RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 A0A0J9YXV3 536 aa11.31□□□□□ -0.6
HOMER3-208ENST00000595756 C7orf33Q8WU49 177 aa11.31□□□□□ -0.6
HOMER3-208ENST00000595756 ORAOV1Q8WV07 137 aa11.31□□□□□ -0.6
HOMER3-208ENST00000595756 IFI27L1Q96BM0 104 aa11.31□□□□□ -0.6
HOMER3-208ENST00000595756 IGLV4-69A0A075B6H9 119 aa11.3□□□□□ -0.6
HOMER3-208ENST00000595756 LEPROTL1O95214 131 aa11.3□□□□□ -0.6
HOMER3-208ENST00000595756 SPAG11BQ08648 103 aa11.3□□□□□ -0.6
HOMER3-208ENST00000595756 SYCNQ0VAF6 134 aa11.3□□□□□ -0.6
HOMER3-208ENST00000595756 FAM19A2Q8N3H0 131 aa11.3□□□□□ -0.6
HOMER3-208ENST00000595756 PACRGQ96M98 296 aaPredicted RBP11.3□□□□□ -0.6
HOMER3-208ENST00000595756 PLA2G2DQ9UNK4 145 aa11.3□□□□□ -0.6
HOMER3-208ENST00000595756 LINC00310P59036 64 aa11.29□□□□□ -0.6
HOMER3-208ENST00000595756 LINC00469Q8N7U9 141 aa11.29□□□□□ -0.6
HOMER3-208ENST00000595756 CAMK2N2Q96S95 79 aa11.29□□□□□ -0.6
HOMER3-208ENST00000595756 HSPB8Q9UJY1 196 aa11.29□□□□□ -0.6
HOMER3-208ENST00000595756 IGLV5-45A0A087WSX0 123 aa11.28□□□□□ -0.6
HOMER3-208ENST00000595756 TRAV12-1A0A0B4J245 112 aa11.28□□□□□ -0.6
HOMER3-208ENST00000595756 H3BRM9 83 aa11.28□□□□□ -0.6
HOMER3-208ENST00000595756 MT1HL1P0DM35 61 aa11.28□□□□□ -0.6
HOMER3-208ENST00000595756 IGLC3P0DOY3 106 aa11.28□□□□□ -0.6
HOMER3-208ENST00000595756 MAJINQ3KP22 176 aa11.28□□□□□ -0.6
HOMER3-208ENST00000595756 CARD19Q96LW7 228 aa11.28□□□□□ -0.6
HOMER3-208ENST00000595756 CDKN2A-AS1Q9UH64 79 aa11.28□□□□□ -0.6
HOMER3-208ENST00000595756 IGKV2-24A0A0C4DH68 120 aa11.27□□□□□ -0.61
HOMER3-208ENST00000595756 NDUFA1O15239 70 aa11.26□□□□□ -0.61
HOMER3-208ENST00000595756 PRSS2P07478 247 aa11.26□□□□□ -0.61
HOMER3-208ENST00000595756 LINC00526Q96FQ7 95 aa11.26□□□□□ -0.61
HOMER3-208ENST00000595756 LINC00474Q9P2X8 69 aa11.26□□□□□ -0.61
HOMER3-208ENST00000595756 A0A096LNI7 61 aa11.25□□□□□ -0.61
HOMER3-208ENST00000595756 NUPR1O60356 82 aa11.25□□□□□ -0.61
HOMER3-208ENST00000595756 RNF151Q2KHN1 245 aa11.25□□□□□ -0.61
HOMER3-208ENST00000595756 STPG4Q8N801 248 aa11.25□□□□□ -0.61
HOMER3-208ENST00000595756 CHTOPQ9Y3Y2 248 aaKnown RBP11.25□□□□□ -0.61
HOMER3-208ENST00000595756 PRR3P79522 188 aaKnown RBP11.24□□□□□ -0.61
HOMER3-208ENST00000595756 COA6Q5JTJ3 125 aaKnown RBP11.24□□□□□ -0.61
HOMER3-208ENST00000595756 Q8IZM0 81 aa11.24□□□□□ -0.61
HOMER3-208ENST00000595756 KIAA0087Q14695 138 aa11.23□□□□□ -0.61
HOMER3-208ENST00000595756 C6orf226Q5I0X4 101 aa11.23□□□□□ -0.61
HOMER3-208ENST00000595756 MRPL35Q9NZE8 188 aaKnown RBP11.23□□□□□ -0.61
HOMER3-208ENST00000595756 F8VRH5 84 aa11.22□□□□□ -0.61
HOMER3-208ENST00000595756 FABP4P15090 132 aa11.22□□□□□ -0.61
HOMER3-208ENST00000595756 TOMM7Q9P0U1 55 aa11.22□□□□□ -0.61
HOMER3-208ENST00000595756 SMIM1B2RUZ4 78 aa11.21□□□□□ -0.61
HOMER3-208ENST00000595756 CXCL5P42830 114 aa11.21□□□□□ -0.61
HOMER3-208ENST00000595756 CKS1BP61024 79 aa11.21□□□□□ -0.61
HOMER3-208ENST00000595756 MAP1LC3CQ9BXW4 147 aa11.21□□□□□ -0.61
HOMER3-208ENST00000595756 TRBV30A0A0K0K1B3 111 aa11.2□□□□□ -0.62
HOMER3-208ENST00000595756 LOC107984640A0A0U1RRK4 108 aa11.2□□□□□ -0.62
HOMER3-208ENST00000595756 ZNF22P17026 224 aaPredicted RBP11.2□□□□□ -0.62
HOMER3-208ENST00000595756 C11orf86A6NJI1 115 aa11.19□□□□□ -0.62
HOMER3-208ENST00000595756 TMEM170BQ5T4T1 132 aa11.19□□□□□ -0.62
HOMER3-208ENST00000595756 SPINK8P0C7L1 97 aa11.18□□□□□ -0.62
HOMER3-208ENST00000595756 COX7B2Q8TF08 81 aa11.18□□□□□ -0.62
HOMER3-208ENST00000595756 H0Y8G0 127 aa11.17□□□□□ -0.62
HOMER3-208ENST00000595756 ODF1Q14990 250 aa11.17□□□□□ -0.62
HOMER3-208ENST00000595756 UNQ6190/PRO20217Q6UXQ8 127 aa11.17□□□□□ -0.62
HOMER3-208ENST00000595756 PLNP26678 52 aa11.16□□□□□ -0.62
HOMER3-208ENST00000595756 PTTG1IPP53801 180 aa11.16□□□□□ -0.62
HOMER3-208ENST00000595756 IGLV5-39A0A0G2JS06 123 aa11.15□□□□□ -0.62
HOMER3-208ENST00000595756 TLX1NBP0CAT3 122 aa11.15□□□□□ -0.62
HOMER3-208ENST00000595756 C10orf25Q5T742 122 aa11.15□□□□□ -0.62
HOMER3-208ENST00000595756 C2orf82Q6UX34 121 aa11.15□□□□□ -0.62
HOMER3-208ENST00000595756 C6orf48Q9UBA6 75 aa11.15□□□□□ -0.62
HOMER3-208ENST00000595756 SFTA2Q6UW10 78 aa11.14□□□□□ -0.63
HOMER3-208ENST00000595756 LINC01600Q96MT4 127 aa11.14□□□□□ -0.63
HOMER3-208ENST00000595756 LRP2P98164 4655 aa11.13□□□□□ -0.63
HOMER3-208ENST00000595756 RPL18AQ02543 176 aaKnown RBP11.13□□□□□ -0.63
HOMER3-208ENST00000595756 TMEM223A0PJW6 202 aa11.12□□□□□ -0.63
HOMER3-208ENST00000595756 SYS1-DBNDD2H3BUS1 97 aa11.12□□□□□ -0.63
HOMER3-208ENST00000595756 DPM2O94777 84 aa11.12□□□□□ -0.63
HOMER3-208ENST00000595756 S100A6P06703 90 aa11.12□□□□□ -0.63
HOMER3-208ENST00000595756 GAGE2BQ13066 116 aa11.12□□□□□ -0.63
HOMER3-208ENST00000595756 SPINK6Q6UWN8 80 aa11.12□□□□□ -0.63
HOMER3-208ENST00000595756 Q6ZRP5 223 aa11.12□□□□□ -0.63
HOMER3-208ENST00000595756 NDUFC2-KCTD14E9PQ53 114 aa11.11□□□□□ -0.63
HOMER3-208ENST00000595756 PET117Q6UWS5 81 aa11.11□□□□□ -0.63
HOMER3-208ENST00000595756 IGKCP01834 107 aa11.1□□□□□ -0.63
HOMER3-208ENST00000595756 HERVK_113P61574 105 aa11.09□□□□□ -0.63
HOMER3-208ENST00000595756 REG3GQ6UW15 175 aa11.09□□□□□ -0.63
HOMER3-208ENST00000595756 S100A2P29034 98 aa11.08□□□□□ -0.64
HOMER3-208ENST00000595756 AKR1D1P51857 326 aa11.07□□□□□ -0.64
HOMER3-208ENST00000595756 SRSF9Q13242 221 aaKnown RBP eCLIP11.07□□□□□ -0.64
HOMER3-208ENST00000595756 C3orf79P0CE67 100 aa11.06□□□□□ -0.64
HOMER3-208ENST00000595756 C9orf116Q5BN46 136 aaPredicted RBP11.06□□□□□ -0.64
HOMER3-208ENST00000595756 LINC01545Q5VT33 79 aa11.06□□□□□ -0.64
HOMER3-208ENST00000595756 PMCHL2Q9BQD1 86 aa11.06□□□□□ -0.64
HOMER3-208ENST00000595756 A0A1W2PNN7 141 aa11.05□□□□□ -0.64
HOMER3-208ENST00000595756 C20orf202A1L168 122 aa11.05□□□□□ -0.64
HOMER3-208ENST00000595756 KRTDAPP60985 99 aa11.05□□□□□ -0.64
HOMER3-208ENST00000595756 GAGE2EQ4V326 116 aa11.05□□□□□ -0.64
HOMER3-208ENST00000595756 GAGE2DQ9UEU5 116 aa11.05□□□□□ -0.64
HOMER3-208ENST00000595756 HIST3H2BBQ8N257 126 aa11.04□□□□□ -0.64
HOMER3-208ENST00000595756 PLEKHB2Q96CS7 222 aa11.04□□□□□ -0.64
HOMER3-208ENST00000595756 KRTAP10-8P60410 259 aa11.03□□□□□ -0.64
HOMER3-208ENST00000595756 COX17Q14061 63 aa11.03□□□□□ -0.64
HOMER3-208ENST00000595756 LEPROTO15243 131 aa11.02□□□□□ -0.65
HOMER3-208ENST00000595756 HERV-K104P63124 156 aa11.02□□□□□ -0.65
HOMER3-208ENST00000595756 ZNF625Q96I27 306 aaPredicted RBP11.02□□□□□ -0.65
HOMER3-208ENST00000595756 LINC00587B1AMM8 73 aa11.01□□□□□ -0.65
HOMER3-208ENST00000595756 PSORS1C2Q9UIG4 136 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms