RNA–Protein interactions for RNA: ENST00000597811.5

XRCC1-206, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 5

Gene XRCC1, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-206ENST00000597811 C2orf82Q6UX34 121 aa9.8□□□□□ -0.84
XRCC1-206ENST00000597811 MRPL35Q9NZE8 188 aaKnown RBP9.8□□□□□ -0.84
XRCC1-206ENST00000597811 PDZD11Q5EBL8 140 aa9.79□□□□□ -0.84
XRCC1-206ENST00000597811 C10orf25Q5T742 122 aa9.79□□□□□ -0.84
XRCC1-206ENST00000597811 H3BRM9 83 aa9.78□□□□□ -0.84
XRCC1-206ENST00000597811 J3QL48 77 aa9.78□□□□□ -0.84
XRCC1-206ENST00000597811 PTTG1IPP53801 180 aa9.78□□□□□ -0.84
XRCC1-206ENST00000597811 RPL37AP61513 92 aaKnown RBP9.78□□□□□ -0.84
XRCC1-206ENST00000597811 KIAA0087Q14695 138 aa9.78□□□□□ -0.84
XRCC1-206ENST00000597811 RNF151Q2KHN1 245 aa9.78□□□□□ -0.84
XRCC1-206ENST00000597811 FAM19A2Q8N3H0 131 aa9.78□□□□□ -0.84
XRCC1-206ENST00000597811 KRTAP29-1A8MX34 341 aaPredicted RBP9.77□□□□□ -0.85
XRCC1-206ENST00000597811 SPINK8P0C7L1 97 aa9.77□□□□□ -0.85
XRCC1-206ENST00000597811 Q8IZM0 81 aa9.77□□□□□ -0.85
XRCC1-206ENST00000597811 C7orf33Q8WU49 177 aa9.77□□□□□ -0.85
XRCC1-206ENST00000597811 C6orf48Q9UBA6 75 aa9.77□□□□□ -0.85
XRCC1-206ENST00000597811 PLAC8Q9NZF1 115 aa9.76□□□□□ -0.85
XRCC1-206ENST00000597811 TRBV30A0A0K0K1B3 111 aa9.75□□□□□ -0.85
XRCC1-206ENST00000597811 SERF1AO75920 110 aa9.75□□□□□ -0.85
XRCC1-206ENST00000597811 GAGE2EQ4V326 116 aa9.75□□□□□ -0.85
XRCC1-206ENST00000597811 IFI27L1Q96BM0 104 aa9.75□□□□□ -0.85
XRCC1-206ENST00000597811 GAGE2DQ9UEU5 116 aa9.75□□□□□ -0.85
XRCC1-206ENST00000597811 SMIM1B2RUZ4 78 aa9.74□□□□□ -0.85
XRCC1-206ENST00000597811 H0Y8G0 127 aa9.74□□□□□ -0.85
XRCC1-206ENST00000597811 IGLC3P0DOY3 106 aa9.74□□□□□ -0.85
XRCC1-206ENST00000597811 TMEM170BQ5T4T1 132 aa9.74□□□□□ -0.85
XRCC1-206ENST00000597811 COX7B2Q8TF08 81 aa9.74□□□□□ -0.85
XRCC1-206ENST00000597811 CHTOPQ9Y3Y2 248 aaKnown RBP9.74□□□□□ -0.85
XRCC1-206ENST00000597811 IGLV5-45A0A087WSX0 123 aa9.73□□□□□ -0.85
XRCC1-206ENST00000597811 HNRNPA3P51991 378 aaKnown RBP9.73□□□□□ -0.85
XRCC1-206ENST00000597811 C9orf116Q5BN46 136 aaPredicted RBP9.73□□□□□ -0.85
XRCC1-206ENST00000597811 LEPROTL1O95214 131 aa9.72□□□□□ -0.85
XRCC1-206ENST00000597811 CXCL5P42830 114 aa9.72□□□□□ -0.85
XRCC1-206ENST00000597811 Q6ZRP5 223 aa9.72□□□□□ -0.85
XRCC1-206ENST00000597811 F8VRH5 84 aa9.71□□□□□ -0.86
XRCC1-206ENST00000597811 FABP4P15090 132 aa9.71□□□□□ -0.86
XRCC1-206ENST00000597811 ZNF22P17026 224 aaPredicted RBP9.71□□□□□ -0.86
XRCC1-206ENST00000597811 C11orf86A6NJI1 115 aa9.7□□□□□ -0.86
XRCC1-206ENST00000597811 NDUFC2-KCTD14E9PQ53 114 aa9.7□□□□□ -0.86
XRCC1-206ENST00000597811 TLX1NBP0CAT3 122 aa9.7□□□□□ -0.86
XRCC1-206ENST00000597811 TRAV12-1A0A0B4J245 112 aa9.69□□□□□ -0.86
XRCC1-206ENST00000597811 A0A1W2PNN7 141 aa9.69□□□□□ -0.86
XRCC1-206ENST00000597811 HSPB8Q9UJY1 196 aa9.69□□□□□ -0.86
XRCC1-206ENST00000597811 NUPR1O60356 82 aa9.68□□□□□ -0.86
XRCC1-206ENST00000597811 FAM19A5Q7Z5A7 132 aaPredicted RBP9.68□□□□□ -0.86
XRCC1-206ENST00000597811 OXTP01178 125 aa9.67□□□□□ -0.86
XRCC1-206ENST00000597811 LINC00310P59036 64 aa9.67□□□□□ -0.86
XRCC1-206ENST00000597811 HMCN2Q8NDA2 5059 aa9.66□□□□□ -0.86
XRCC1-206ENST00000597811 HIST1H2BKO60814 126 aa9.66□□□□□ -0.86
XRCC1-206ENST00000597811 HIST1H2BJP06899 126 aa9.66□□□□□ -0.86
XRCC1-206ENST00000597811 S100A1P23297 94 aa9.66□□□□□ -0.86
XRCC1-206ENST00000597811 HIST1H2BOP23527 126 aa9.66□□□□□ -0.86
XRCC1-206ENST00000597811 HIST1H2BBP33778 126 aa9.66□□□□□ -0.86
XRCC1-206ENST00000597811 HIST1H2BDP58876 126 aa9.66□□□□□ -0.86
XRCC1-206ENST00000597811 HIST1H2BCP62807 126 aa9.66□□□□□ -0.86
XRCC1-206ENST00000597811 HIST2H2BEQ16778 126 aa9.66□□□□□ -0.86
XRCC1-206ENST00000597811 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.66□□□□□ -0.86
XRCC1-206ENST00000597811 HIST1H2BHQ93079 126 aa9.66□□□□□ -0.86
XRCC1-206ENST00000597811 HIST1H2BNQ99877 126 aa9.66□□□□□ -0.86
XRCC1-206ENST00000597811 HIST1H2BMQ99879 126 aa9.66□□□□□ -0.86
XRCC1-206ENST00000597811 FAM168BA1KXE4 195 aa9.65□□□□□ -0.86
XRCC1-206ENST00000597811 PHF5AQ7RTV0 110 aaKnown RBP9.65□□□□□ -0.86
XRCC1-206ENST00000597811 XAGE1AQ9HD64 81 aa9.64□□□□□ -0.87
XRCC1-206ENST00000597811 IGLV5-39A0A0G2JS06 123 aa9.63□□□□□ -0.87
XRCC1-206ENST00000597811 ATP6V1G1O75348 118 aa9.63□□□□□ -0.87
XRCC1-206ENST00000597811 PFN2P35080 140 aa9.63□□□□□ -0.87
XRCC1-206ENST00000597811 MAP1LC3CQ9BXW4 147 aa9.63□□□□□ -0.87
XRCC1-206ENST00000597811 TNXBP22105 4242 aa9.62□□□□□ -0.87
XRCC1-206ENST00000597811 ODF1Q14990 250 aa9.62□□□□□ -0.87
XRCC1-206ENST00000597811 C9orf129Q5T035 196 aaKnown RBP9.62□□□□□ -0.87
XRCC1-206ENST00000597811 ZNF625Q96I27 306 aaPredicted RBP9.62□□□□□ -0.87
XRCC1-206ENST00000597811 TMEM223A0PJW6 202 aa9.61□□□□□ -0.87
XRCC1-206ENST00000597811 M0QXV9 152 aa9.61□□□□□ -0.87
XRCC1-206ENST00000597811 UBE2BP63146 152 aa9.61□□□□□ -0.87
XRCC1-206ENST00000597811 PRR3P79522 188 aaKnown RBP9.61□□□□□ -0.87
XRCC1-206ENST00000597811 PMCHL2Q9BQD1 86 aa9.6□□□□□ -0.87
XRCC1-206ENST00000597811 DPM2O94777 84 aa9.59□□□□□ -0.87
XRCC1-206ENST00000597811 PLNP26678 52 aa9.59□□□□□ -0.87
XRCC1-206ENST00000597811 SFTA2Q6UW10 78 aa9.59□□□□□ -0.87
XRCC1-206ENST00000597811 ERG28Q9UKR5 140 aa9.58□□□□□ -0.88
XRCC1-206ENST00000597811 IGKCP01834 107 aa9.57□□□□□ -0.88
XRCC1-206ENST00000597811 HERVK_113P61574 105 aa9.57□□□□□ -0.88
XRCC1-206ENST00000597811 C1orf137Q5JT78 98 aa9.57□□□□□ -0.88
XRCC1-206ENST00000597811 PSORS1C2Q9UIG4 136 aa9.57□□□□□ -0.88
XRCC1-206ENST00000597811 LINC00158P58513 81 aa9.56□□□□□ -0.88
XRCC1-206ENST00000597811 SERTAD4-AS1Q5TG53 156 aa9.56□□□□□ -0.88
XRCC1-206ENST00000597811 C22orf24Q9Y442 160 aa9.56□□□□□ -0.88
XRCC1-206ENST00000597811 A0A0U1RRA0 63 aa9.55□□□□□ -0.88
XRCC1-206ENST00000597811 MT1HL1P0DM35 61 aa9.55□□□□□ -0.88
XRCC1-206ENST00000597811 LBHQ53QV2 105 aaPredicted RBP9.55□□□□□ -0.88
XRCC1-206ENST00000597811 MEIG1Q5JSS6 88 aa9.55□□□□□ -0.88
XRCC1-206ENST00000597811 SYS1-DBNDD2H3BUS1 97 aa9.54□□□□□ -0.88
XRCC1-206ENST00000597811 COX17Q14061 63 aa9.54□□□□□ -0.88
XRCC1-206ENST00000597811 KRTAP7-1Q8IUC3 87 aa9.54□□□□□ -0.88
XRCC1-206ENST00000597811 NKAPP1Q8N9T2 125 aa9.54□□□□□ -0.88
XRCC1-206ENST00000597811 PLEKHB2Q96CS7 222 aa9.53□□□□□ -0.88
XRCC1-206ENST00000597811 NDUFA12Q9UI09 145 aa9.53□□□□□ -0.88
XRCC1-206ENST00000597811 MYMXA0A1B0GTQ4 84 aa9.52□□□□□ -0.89
XRCC1-206ENST00000597811 LEPROTO15243 131 aa9.52□□□□□ -0.89
XRCC1-206ENST00000597811 KRTDAPP60985 99 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms