RNA–Protein interactions for RNA: ENST00000592826.1

APBA3-208, Transcript of amyloid beta precursor protein binding family A member 3, human

TSL 2

Gene APBA3, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBA3-208	ENST00000592826	CKS1B	P61024	79 aa		14.24	□□□□□ -0.13
APBA3-208	ENST00000592826	UNQ6190/PRO20217	Q6UXQ8	127 aa		14.24	□□□□□ -0.13
APBA3-208	ENST00000592826	STPG4	Q8N801	248 aa		14.24	□□□□□ -0.13
APBA3-208	ENST00000592826	IGLC3	P0DOY3	106 aa		14.23	□□□□□ -0.13
APBA3-208	ENST00000592826	GAGE2B	Q13066	116 aa		14.23	□□□□□ -0.13
APBA3-208	ENST00000592826	CXCL5	P42830	114 aa		14.22	□□□□□ -0.13
APBA3-208	ENST00000592826	C10orf25	Q5T742	122 aa		14.22	□□□□□ -0.13
APBA3-208	ENST00000592826	TOMM7	Q9P0U1	55 aa		14.22	□□□□□ -0.13
APBA3-208	ENST00000592826	RPL18A	Q02543	176 aa	Known RBP	14.21	□□□□□ -0.13
APBA3-208	ENST00000592826	C6orf48	Q9UBA6	75 aa		14.21	□□□□□ -0.13
APBA3-208	ENST00000592826	SMIM1	B2RUZ4	78 aa		14.2	□□□□□ -0.14
APBA3-208	ENST00000592826	C7orf33	Q8WU49	177 aa		14.2	□□□□□ -0.14
APBA3-208	ENST00000592826	RPL37A	P61513	92 aa	Known RBP	14.19	□□□□□ -0.14
APBA3-208	ENST00000592826	IFI27L1	Q96BM0	104 aa		14.19	□□□□□ -0.14
APBA3-208	ENST00000592826	TRAV12-1	A0A0B4J245	112 aa		14.18	□□□□□ -0.14
APBA3-208	ENST00000592826	C2orf82	Q6UX34	121 aa		14.18	□□□□□ -0.14
APBA3-208	ENST00000592826		F8VRH5	84 aa		14.16	□□□□□ -0.14
APBA3-208	ENST00000592826	SCO1	O75880	301 aa		14.16	□□□□□ -0.14
APBA3-208	ENST00000592826	SERF1A	O75920	110 aa		14.16	□□□□□ -0.14
APBA3-208	ENST00000592826	COX7B2	Q8TF08	81 aa		14.16	□□□□□ -0.14
APBA3-208	ENST00000592826	NDUFC2-KCTD14	E9PQ53	114 aa		14.15	□□□□□ -0.14
APBA3-208	ENST00000592826		J3QL48	77 aa		14.15	□□□□□ -0.14
APBA3-208	ENST00000592826	FAM19A2	Q8N3H0	131 aa		14.15	□□□□□ -0.14
APBA3-208	ENST00000592826	CHTOP	Q9Y3Y2	248 aa	Known RBP	14.15	□□□□□ -0.14
APBA3-208	ENST00000592826	KRTAP10-4	P60372	401 aa	Predicted RBP	14.14	□□□□□ -0.15
APBA3-208	ENST00000592826		Q6ZRP5	223 aa		14.14	□□□□□ -0.15
APBA3-208	ENST00000592826	LEPROTL1	O95214	131 aa		14.13	□□□□□ -0.15
APBA3-208	ENST00000592826	SPINK8	P0C7L1	97 aa		14.13	□□□□□ -0.15
APBA3-208	ENST00000592826	ZNF22	P17026	224 aa	Predicted RBP	14.13	□□□□□ -0.15
APBA3-208	ENST00000592826	HSPB8	Q9UJY1	196 aa		14.12	□□□□□ -0.15
APBA3-208	ENST00000592826	LINC00310	P59036	64 aa		14.11	□□□□□ -0.15
APBA3-208	ENST00000592826	C9orf116	Q5BN46	136 aa	Predicted RBP	14.11	□□□□□ -0.15
APBA3-208	ENST00000592826	IGLV5-39	A0A0G2JS06	123 aa		14.1	□□□□□ -0.15
APBA3-208	ENST00000592826	C11orf86	A6NJI1	115 aa		14.1	□□□□□ -0.15
APBA3-208	ENST00000592826	S100A1	P23297	94 aa		14.1	□□□□□ -0.15
APBA3-208	ENST00000592826	GAGE2E	Q4V326	116 aa		14.1	□□□□□ -0.15
APBA3-208	ENST00000592826	TMEM170B	Q5T4T1	132 aa		14.1	□□□□□ -0.15
APBA3-208	ENST00000592826	GAGE2D	Q9UEU5	116 aa		14.1	□□□□□ -0.15
APBA3-208	ENST00000592826		A0A1W2PNN7	141 aa		14.09	□□□□□ -0.15
APBA3-208	ENST00000592826	SFTA2	Q6UW10	78 aa		14.08	□□□□□ -0.16
APBA3-208	ENST00000592826	HIST1H2BK	O60814	126 aa		14.07	□□□□□ -0.16
APBA3-208	ENST00000592826	HIST1H2BJ	P06899	126 aa		14.07	□□□□□ -0.16
APBA3-208	ENST00000592826	HIST1H2BO	P23527	126 aa		14.07	□□□□□ -0.16
APBA3-208	ENST00000592826	HIST1H2BB	P33778	126 aa		14.07	□□□□□ -0.16
APBA3-208	ENST00000592826	HIST1H2BD	P58876	126 aa		14.07	□□□□□ -0.16
APBA3-208	ENST00000592826	HIST1H2BC	P62807	126 aa		14.07	□□□□□ -0.16
APBA3-208	ENST00000592826	HIST2H2BE	Q16778	126 aa		14.07	□□□□□ -0.16
APBA3-208	ENST00000592826	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	14.07	□□□□□ -0.16
APBA3-208	ENST00000592826	HIST1H2BH	Q93079	126 aa		14.07	□□□□□ -0.16
APBA3-208	ENST00000592826	HIST1H2BN	Q99877	126 aa		14.07	□□□□□ -0.16
APBA3-208	ENST00000592826	HIST1H2BM	Q99879	126 aa		14.07	□□□□□ -0.16
APBA3-208	ENST00000592826	NUPR1	O60356	82 aa		14.05	□□□□□ -0.16
APBA3-208	ENST00000592826	KRTAP29-1	A8MX34	341 aa	Predicted RBP	14.03	□□□□□ -0.16
APBA3-208	ENST00000592826	ODF1	Q14990	250 aa		14.02	□□□□□ -0.17
APBA3-208	ENST00000592826	TMEM223	A0PJW6	202 aa		14.01	□□□□□ -0.17
APBA3-208	ENST00000592826	FABP4	P15090	132 aa		14.01	□□□□□ -0.17
APBA3-208	ENST00000592826	PRR3	P79522	188 aa	Known RBP	14.01	□□□□□ -0.17
APBA3-208	ENST00000592826	C9orf129	Q5T035	196 aa	Known RBP	14.01	□□□□□ -0.17
APBA3-208	ENST00000592826	PLN	P26678	52 aa		14	□□□□□ -0.17
APBA3-208	ENST00000592826	MAP1LC3C	Q9BXW4	147 aa		14	□□□□□ -0.17
APBA3-208	ENST00000592826		H0Y8G0	127 aa		13.99	□□□□□ -0.17
APBA3-208	ENST00000592826	COX17	Q14061	63 aa		13.99	□□□□□ -0.17
APBA3-208	ENST00000592826	FAM168B	A1KXE4	195 aa		13.98	□□□□□ -0.17
APBA3-208	ENST00000592826	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	13.98	□□□□□ -0.17
APBA3-208	ENST00000592826	PHF5A	Q7RTV0	110 aa	Known RBP	13.97	□□□□□ -0.17
APBA3-208	ENST00000592826	COA6	Q5JTJ3	125 aa	Known RBP	13.96	□□□□□ -0.17
APBA3-208	ENST00000592826		M0QXV9	152 aa		13.95	□□□□□ -0.18
APBA3-208	ENST00000592826	ATP6V1G1	O75348	118 aa		13.95	□□□□□ -0.18
APBA3-208	ENST00000592826	XAGE1A	Q9HD64	81 aa		13.95	□□□□□ -0.18
APBA3-208	ENST00000592826	DPM2	O94777	84 aa		13.94	□□□□□ -0.18
APBA3-208	ENST00000592826	OXT	P01178	125 aa		13.94	□□□□□ -0.18
APBA3-208	ENST00000592826	SERTAD4-AS1	Q5TG53	156 aa		13.94	□□□□□ -0.18
APBA3-208	ENST00000592826	ZNF625	Q96I27	306 aa	Predicted RBP	13.94	□□□□□ -0.18
APBA3-208	ENST00000592826	ERG28	Q9UKR5	140 aa		13.94	□□□□□ -0.18
APBA3-208	ENST00000592826	HNRNPA3	P51991	378 aa	Known RBP	13.93	□□□□□ -0.18
APBA3-208	ENST00000592826	KRTAP7-1	Q8IUC3	87 aa		13.93	□□□□□ -0.18
APBA3-208	ENST00000592826	PLA2G2D	Q9UNK4	145 aa		13.93	□□□□□ -0.18
APBA3-208	ENST00000592826	LBH	Q53QV2	105 aa	Predicted RBP	13.92	□□□□□ -0.18
APBA3-208	ENST00000592826	TP73-AS1	Q9UF72	201 aa		13.92	□□□□□ -0.18
APBA3-208	ENST00000592826	IGKC	P01834	107 aa		13.91	□□□□□ -0.18
APBA3-208	ENST00000592826	PFN2	P35080	140 aa		13.91	□□□□□ -0.18
APBA3-208	ENST00000592826	PSORS1C2	Q9UIG4	136 aa		13.91	□□□□□ -0.18
APBA3-208	ENST00000592826	LINC00587	B1AMM8	73 aa		13.9	□□□□□ -0.18
APBA3-208	ENST00000592826	HERVK_113	P61574	105 aa		13.9	□□□□□ -0.18
APBA3-208	ENST00000592826	SPINK6	Q6UWN8	80 aa		13.9	□□□□□ -0.18
APBA3-208	ENST00000592826	SYS1-DBNDD2	H3BUS1	97 aa		13.89	□□□□□ -0.19
APBA3-208	ENST00000592826	HERV-K104	P63124	156 aa		13.89	□□□□□ -0.19
APBA3-208	ENST00000592826	UBE2B	P63146	152 aa		13.89	□□□□□ -0.19
APBA3-208	ENST00000592826	C22orf24	Q9Y442	160 aa		13.89	□□□□□ -0.19
APBA3-208	ENST00000592826	PLEKHB2	Q96CS7	222 aa		13.88	□□□□□ -0.19
APBA3-208	ENST00000592826	LEPROT	O15243	131 aa		13.87	□□□□□ -0.19
APBA3-208	ENST00000592826	C1orf137	Q5JT78	98 aa		13.87	□□□□□ -0.19
APBA3-208	ENST00000592826	MYMX	A0A1B0GTQ4	84 aa		13.86	□□□□□ -0.19
APBA3-208	ENST00000592826	SRSF9	Q13242	221 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
APBA3-208	ENST00000592826	PET117	Q6UWS5	81 aa		13.86	□□□□□ -0.19
APBA3-208	ENST00000592826	MRPL55	Q7Z7F7	128 aa	Known RBP	13.85	□□□□□ -0.19
APBA3-208	ENST00000592826	PMCHL2	Q9BQD1	86 aa		13.85	□□□□□ -0.19
APBA3-208	ENST00000592826	SND1-IT1	Q9HBX3	110 aa		13.85	□□□□□ -0.19
APBA3-208	ENST00000592826	NDUFA12	Q9UI09	145 aa		13.85	□□□□□ -0.19
APBA3-208	ENST00000592826	LRP1	Q07954	4544 aa	Known RBP	13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms