RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 TRAV13-1A0A0B4J241 112 aa10.74□□□□□ -0.69
SSBP4-207ENST00000600244 IFITM10A6NMD0 228 aa10.74□□□□□ -0.69
SSBP4-207ENST00000600244 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.74□□□□□ -0.69
SSBP4-207ENST00000600244 ATP5LO75964 103 aa10.74□□□□□ -0.69
SSBP4-207ENST00000600244 CD164L2Q6UWJ8 174 aa10.74□□□□□ -0.69
SSBP4-207ENST00000600244 FAM19A3Q7Z5A8 133 aa10.74□□□□□ -0.69
SSBP4-207ENST00000600244 GAGE12HA6NDE8 117 aa10.73□□□□□ -0.69
SSBP4-207ENST00000600244 LINC00242Q5T6M2 205 aa10.73□□□□□ -0.69
SSBP4-207ENST00000600244 XCL1P47992 114 aa10.72□□□□□ -0.69
SSBP4-207ENST00000600244 C2orf88Q9BSF0 95 aa10.72□□□□□ -0.69
SSBP4-207ENST00000600244 CST9LQ9H4G1 147 aa10.72□□□□□ -0.69
SSBP4-207ENST00000600244 IGHV3OR16-9A0A0B4J2B5 98 aa10.71□□□□□ -0.69
SSBP4-207ENST00000600244 NDUFA6P56556 154 aa10.71□□□□□ -0.69
SSBP4-207ENST00000600244 PMVKQ15126 192 aa10.71□□□□□ -0.69
SSBP4-207ENST00000600244 A0A096LNI7 61 aa10.7□□□□□ -0.7
SSBP4-207ENST00000600244 IFI27L1Q96BM0 104 aa10.7□□□□□ -0.7
SSBP4-207ENST00000600244 LEPROTL1O95214 131 aa10.68□□□□□ -0.7
SSBP4-207ENST00000600244 C15orf56Q8N910 161 aa10.68□□□□□ -0.7
SSBP4-207ENST00000600244 PACRGQ96M98 296 aaPredicted RBP10.67□□□□□ -0.7
SSBP4-207ENST00000600244 MUC17Q685J3 4493 aa10.66□□□□□ -0.7
SSBP4-207ENST00000600244 COX7A2LO14548 114 aa10.66□□□□□ -0.7
SSBP4-207ENST00000600244 SEC11AP67812 179 aa10.66□□□□□ -0.7
SSBP4-207ENST00000600244 HSPB8Q9UJY1 196 aa10.66□□□□□ -0.7
SSBP4-207ENST00000600244 IGLV4-69A0A075B6H9 119 aa10.65□□□□□ -0.7
SSBP4-207ENST00000600244 IGLV5-45A0A087WSX0 123 aa10.65□□□□□ -0.7
SSBP4-207ENST00000600244 A0A087WZ39 114 aa10.65□□□□□ -0.7
SSBP4-207ENST00000600244 TRAV12-1A0A0B4J245 112 aa10.65□□□□□ -0.7
SSBP4-207ENST00000600244 TINCRA0A1B0GVN0 87 aa10.65□□□□□ -0.7
SSBP4-207ENST00000600244 IGLC3P0DOY3 106 aa10.65□□□□□ -0.7
SSBP4-207ENST00000600244 C5orf38Q86SI9 138 aa10.65□□□□□ -0.7
SSBP4-207ENST00000600244 LINC01561Q8N1V8 128 aa10.65□□□□□ -0.7
SSBP4-207ENST00000600244 LINC00474Q9P2X8 69 aa10.65□□□□□ -0.7
SSBP4-207ENST00000600244 GVQW2A0A096LPI5 108 aaPredicted RBP10.64□□□□□ -0.71
SSBP4-207ENST00000600244 IGHV1-58A0A0C4DH39 117 aa10.64□□□□□ -0.71
SSBP4-207ENST00000600244 FABP4P15090 132 aa10.64□□□□□ -0.71
SSBP4-207ENST00000600244 HERVK_113P63121 156 aa10.64□□□□□ -0.71
SSBP4-207ENST00000600244 CFAP161Q6P656 301 aa10.64□□□□□ -0.71
SSBP4-207ENST00000600244 GEMIN7Q9H840 131 aaKnown RBP10.62□□□□□ -0.71
SSBP4-207ENST00000600244 CDKN2A-AS1Q9UH64 79 aa10.62□□□□□ -0.71
SSBP4-207ENST00000600244 HIST3H2BBQ8N257 126 aa10.61□□□□□ -0.71
SSBP4-207ENST00000600244 F8VRH5 84 aa10.6□□□□□ -0.71
SSBP4-207ENST00000600244 MALP21145 153 aa10.6□□□□□ -0.71
SSBP4-207ENST00000600244 HIGD2BQ4VC39 106 aa10.6□□□□□ -0.71
SSBP4-207ENST00000600244 CHTOPQ9Y3Y2 248 aaKnown RBP10.6□□□□□ -0.71
SSBP4-207ENST00000600244 IGLV1-50A0A075B6I6 118 aa10.59□□□□□ -0.71
SSBP4-207ENST00000600244 C5orf52A6NGY3 159 aa10.59□□□□□ -0.71
SSBP4-207ENST00000600244 C11orf86A6NJI1 115 aa10.59□□□□□ -0.71
SSBP4-207ENST00000600244 APOMO95445 188 aa10.59□□□□□ -0.71
SSBP4-207ENST00000600244 MAP1LC3CQ9BXW4 147 aa10.59□□□□□ -0.71
SSBP4-207ENST00000600244 MRPL35Q9NZE8 188 aaKnown RBP10.59□□□□□ -0.71
SSBP4-207ENST00000600244 S100A6P06703 90 aa10.58□□□□□ -0.72
SSBP4-207ENST00000600244 ZNF22P17026 224 aaPredicted RBP10.58□□□□□ -0.72
SSBP4-207ENST00000600244 OR10D4PQ8NGN7 298 aa10.58□□□□□ -0.72
SSBP4-207ENST00000600244 SYS1-DBNDD2H3BUS1 97 aa10.57□□□□□ -0.72
SSBP4-207ENST00000600244 KIAA0087Q14695 138 aa10.57□□□□□ -0.72
SSBP4-207ENST00000600244 LINC00469Q8N7U9 141 aa10.57□□□□□ -0.72
SSBP4-207ENST00000600244 DIRC1Q969H9 104 aa10.57□□□□□ -0.72
SSBP4-207ENST00000600244 SMIM1B2RUZ4 78 aa10.56□□□□□ -0.72
SSBP4-207ENST00000600244 C3orf79P0CE67 100 aa10.56□□□□□ -0.72
SSBP4-207ENST00000600244 SNRPEP62304 92 aaKnown RBP10.56□□□□□ -0.72
SSBP4-207ENST00000600244 ORAOV1Q8WV07 137 aa10.56□□□□□ -0.72
SSBP4-207ENST00000600244 HIST1H2BLQ99880 126 aa10.56□□□□□ -0.72
SSBP4-207ENST00000600244 KRTAP1-4P0C5Y4 121 aa10.55□□□□□ -0.72
SSBP4-207ENST00000600244 SPAG11BQ08648 103 aa10.55□□□□□ -0.72
SSBP4-207ENST00000600244 LINC00526Q96FQ7 95 aa10.55□□□□□ -0.72
SSBP4-207ENST00000600244 C2orf48Q96LS8 159 aa10.55□□□□□ -0.72
SSBP4-207ENST00000600244 H0Y8G0 127 aa10.54□□□□□ -0.72
SSBP4-207ENST00000600244 ZNF561-AS1K7EIQ3 104 aa10.54□□□□□ -0.72
SSBP4-207ENST00000600244 LINC01545Q5VT33 79 aa10.54□□□□□ -0.72
SSBP4-207ENST00000600244 PET117Q6UWS5 81 aa10.54□□□□□ -0.72
SSBP4-207ENST00000600244 IGLV5-39A0A0G2JS06 123 aa10.53□□□□□ -0.72
SSBP4-207ENST00000600244 F8WDY8 70 aa10.53□□□□□ -0.72
SSBP4-207ENST00000600244 H3BRM9 83 aa10.53□□□□□ -0.72
SSBP4-207ENST00000600244 C1orf137Q5JT78 98 aa10.53□□□□□ -0.72
SSBP4-207ENST00000600244 PKIGQ9Y2B9 76 aa10.53□□□□□ -0.72
SSBP4-207ENST00000600244 A0A1W2PNN7 141 aa10.52□□□□□ -0.73
SSBP4-207ENST00000600244 H0Y9J4 135 aa10.52□□□□□ -0.73
SSBP4-207ENST00000600244 SPINK8P0C7L1 97 aa10.52□□□□□ -0.73
SSBP4-207ENST00000600244 PLNP26678 52 aa10.52□□□□□ -0.73
SSBP4-207ENST00000600244 S100A2P29034 98 aa10.52□□□□□ -0.73
SSBP4-207ENST00000600244 Q8IZM0 81 aa10.52□□□□□ -0.73
SSBP4-207ENST00000600244 TMEM223A0PJW6 202 aa10.51□□□□□ -0.73
SSBP4-207ENST00000600244 DPM2O94777 84 aa10.51□□□□□ -0.73
SSBP4-207ENST00000600244 TMEM170BQ5T4T1 132 aa10.51□□□□□ -0.73
SSBP4-207ENST00000600244 PMCHL2Q9BQD1 86 aa10.51□□□□□ -0.73
SSBP4-207ENST00000600244 IGLV7-43P04211 117 aa10.5□□□□□ -0.73
SSBP4-207ENST00000600244 KRTDAPP60985 99 aa10.5□□□□□ -0.73
SSBP4-207ENST00000600244 SYCNQ0VAF6 134 aa10.5□□□□□ -0.73
SSBP4-207ENST00000600244 IGKCP01834 107 aa10.49□□□□□ -0.73
SSBP4-207ENST00000600244 PTTG1IPP53801 180 aa10.49□□□□□ -0.73
SSBP4-207ENST00000600244 RNF151Q2KHN1 245 aa10.48□□□□□ -0.73
SSBP4-207ENST00000600244 C10orf25Q5T742 122 aa10.48□□□□□ -0.73
SSBP4-207ENST00000600244 COX7B2Q8TF08 81 aa10.48□□□□□ -0.73
SSBP4-207ENST00000600244 CARD19Q96LW7 228 aa10.48□□□□□ -0.73
SSBP4-207ENST00000600244 CAMK2N2Q96S95 79 aa10.48□□□□□ -0.73
SSBP4-207ENST00000600244 NDUFA1O15239 70 aa10.47□□□□□ -0.73
SSBP4-207ENST00000600244 RPL13AP40429 203 aaKnown RBP10.47□□□□□ -0.73
SSBP4-207ENST00000600244 C2orf82Q6UX34 121 aa10.47□□□□□ -0.73
SSBP4-207ENST00000600244 UNQ6190/PRO20217Q6UXQ8 127 aa10.47□□□□□ -0.73
SSBP4-207ENST00000600244 TOMM7Q9P0U1 55 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms