RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 CST9LP1Q5W188 147 aa2.09□□□□□ -2.07
HERC3-213ENST00000598772 SMIM15Q7Z3B0 74 aa2.09□□□□□ -2.07
HERC3-213ENST00000598772 COX8CQ7Z4L0 72 aa2.09□□□□□ -2.07
HERC3-213ENST00000598772 BAGE2Q86Y30 109 aa2.09□□□□□ -2.07
HERC3-213ENST00000598772 RBM38Q9H0Z9 239 aaKnown RBP2.09□□□□□ -2.07
HERC3-213ENST00000598772 RBM12B-AS1Q9P1G2 102 aa2.09□□□□□ -2.07
HERC3-213ENST00000598772 IGLV5-37A0A075B6J1 123 aa2.08□□□□□ -2.08
HERC3-213ENST00000598772 PRSS47A8MTI9 375 aa2.08□□□□□ -2.08
HERC3-213ENST00000598772 NDUFB6O95139 128 aa2.08□□□□□ -2.08
HERC3-213ENST00000598772 RAB5AP20339 215 aa2.08□□□□□ -2.08
HERC3-213ENST00000598772 HBBP68871 147 aa2.08□□□□□ -2.08
HERC3-213ENST00000598772 DEDD2Q8WXF8 326 aa2.08□□□□□ -2.08
HERC3-213ENST00000598772 IMUPQ9GZP8 106 aa2.08□□□□□ -2.08
HERC3-213ENST00000598772 F2Z2F3 143 aa2.07□□□□□ -2.08
HERC3-213ENST00000598772 F8VRH5 84 aa2.07□□□□□ -2.08
HERC3-213ENST00000598772 LINC00483Q53H64 154 aa2.07□□□□□ -2.08
HERC3-213ENST00000598772 KRTAP5-10Q6L8G5 202 aa2.07□□□□□ -2.08
HERC3-213ENST00000598772 TEX261Q6UWH6 196 aa2.07□□□□□ -2.08
HERC3-213ENST00000598772 PCP2Q8IVA1 136 aa2.07□□□□□ -2.08
HERC3-213ENST00000598772 TMEM18Q96B42 140 aa2.07□□□□□ -2.08
HERC3-213ENST00000598772 ACTR3CQ9C0K3 210 aaPredicted RBP2.07□□□□□ -2.08
HERC3-213ENST00000598772 CSDC2Q9Y534 153 aaKnown RBP2.07□□□□□ -2.08
HERC3-213ENST00000598772 LOC107984156A0A0G2JMH3 177 aa2.06□□□□□ -2.08
HERC3-213ENST00000598772 ETDCA0A1B0GVM5 59 aa2.06□□□□□ -2.08
HERC3-213ENST00000598772 FAM74A7A6NL05 159 aa2.06□□□□□ -2.08
HERC3-213ENST00000598772 A8MWP4 228 aa2.06□□□□□ -2.08
HERC3-213ENST00000598772 IGLC6P0CF74 106 aa2.06□□□□□ -2.08
HERC3-213ENST00000598772 KRTAP10-5P60370 271 aa2.06□□□□□ -2.08
HERC3-213ENST00000598772 RPL39P62891 51 aaKnown RBP2.06□□□□□ -2.08
HERC3-213ENST00000598772 C1orf195Q5TG92 126 aa2.06□□□□□ -2.08
HERC3-213ENST00000598772 Q6ZN92 141 aa2.06□□□□□ -2.08
HERC3-213ENST00000598772 ARL17AQ8IVW1 177 aa2.06□□□□□ -2.08
HERC3-213ENST00000598772 NRACQ8N912 160 aa2.06□□□□□ -2.08
HERC3-213ENST00000598772 OBSCN-AS1Q96MR7 158 aa2.06□□□□□ -2.08
HERC3-213ENST00000598772 NKX6-2Q9C056 277 aaPredicted RBP2.06□□□□□ -2.08
HERC3-213ENST00000598772 A0A0G2JQZ4 141 aa2.05□□□□□ -2.08
HERC3-213ENST00000598772 XKRY2A2RUG3 117 aa2.05□□□□□ -2.08
HERC3-213ENST00000598772 CCDC160A6NGH7 325 aa2.05□□□□□ -2.08
HERC3-213ENST00000598772 A8MWL6 223 aa2.05□□□□□ -2.08
HERC3-213ENST00000598772 VCYO14598 125 aa2.05□□□□□ -2.08
HERC3-213ENST00000598772 ERC2-IT1O76042 136 aa2.05□□□□□ -2.08
HERC3-213ENST00000598772 PFN2P35080 140 aa2.05□□□□□ -2.08
HERC3-213ENST00000598772 SUMO2P61956 95 aaKnown RBP2.05□□□□□ -2.08
HERC3-213ENST00000598772 RPL24P83731 157 aaKnown RBP2.05□□□□□ -2.08
HERC3-213ENST00000598772 C10orf91Q5T1B1 145 aa2.05□□□□□ -2.08
HERC3-213ENST00000598772 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
HERC3-213ENST00000598772 SEC22CQ9BRL7 303 aa2.05□□□□□ -2.08
HERC3-213ENST00000598772 VCX3AQ9NNX9 186 aa2.05□□□□□ -2.08
HERC3-213ENST00000598772 PYGO1Q9Y3Y4 419 aa2.05□□□□□ -2.08
HERC3-213ENST00000598772 TRBV6-5A0A0K0K1A5 114 aa2.04□□□□□ -2.08
HERC3-213ENST00000598772 SIX6O95475 246 aa2.04□□□□□ -2.08
HERC3-213ENST00000598772 GIPP09681 153 aaPredicted RBP2.04□□□□□ -2.08
HERC3-213ENST00000598772 VPREB1P12018 145 aa2.04□□□□□ -2.08
HERC3-213ENST00000598772 ATP6V0CP27449 155 aa2.04□□□□□ -2.08
HERC3-213ENST00000598772 POLR2KP53803 58 aaKnown RBP2.04□□□□□ -2.08
HERC3-213ENST00000598772 KRTAP8-1Q8IUC2 63 aa2.04□□□□□ -2.08
HERC3-213ENST00000598772 FAM210AQ96ND0 272 aa2.04□□□□□ -2.08
HERC3-213ENST00000598772 TIMM21Q9BVV7 248 aa2.04□□□□□ -2.08
HERC3-213ENST00000598772 HSPB11Q9Y547 144 aa2.04□□□□□ -2.08
HERC3-213ENST00000598772 TRBV27A0A0K0K1C4 114 aa2.03□□□□□ -2.08
HERC3-213ENST00000598772 TMEM238LA0A1B0GVL6 79 aa2.03□□□□□ -2.08
HERC3-213ENST00000598772 SMKR1H3BMG3 65 aa2.03□□□□□ -2.08
HERC3-213ENST00000598772 MBP02144 154 aa2.03□□□□□ -2.08
HERC3-213ENST00000598772 S100A9P06702 114 aaKnown RBP2.03□□□□□ -2.08
HERC3-213ENST00000598772 Q5VV11 94 aa2.03□□□□□ -2.08
HERC3-213ENST00000598772 Q75L30 129 aa2.03□□□□□ -2.08
HERC3-213ENST00000598772 Q8IZM0 81 aa2.03□□□□□ -2.08
HERC3-213ENST00000598772 Q96NJ1 140 aa2.03□□□□□ -2.08
HERC3-213ENST00000598772 EIF5A2Q9GZV4 153 aaKnown RBP2.03□□□□□ -2.08
HERC3-213ENST00000598772 VCX3BQ9H321 246 aa2.03□□□□□ -2.08
HERC3-213ENST00000598772 TRBV20OR9-2A0A075B6H5 130 aa2.02□□□□□ -2.09
HERC3-213ENST00000598772 H0YIZ8 118 aa2.02□□□□□ -2.09
HERC3-213ENST00000598772 IL15RAQ13261 267 aa2.02□□□□□ -2.09
HERC3-213ENST00000598772 ZC2HC1BQ5TFG8 222 aa2.02□□□□□ -2.09
HERC3-213ENST00000598772 C9orf62Q8N4C0 152 aa2.02□□□□□ -2.09
HERC3-213ENST00000598772 TMEM191AQ9H0A3 160 aa2.02□□□□□ -2.09
HERC3-213ENST00000598772 PAGE4O60829 102 aa2.01□□□□□ -2.09
HERC3-213ENST00000598772 MT1BP07438 61 aa2.01□□□□□ -2.09
HERC3-213ENST00000598772 MT4P47944 62 aa2.01□□□□□ -2.09
HERC3-213ENST00000598772 Q1RN00 199 aa2.01□□□□□ -2.09
HERC3-213ENST00000598772 TMUB2Q71RG4 321 aa2.01□□□□□ -2.09
HERC3-213ENST00000598772 SMIM29Q86T20 159 aa2.01□□□□□ -2.09
HERC3-213ENST00000598772 LINC01561Q8N1V8 128 aa2.01□□□□□ -2.09
HERC3-213ENST00000598772 Q8NDZ9 215 aa2.01□□□□□ -2.09
HERC3-213ENST00000598772 FAM104AQ969W3 186 aa2.01□□□□□ -2.09
HERC3-213ENST00000598772 Q9H521 79 aa2.01□□□□□ -2.09
HERC3-213ENST00000598772 SND1-IT1Q9HBX3 110 aa2.01□□□□□ -2.09
HERC3-213ENST00000598772 SPANXA1Q9NS26 97 aa2.01□□□□□ -2.09
HERC3-213ENST00000598772 NDUFA13Q9P0J0 144 aa2.01□□□□□ -2.09
HERC3-213ENST00000598772 TRAV9-1A0A075B6T8 112 aa2□□□□□ -2.09
HERC3-213ENST00000598772 CTXND1A0A1B0GTU2 59 aa2□□□□□ -2.09
HERC3-213ENST00000598772 A0A1B0GV50 99 aa2□□□□□ -2.09
HERC3-213ENST00000598772 NAP1L6A6NFF2 107 aa2□□□□□ -2.09
HERC3-213ENST00000598772 CENPXA8MT69 81 aa2□□□□□ -2.09
HERC3-213ENST00000598772 CXCL5P42830 114 aa2□□□□□ -2.09
HERC3-213ENST00000598772 MRPS36P82909 103 aaKnown RBP2□□□□□ -2.09
HERC3-213ENST00000598772 ZNF726P1Q15940 193 aa2□□□□□ -2.09
HERC3-213ENST00000598772 MTURNQ8N3F0 131 aa2□□□□□ -2.09
HERC3-213ENST00000598772 ST20-AS1Q8NBB2 130 aa2□□□□□ -2.09
HERC3-213ENST00000598772 COX7B2Q8TF08 81 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms