RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 C10orf25Q5T742 122 aa6.26□□□□□ -1.41
DDX39A-220ENST00000593008 C2orf82Q6UX34 121 aa6.26□□□□□ -1.41
DDX39A-220ENST00000593008 STPG4Q8N801 248 aa6.26□□□□□ -1.41
DDX39A-220ENST00000593008 F8WDY8 70 aa6.25□□□□□ -1.41
DDX39A-220ENST00000593008 HAMPP81172 84 aa6.25□□□□□ -1.41
DDX39A-220ENST00000593008 IGLV5-39A0A0G2JS06 123 aa6.24□□□□□ -1.41
DDX39A-220ENST00000593008 ZNF561-AS1K7EIQ3 104 aa6.24□□□□□ -1.41
DDX39A-220ENST00000593008 ANKRD39Q53RE8 183 aa6.24□□□□□ -1.41
DDX39A-220ENST00000593008 Q6ZRU5 148 aa6.24□□□□□ -1.41
DDX39A-220ENST00000593008 TTTY13Q9BZ97 58 aa6.24□□□□□ -1.41
DDX39A-220ENST00000593008 TP73-AS1Q9UF72 201 aa6.24□□□□□ -1.41
DDX39A-220ENST00000593008 IGKV2D-26A0A0A0MRZ7 120 aa6.23□□□□□ -1.41
DDX39A-220ENST00000593008 H3BRM9 83 aa6.23□□□□□ -1.41
DDX39A-220ENST00000593008 PLNP26678 52 aa6.23□□□□□ -1.41
DDX39A-220ENST00000593008 AKR1D1P51857 326 aa6.23□□□□□ -1.41
DDX39A-220ENST00000593008 XGP55808 180 aa6.23□□□□□ -1.41
DDX39A-220ENST00000593008 C9orf116Q5BN46 136 aaPredicted RBP6.23□□□□□ -1.41
DDX39A-220ENST00000593008 UNQ6190/PRO20217Q6UXQ8 127 aa6.23□□□□□ -1.41
DDX39A-220ENST00000593008 LINC01561Q8N1V8 128 aa6.23□□□□□ -1.41
DDX39A-220ENST00000593008 COX7B2Q8TF08 81 aa6.23□□□□□ -1.41
DDX39A-220ENST00000593008 ABCA13Q86UQ4 5058 aa6.23□□□□□ -1.41
DDX39A-220ENST00000593008 FAT1Q14517 4588 aa6.22□□□□□ -1.41
DDX39A-220ENST00000593008 SCGB1D1O95968 90 aa6.22□□□□□ -1.41
DDX39A-220ENST00000593008 C6orf48Q9UBA6 75 aa6.22□□□□□ -1.41
DDX39A-220ENST00000593008 C20orf202A1L168 122 aa6.21□□□□□ -1.42
DDX39A-220ENST00000593008 PANO1I0J062 215 aa6.21□□□□□ -1.42
DDX39A-220ENST00000593008 PYY3Q5JQD4 70 aa6.21□□□□□ -1.42
DDX39A-220ENST00000593008 Q8N1X5 172 aa6.21□□□□□ -1.42
DDX39A-220ENST00000593008 CARD19Q96LW7 228 aa6.21□□□□□ -1.42
DDX39A-220ENST00000593008 CAMK2N2Q96S95 79 aa6.21□□□□□ -1.42
DDX39A-220ENST00000593008 FAM30AQ9NZY2 134 aa6.21□□□□□ -1.42
DDX39A-220ENST00000593008 LOC105371267A0A1B0GV96 52 aa6.2□□□□□ -1.42
DDX39A-220ENST00000593008 SMR3BP02814 79 aaPredicted RBP6.2□□□□□ -1.42
DDX39A-220ENST00000593008 PRSS2P07478 247 aa6.2□□□□□ -1.42
DDX39A-220ENST00000593008 CHTF8P0CG12 524 aa6.2□□□□□ -1.42
DDX39A-220ENST00000593008 CNBPP62633 177 aaKnown RBP6.2□□□□□ -1.42
DDX39A-220ENST00000593008 SYCNQ0VAF6 134 aa6.2□□□□□ -1.42
DDX39A-220ENST00000593008 Q8IZM0 81 aa6.2□□□□□ -1.42
DDX39A-220ENST00000593008 ZNF625Q96I27 306 aaPredicted RBP6.2□□□□□ -1.42
DDX39A-220ENST00000593008 JOSD1Q15040 202 aaPredicted RBP6.19□□□□□ -1.42
DDX39A-220ENST00000593008 E9PLD3 99 aa6.18□□□□□ -1.42
DDX39A-220ENST00000593008 NDUFA1O15239 70 aa6.18□□□□□ -1.42
DDX39A-220ENST00000593008 LEPROTO15243 131 aa6.18□□□□□ -1.42
DDX39A-220ENST00000593008 C6orf226Q5I0X4 101 aa6.18□□□□□ -1.42
DDX39A-220ENST00000593008 SFTA2Q6UW10 78 aa6.18□□□□□ -1.42
DDX39A-220ENST00000593008 PCP2Q8IVA1 136 aa6.18□□□□□ -1.42
DDX39A-220ENST00000593008 C2orf48Q96LS8 159 aa6.18□□□□□ -1.42
DDX39A-220ENST00000593008 LINC00474Q9P2X8 69 aa6.18□□□□□ -1.42
DDX39A-220ENST00000593008 A0A0U1RRA0 63 aa6.17□□□□□ -1.42
DDX39A-220ENST00000593008 EPM2AB3EWF7 344 aa6.17□□□□□ -1.42
DDX39A-220ENST00000593008 J3QQQ9 107 aa6.17□□□□□ -1.42
DDX39A-220ENST00000593008 NMUP48645 174 aa6.17□□□□□ -1.42
DDX39A-220ENST00000593008 CKS1BP61024 79 aa6.17□□□□□ -1.42
DDX39A-220ENST00000593008 PLEKHB2Q96CS7 222 aa6.17□□□□□ -1.42
DDX39A-220ENST00000593008 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.17□□□□□ -1.42
DDX39A-220ENST00000593008 A0A096LNI7 61 aa6.16□□□□□ -1.42
DDX39A-220ENST00000593008 IGKV2-24A0A0C4DH68 120 aa6.16□□□□□ -1.42
DDX39A-220ENST00000593008 CXCL5P42830 114 aa6.16□□□□□ -1.42
DDX39A-220ENST00000593008 HERVK_113P61574 105 aa6.16□□□□□ -1.42
DDX39A-220ENST00000593008 Q5VSD8 79 aa6.16□□□□□ -1.42
DDX39A-220ENST00000593008 SDIM1Q6ZPB5 146 aa6.16□□□□□ -1.42
DDX39A-220ENST00000593008 C9orf163Q8N9P6 203 aa6.16□□□□□ -1.42
DDX39A-220ENST00000593008 DPH3Q96FX2 82 aa6.16□□□□□ -1.42
DDX39A-220ENST00000593008 NDUFA12Q9UI09 145 aa6.16□□□□□ -1.42
DDX39A-220ENST00000593008 PAM16Q9Y3D7 125 aa6.16□□□□□ -1.42
DDX39A-220ENST00000593008 LINC00587B1AMM8 73 aa6.15□□□□□ -1.42
DDX39A-220ENST00000593008 LGALS3P17931 250 aaKnown RBP6.15□□□□□ -1.42
DDX39A-220ENST00000593008 PFN2P35080 140 aa6.15□□□□□ -1.42
DDX39A-220ENST00000593008 RPL18AQ02543 176 aaKnown RBP6.15□□□□□ -1.42
DDX39A-220ENST00000593008 GAGE2BQ13066 116 aa6.15□□□□□ -1.42
DDX39A-220ENST00000593008 RNF151Q2KHN1 245 aa6.15□□□□□ -1.42
DDX39A-220ENST00000593008 Q6ZRP5 223 aa6.15□□□□□ -1.42
DDX39A-220ENST00000593008 DAND5Q8N907 189 aa6.15□□□□□ -1.42
DDX39A-220ENST00000593008 FAM168BA1KXE4 195 aa6.14□□□□□ -1.43
DDX39A-220ENST00000593008 SMIM13P0DJ93 91 aa6.14□□□□□ -1.43
DDX39A-220ENST00000593008 GAGE2EQ4V326 116 aa6.14□□□□□ -1.43
DDX39A-220ENST00000593008 Q6ZSA8 131 aa6.14□□□□□ -1.43
DDX39A-220ENST00000593008 XAGE1AQ9HD64 81 aa6.14□□□□□ -1.43
DDX39A-220ENST00000593008 GAGE2DQ9UEU5 116 aa6.14□□□□□ -1.43
DDX39A-220ENST00000593008 ERG28Q9UKR5 140 aa6.14□□□□□ -1.43
DDX39A-220ENST00000593008 TRBV30A0A0K0K1B3 111 aa6.13□□□□□ -1.43
DDX39A-220ENST00000593008 ZNF815PA8K554 130 aa6.13□□□□□ -1.43
DDX39A-220ENST00000593008 SPATA45Q537H7 98 aa6.13□□□□□ -1.43
DDX39A-220ENST00000593008 C9orf129Q5T035 196 aaKnown RBP6.13□□□□□ -1.43
DDX39A-220ENST00000593008 SCXQ7RTU7 201 aa6.13□□□□□ -1.43
DDX39A-220ENST00000593008 Q8NDZ9 215 aa6.13□□□□□ -1.43
DDX39A-220ENST00000593008 A0A0J9YXY3 114 aa6.12□□□□□ -1.43
DDX39A-220ENST00000593008 FAM229AH3BQW9 127 aa6.12□□□□□ -1.43
DDX39A-220ENST00000593008 EIF4EBP3O60516 100 aaPredicted RBP6.12□□□□□ -1.43
DDX39A-220ENST00000593008 MEIG1Q5JSS6 88 aa6.12□□□□□ -1.43
DDX39A-220ENST00000593008 ADAMTSL4-AS1Q5T5F5 129 aa6.12□□□□□ -1.43
DDX39A-220ENST00000593008 KRTAP7-1Q8IUC3 87 aa6.12□□□□□ -1.43
DDX39A-220ENST00000593008 VAMP8Q9BV40 100 aa6.12□□□□□ -1.43
DDX39A-220ENST00000593008 SRRM2Q9UQ35 2752 aaKnown RBP6.12□□□□□ -1.43
DDX39A-220ENST00000593008 LOC107984640A0A0U1RRK4 108 aa6.11□□□□□ -1.43
DDX39A-220ENST00000593008 MYMXA0A1B0GTQ4 84 aa6.11□□□□□ -1.43
DDX39A-220ENST00000593008 NDUFC2-KCTD14E9PQ53 114 aa6.11□□□□□ -1.43
DDX39A-220ENST00000593008 PTTG1IPP53801 180 aa6.11□□□□□ -1.43
DDX39A-220ENST00000593008 NPC2P61916 151 aa6.11□□□□□ -1.43
DDX39A-220ENST00000593008 SPACA4Q8TDM5 124 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms