RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 TMEM223A0PJW6 202 aa9.22□□□□□ -0.93
VRK3-213ENST00000597215 S100A2P29034 98 aa9.22□□□□□ -0.93
VRK3-213ENST00000597215 C10orf25Q5T742 122 aa9.22□□□□□ -0.93
VRK3-213ENST00000597215 PET117Q6UWS5 81 aa9.22□□□□□ -0.93
VRK3-213ENST00000597215 C2orf82Q6UX34 121 aa9.22□□□□□ -0.93
VRK3-213ENST00000597215 HIST3H2BBQ8N257 126 aa9.22□□□□□ -0.93
VRK3-213ENST00000597215 PMCHL2Q9BQD1 86 aa9.22□□□□□ -0.93
VRK3-213ENST00000597215 FAM30AQ9NZY2 134 aa9.22□□□□□ -0.93
VRK3-213ENST00000597215 TRBV30A0A0K0K1B3 111 aa9.21□□□□□ -0.94
VRK3-213ENST00000597215 LOC107984640A0A0U1RRK4 108 aa9.21□□□□□ -0.94
VRK3-213ENST00000597215 IGKCP01834 107 aa9.21□□□□□ -0.94
VRK3-213ENST00000597215 C3orf79P0CE67 100 aa9.21□□□□□ -0.94
VRK3-213ENST00000597215 KRTDAPP60985 99 aa9.21□□□□□ -0.94
VRK3-213ENST00000597215 C6orf48Q9UBA6 75 aa9.21□□□□□ -0.94
VRK3-213ENST00000597215 APOBP04114 4563 aaKnown RBP9.21□□□□□ -0.94
VRK3-213ENST00000597215 DNAH8Q96JB1 4490 aa9.2□□□□□ -0.94
VRK3-213ENST00000597215 LINC01545Q5VT33 79 aa9.19□□□□□ -0.94
VRK3-213ENST00000597215 LINC00474Q9P2X8 69 aa9.19□□□□□ -0.94
VRK3-213ENST00000597215 IGKV2-24A0A0C4DH68 120 aa9.18□□□□□ -0.94
VRK3-213ENST00000597215 TLX1NBP0CAT3 122 aa9.18□□□□□ -0.94
VRK3-213ENST00000597215 XGP55808 180 aa9.18□□□□□ -0.94
VRK3-213ENST00000597215 SNRPEP62304 92 aaKnown RBP9.18□□□□□ -0.94
VRK3-213ENST00000597215 CIRBPQ14011 172 aaKnown RBP9.18□□□□□ -0.94
VRK3-213ENST00000597215 HIST1H2BLQ99880 126 aa9.18□□□□□ -0.94
VRK3-213ENST00000597215 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.18□□□□□ -0.94
VRK3-213ENST00000597215 A0A096LNI7 61 aa9.17□□□□□ -0.94
VRK3-213ENST00000597215 C20orf202A1L168 122 aa9.17□□□□□ -0.94
VRK3-213ENST00000597215 CHTF8P0CG12 524 aa9.17□□□□□ -0.94
VRK3-213ENST00000597215 HERVK_113P61574 105 aa9.17□□□□□ -0.94
VRK3-213ENST00000597215 HAMPP81172 84 aa9.17□□□□□ -0.94
VRK3-213ENST00000597215 RPL18AQ02543 176 aaKnown RBP9.17□□□□□ -0.94
VRK3-213ENST00000597215 SPACA4Q8TDM5 124 aa9.17□□□□□ -0.94
VRK3-213ENST00000597215 KIAA1109Q2LD37 5005 aa9.16□□□□□ -0.94
VRK3-213ENST00000597215 C5orf52A6NGY3 159 aa9.16□□□□□ -0.94
VRK3-213ENST00000597215 PANO1I0J062 215 aa9.16□□□□□ -0.94
VRK3-213ENST00000597215 PTTG1IPP53801 180 aa9.16□□□□□ -0.94
VRK3-213ENST00000597215 GAGE2BQ13066 116 aa9.16□□□□□ -0.94
VRK3-213ENST00000597215 SFTA2Q6UW10 78 aa9.16□□□□□ -0.94
VRK3-213ENST00000597215 SCXQ7RTU7 201 aa9.16□□□□□ -0.94
VRK3-213ENST00000597215 DPH3Q96FX2 82 aa9.16□□□□□ -0.94
VRK3-213ENST00000597215 HSPG2P98160 4391 aa9.15□□□□□ -0.94
VRK3-213ENST00000597215 NDUFC2-KCTD14E9PQ53 114 aa9.15□□□□□ -0.94
VRK3-213ENST00000597215 MAJINQ3KP22 176 aa9.15□□□□□ -0.94
VRK3-213ENST00000597215 C9orf116Q5BN46 136 aaPredicted RBP9.15□□□□□ -0.94
VRK3-213ENST00000597215 CIRBP-AS1Q8TBR5 109 aa9.15□□□□□ -0.94
VRK3-213ENST00000597215 RYR1P21817 5038 aa9.14□□□□□ -0.95
VRK3-213ENST00000597215 LEPROTO15243 131 aa9.14□□□□□ -0.95
VRK3-213ENST00000597215 AKR1D1P51857 326 aa9.14□□□□□ -0.95
VRK3-213ENST00000597215 Q6ZRP5 223 aa9.14□□□□□ -0.95
VRK3-213ENST00000597215 PLEKHB2Q96CS7 222 aa9.14□□□□□ -0.95
VRK3-213ENST00000597215 ZNF625Q96I27 306 aaPredicted RBP9.13□□□□□ -0.95
VRK3-213ENST00000597215 A0A087WYN8 130 aa9.12□□□□□ -0.95
VRK3-213ENST00000597215 STPG4Q8N801 248 aa9.12□□□□□ -0.95
VRK3-213ENST00000597215 KRTAP17-1Q9BYP8 105 aa9.12□□□□□ -0.95
VRK3-213ENST00000597215 PCLOQ9Y6V0 5065 aa9.12□□□□□ -0.95
VRK3-213ENST00000597215 E9PLD3 99 aa9.11□□□□□ -0.95
VRK3-213ENST00000597215 GAGE2EQ4V326 116 aa9.11□□□□□ -0.95
VRK3-213ENST00000597215 PLAC8Q9NZF1 115 aa9.11□□□□□ -0.95
VRK3-213ENST00000597215 GAGE2DQ9UEU5 116 aa9.11□□□□□ -0.95
VRK3-213ENST00000597215 NDUFA12Q9UI09 145 aa9.11□□□□□ -0.95
VRK3-213ENST00000597215 J3QQQ9 107 aa9.1□□□□□ -0.95
VRK3-213ENST00000597215 LGALS3P17931 250 aaKnown RBP9.1□□□□□ -0.95
VRK3-213ENST00000597215 TSPEAR-AS2P59090 65 aa9.1□□□□□ -0.95
VRK3-213ENST00000597215 HERV-K104P63124 156 aa9.1□□□□□ -0.95
VRK3-213ENST00000597215 ERG28Q9UKR5 140 aa9.1□□□□□ -0.95
VRK3-213ENST00000597215 TMA7Q9Y2S6 64 aaKnown RBP9.1□□□□□ -0.95
VRK3-213ENST00000597215 MYMXA0A1B0GTQ4 84 aa9.09□□□□□ -0.95
VRK3-213ENST00000597215 SMR3BP02814 79 aaPredicted RBP9.08□□□□□ -0.96
VRK3-213ENST00000597215 PFN2P35080 140 aa9.08□□□□□ -0.96
VRK3-213ENST00000597215 NMUP48645 174 aa9.08□□□□□ -0.96
VRK3-213ENST00000597215 COX17Q14061 63 aa9.08□□□□□ -0.96
VRK3-213ENST00000597215 ATOH7Q8N100 152 aa9.07□□□□□ -0.96
VRK3-213ENST00000597215 LINC00587B1AMM8 73 aa9.06□□□□□ -0.96
VRK3-213ENST00000597215 MEIG1Q5JSS6 88 aa9.06□□□□□ -0.96
VRK3-213ENST00000597215 C9orf129Q5T035 196 aaKnown RBP9.06□□□□□ -0.96
VRK3-213ENST00000597215 Q8N1X5 172 aa9.06□□□□□ -0.96
VRK3-213ENST00000597215 XAGE1AQ9HD64 81 aa9.06□□□□□ -0.96
VRK3-213ENST00000597215 A0A1W2PNN7 141 aa9.05□□□□□ -0.96
VRK3-213ENST00000597215 LINC00528Q8N1L1 170 aa9.05□□□□□ -0.96
VRK3-213ENST00000597215 EPM2AB3EWF7 344 aa9.04□□□□□ -0.96
VRK3-213ENST00000597215 FAM229AH3BQW9 127 aa9.04□□□□□ -0.96
VRK3-213ENST00000597215 LINC00158P58513 81 aa9.04□□□□□ -0.96
VRK3-213ENST00000597215 FAM168BA1KXE4 195 aa9.03□□□□□ -0.96
VRK3-213ENST00000597215 SCGB1D1O95968 90 aa9.03□□□□□ -0.96
VRK3-213ENST00000597215 FAM19A5Q7Z5A7 132 aaPredicted RBP9.03□□□□□ -0.96
VRK3-213ENST00000597215 C7orf33Q8WU49 177 aa9.03□□□□□ -0.96
VRK3-213ENST00000597215 IGKV2D-26A0A0A0MRZ7 120 aa9.02□□□□□ -0.97
VRK3-213ENST00000597215 A0A0U1RRA0 63 aa9.02□□□□□ -0.97
VRK3-213ENST00000597215 HSBP1L1C9JCN9 74 aa9.02□□□□□ -0.97
VRK3-213ENST00000597215 SMIM13P0DJ93 91 aa9.02□□□□□ -0.97
VRK3-213ENST00000597215 ANKRD39Q53RE8 183 aa9.02□□□□□ -0.97
VRK3-213ENST00000597215 Q5VSD8 79 aa9.02□□□□□ -0.97
VRK3-213ENST00000597215 SND1-IT1Q9HBX3 110 aa9.02□□□□□ -0.97
VRK3-213ENST00000597215 FAT1Q14517 4588 aa9.01□□□□□ -0.97
VRK3-213ENST00000597215 ZNF815PA8K554 130 aa9□□□□□ -0.97
VRK3-213ENST00000597215 M0QXV9 152 aa9□□□□□ -0.97
VRK3-213ENST00000597215 PLA2G2DQ9UNK4 145 aa9□□□□□ -0.97
VRK3-213ENST00000597215 A0A0J9YXY3 114 aa8.99□□□□□ -0.97
VRK3-213ENST00000597215 PLA2G1BP04054 148 aaKnown RBP8.99□□□□□ -0.97
VRK3-213ENST00000597215 RPL37AP61513 92 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms