RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 CXCL5P42830 114 aa10.85□□□□□ -0.67
USHBP1-210ENST00000600286 COX7B2Q8TF08 81 aa10.85□□□□□ -0.67
USHBP1-210ENST00000600286 C3orf79P0CE67 100 aa10.83□□□□□ -0.68
USHBP1-210ENST00000600286 HERVK_113P61574 105 aa10.83□□□□□ -0.68
USHBP1-210ENST00000600286 SLPIP03973 132 aa10.82□□□□□ -0.68
USHBP1-210ENST00000600286 KIAA0087Q14695 138 aa10.82□□□□□ -0.68
USHBP1-210ENST00000600286 RNF151Q2KHN1 245 aa10.82□□□□□ -0.68
USHBP1-210ENST00000600286 HIST1H2BLQ99880 126 aa10.82□□□□□ -0.68
USHBP1-210ENST00000600286 PMCHL2Q9BQD1 86 aa10.82□□□□□ -0.68
USHBP1-210ENST00000600286 APOBP04114 4563 aaKnown RBP10.81□□□□□ -0.68
USHBP1-210ENST00000600286 C5orf52A6NGY3 159 aa10.81□□□□□ -0.68
USHBP1-210ENST00000600286 Q6ZRU5 148 aa10.81□□□□□ -0.68
USHBP1-210ENST00000600286 DNAH5Q8TE73 4624 aa10.8□□□□□ -0.68
USHBP1-210ENST00000600286 TRBV30A0A0K0K1B3 111 aa10.8□□□□□ -0.68
USHBP1-210ENST00000600286 TMEM223A0PJW6 202 aa10.8□□□□□ -0.68
USHBP1-210ENST00000600286 LINC01620Q4KN68 170 aa10.8□□□□□ -0.68
USHBP1-210ENST00000600286 LINC01545Q5VT33 79 aa10.8□□□□□ -0.68
USHBP1-210ENST00000600286 SFTA2Q6UW10 78 aa10.8□□□□□ -0.68
USHBP1-210ENST00000600286 UNQ6190/PRO20217Q6UXQ8 127 aa10.8□□□□□ -0.68
USHBP1-210ENST00000600286 DPH3Q96FX2 82 aa10.8□□□□□ -0.68
USHBP1-210ENST00000600286 IGLV5-39A0A0G2JS06 123 aa10.79□□□□□ -0.68
USHBP1-210ENST00000600286 LOC107984640A0A0U1RRK4 108 aa10.79□□□□□ -0.68
USHBP1-210ENST00000600286 KRTAP10-1P60331 282 aa10.79□□□□□ -0.68
USHBP1-210ENST00000600286 C2orf82Q6UX34 121 aa10.78□□□□□ -0.68
USHBP1-210ENST00000600286 TMA7Q9Y2S6 64 aaKnown RBP10.78□□□□□ -0.68
USHBP1-210ENST00000600286 SDIM1Q6ZPB5 146 aa10.77□□□□□ -0.69
USHBP1-210ENST00000600286 PLEKHB2Q96CS7 222 aa10.77□□□□□ -0.69
USHBP1-210ENST00000600286 LINC00474Q9P2X8 69 aa10.77□□□□□ -0.69
USHBP1-210ENST00000600286 C10orf25Q5T742 122 aa10.75□□□□□ -0.69
USHBP1-210ENST00000600286 C6orf48Q9UBA6 75 aa10.75□□□□□ -0.69
USHBP1-210ENST00000600286 LEPROTO15243 131 aa10.74□□□□□ -0.69
USHBP1-210ENST00000600286 RPL18AQ02543 176 aaKnown RBP10.74□□□□□ -0.69
USHBP1-210ENST00000600286 GAGE2BQ13066 116 aa10.73□□□□□ -0.69
USHBP1-210ENST00000600286 KRTAP4-5Q9BYR2 181 aa10.73□□□□□ -0.69
USHBP1-210ENST00000600286 IGKV2-24A0A0C4DH68 120 aa10.72□□□□□ -0.69
USHBP1-210ENST00000600286 MYMXA0A1B0GTQ4 84 aa10.72□□□□□ -0.69
USHBP1-210ENST00000600286 LGALS3P17931 250 aaKnown RBP10.72□□□□□ -0.69
USHBP1-210ENST00000600286 LINC00587B1AMM8 73 aa10.71□□□□□ -0.69
USHBP1-210ENST00000600286 NDUFC2-KCTD14E9PQ53 114 aa10.71□□□□□ -0.69
USHBP1-210ENST00000600286 CDK2AP2O75956 126 aa10.71□□□□□ -0.69
USHBP1-210ENST00000600286 SCGB1D1O95968 90 aa10.71□□□□□ -0.69
USHBP1-210ENST00000600286 TLX1NBP0CAT3 122 aa10.71□□□□□ -0.69
USHBP1-210ENST00000600286 HERV-K104P63124 156 aa10.71□□□□□ -0.69
USHBP1-210ENST00000600286 HSBP1L1C9JCN9 74 aa10.7□□□□□ -0.7
USHBP1-210ENST00000600286 E9PLD3 99 aa10.7□□□□□ -0.7
USHBP1-210ENST00000600286 J3QQQ9 107 aa10.7□□□□□ -0.7
USHBP1-210ENST00000600286 NMUP48645 174 aa10.7□□□□□ -0.7
USHBP1-210ENST00000600286 MAJINQ3KP22 176 aa10.7□□□□□ -0.7
USHBP1-210ENST00000600286 NDUFA12Q9UI09 145 aa10.7□□□□□ -0.7
USHBP1-210ENST00000600286 PTTG1IPP53801 180 aa10.69□□□□□ -0.7
USHBP1-210ENST00000600286 GAGE2EQ4V326 116 aa10.69□□□□□ -0.7
USHBP1-210ENST00000600286 C9orf116Q5BN46 136 aaPredicted RBP10.69□□□□□ -0.7
USHBP1-210ENST00000600286 Q6ZSA8 131 aa10.69□□□□□ -0.7
USHBP1-210ENST00000600286 GAGE2DQ9UEU5 116 aa10.69□□□□□ -0.7
USHBP1-210ENST00000600286 A0A096LNI7 61 aa10.68□□□□□ -0.7
USHBP1-210ENST00000600286 COX17Q14061 63 aa10.68□□□□□ -0.7
USHBP1-210ENST00000600286 STPG4Q8N801 248 aa10.68□□□□□ -0.7
USHBP1-210ENST00000600286 FAM30AQ9NZY2 134 aa10.68□□□□□ -0.7
USHBP1-210ENST00000600286 MEIG1Q5JSS6 88 aa10.67□□□□□ -0.7
USHBP1-210ENST00000600286 ATOH7Q8N100 152 aa10.67□□□□□ -0.7
USHBP1-210ENST00000600286 ZNF625Q96I27 306 aaPredicted RBP10.67□□□□□ -0.7
USHBP1-210ENST00000600286 ERG28Q9UKR5 140 aa10.67□□□□□ -0.7
USHBP1-210ENST00000600286 CHTF8P0CG12 524 aa10.66□□□□□ -0.7
USHBP1-210ENST00000600286 PFN2P35080 140 aa10.66□□□□□ -0.7
USHBP1-210ENST00000600286 Q6ZRP5 223 aa10.66□□□□□ -0.7
USHBP1-210ENST00000600286 SPACA4Q8TDM5 124 aa10.66□□□□□ -0.7
USHBP1-210ENST00000600286 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.66□□□□□ -0.7
USHBP1-210ENST00000600286 LINC00158P58513 81 aa10.65□□□□□ -0.7
USHBP1-210ENST00000600286 CIRBPQ14011 172 aaKnown RBP10.65□□□□□ -0.7
USHBP1-210ENST00000600286 A0A087WYN8 130 aa10.63□□□□□ -0.71
USHBP1-210ENST00000600286 XGP55808 180 aa10.63□□□□□ -0.71
USHBP1-210ENST00000600286 SCXQ7RTU7 201 aa10.63□□□□□ -0.71
USHBP1-210ENST00000600286 CIRBP-AS1Q8TBR5 109 aa10.63□□□□□ -0.71
USHBP1-210ENST00000600286 TSPEAR-AS2P59090 65 aa10.62□□□□□ -0.71
USHBP1-210ENST00000600286 PANO1I0J062 215 aa10.61□□□□□ -0.71
USHBP1-210ENST00000600286 PLAC8Q9NZF1 115 aa10.61□□□□□ -0.71
USHBP1-210ENST00000600286 ZNF815PA8K554 130 aa10.6□□□□□ -0.71
USHBP1-210ENST00000600286 A0A0U1RRA0 63 aa10.59□□□□□ -0.71
USHBP1-210ENST00000600286 SMIM13P0DJ93 91 aa10.59□□□□□ -0.71
USHBP1-210ENST00000600286 HAMPP81172 84 aa10.59□□□□□ -0.71
USHBP1-210ENST00000600286 JOSD1Q15040 202 aaPredicted RBP10.59□□□□□ -0.71
USHBP1-210ENST00000600286 XAGE1AQ9HD64 81 aa10.59□□□□□ -0.71
USHBP1-210ENST00000600286 ANKRD39Q53RE8 183 aa10.58□□□□□ -0.72
USHBP1-210ENST00000600286 C7orf33Q8WU49 177 aa10.58□□□□□ -0.72
USHBP1-210ENST00000600286 IGKV2D-26A0A0A0MRZ7 120 aa10.57□□□□□ -0.72
USHBP1-210ENST00000600286 FAM229AH3BQW9 127 aa10.57□□□□□ -0.72
USHBP1-210ENST00000600286 SCGB1D4Q6XE38 83 aa10.57□□□□□ -0.72
USHBP1-210ENST00000600286 RPL24P83731 157 aaKnown RBP10.56□□□□□ -0.72
USHBP1-210ENST00000600286 C9orf129Q5T035 196 aaKnown RBP10.56□□□□□ -0.72
USHBP1-210ENST00000600286 FAM19A5Q7Z5A7 132 aaPredicted RBP10.56□□□□□ -0.72
USHBP1-210ENST00000600286 SND1-IT1Q9HBX3 110 aa10.56□□□□□ -0.72
USHBP1-210ENST00000600286 A0A0J9YXY3 114 aa10.55□□□□□ -0.72
USHBP1-210ENST00000600286 A0A1W2PNN7 141 aa10.55□□□□□ -0.72
USHBP1-210ENST00000600286 SMR3BP02814 79 aaPredicted RBP10.55□□□□□ -0.72
USHBP1-210ENST00000600286 MIR7-3HGQ8N6C7 128 aa10.55□□□□□ -0.72
USHBP1-210ENST00000600286 MIEN1Q9BRT3 115 aa10.55□□□□□ -0.72
USHBP1-210ENST00000600286 DNAH8Q96JB1 4490 aa10.54□□□□□ -0.72
USHBP1-210ENST00000600286 FAT1Q14517 4588 aa10.54□□□□□ -0.72
USHBP1-210ENST00000600286 LBHQ53QV2 105 aaPredicted RBP10.54□□□□□ -0.72
USHBP1-210ENST00000600286 VAMP8Q9BV40 100 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms