19A5Q7Z5A7 132 aaPredicted RBP11.26□□□□□ -0.61
USF2-213ENST00000600341 PFN2P35080 140 aa11.24□□□□□ -0.61
USF2-213ENST00000600341 PHF5AQ7RTV0 110 aaKnown RBP11.24□□□□□ -0.61
USF2-213ENST00000600341 ERG28Q9UKR5 140 aa11.24□□□□□ -0.61
USF2-213ENST00000600341 LEPROTO15243 131 aa11.23□□□□□ -0.61
USF2-213ENST00000600341 SERTAD4-AS1Q5TG53 156 aa11.23□□□□□ -0.61
USF2-213ENST00000600341 C7orf33Q8WU49 177 aa11.23□□□□□ -0.61
USF2-213ENST00000600341 HERVK_113P61574 105 aa11.22□□□□□ -0.61
USF2-213ENST00000600341 HIST1H2BLQ99880 126 aa11.22□□□□□ -0.61
USF2-213ENST00000600341 SRRM2Q9UQ35 2752 aaKnown RBP11.22□□□□□ -0.61
USF2-213ENST00000600341 S100A6P06703 90 aa11.21□□□□□ -0.61
USF2-213ENST00000600341 INAFM2P0DMQ5 153 aa11.21□□□□□ -0.61
USF2-213ENST00000600341 SFTA2Q6UW10 78 aa11.21□□□□□ -0.61
USF2-213ENST00000600341 NDUFA12Q9UI09 145 aa11.21□□□□□ -0.61
USF2-213ENST00000600341 PLEKHB2Q96CS7 222 aa11.2□□□□□ -0.62
USF2-213ENST00000600341 J3QQQ9 107 aa11.19□□□□□ -0.62
USF2-213ENST00000600341 HNRNPA3P51991 378 aaKnown RBP11.19□□□□□ -0.62
USF2-213ENST00000600341 SNRPEP62304 92 aaKnown RBP11.19□□□□□ -0.62
USF2-213ENST00000600341 A0A0U1RRA0 63 aa11.18□□□□□ -0.62
USF2-213ENST00000600341 M0QXV9 152 aa11.18□□□□□ -0.62
USF2-213ENST00000600341 S100A2P29034 98 aa11.18□□□□□ -0.62
USF2-213ENST00000600341 KRTAP11-1Q8IUC1 163 aa11.18□□□□□ -0.62
USF2-213ENST00000600341 E9PLD3 99 aa11.17□□□□□ -0.62
USF2-213ENST00000600341 PRR3P79522 188 aaKnown RBP11.17□□□□□ -0.62
USF2-213ENST00000600341 COX17Q14061 63 aa11.17□□□□□ -0.62
USF2-213ENST00000600341 MYMXA0A1B0GTQ4 84 aa11.16□□□□□ -0.62
USF2-213ENST00000600341 SMIM13P0DJ93 91 aa11.16□□□□□ -0.62
USF2-213ENST00000600341 SND1-IT1Q9HBX3 110 aa11.16□□□□□ -0.62
USF2-213ENST00000600341 PKHD1L1Q86WI1 4243 aa11.16□□□□□ -0.62
USF2-213ENST00000600341 C5orf52A6NGY3 159 aa11.16□□□□□ -0.62
USF2-213ENST00000600341 LGALS3P17931 250 aaKnown RBP11.16□□□□□ -0.62
USF2-213ENST00000600341 LINC00158P58513 81 aa11.16□□□□□ -0.62
USF2-213ENST00000600341 HERV-K104P63124 156 aa11.16□□□□□ -0.62
USF2-213ENST00000600341 MEIG1Q5JSS6 88 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms