RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 H3BRM9 83 aa6.35□□□□□ -1.39
TPM4-216ENST00000592822 NDUFA1O15239 70 aa6.35□□□□□ -1.39
TPM4-216ENST00000592822 PRSS2P07478 247 aa6.35□□□□□ -1.39
TPM4-216ENST00000592822 CHTF8P0CG12 524 aa6.35□□□□□ -1.39
TPM4-216ENST00000592822 RNF151Q2KHN1 245 aa6.35□□□□□ -1.39
TPM4-216ENST00000592822 C6orf48Q9UBA6 75 aa6.35□□□□□ -1.39
TPM4-216ENST00000592822 A0A096LNI7 61 aa6.34□□□□□ -1.39
TPM4-216ENST00000592822 IGLV5-39A0A0G2JS06 123 aa6.34□□□□□ -1.39
TPM4-216ENST00000592822 CIRBPQ14011 172 aaKnown RBP6.34□□□□□ -1.39
TPM4-216ENST00000592822 C6orf226Q5I0X4 101 aa6.34□□□□□ -1.39
TPM4-216ENST00000592822 TMEM170BQ5T4T1 132 aa6.34□□□□□ -1.39
TPM4-216ENST00000592822 SCXQ7RTU7 201 aa6.34□□□□□ -1.39
TPM4-216ENST00000592822 CIRBP-AS1Q8TBR5 109 aa6.34□□□□□ -1.39
TPM4-216ENST00000592822 COX7B2Q8TF08 81 aa6.34□□□□□ -1.39
TPM4-216ENST00000592822 MAP1LC3CQ9BXW4 147 aa6.34□□□□□ -1.39
TPM4-216ENST00000592822 LOC107984640A0A0U1RRK4 108 aa6.33□□□□□ -1.4
TPM4-216ENST00000592822 CKS1BP61024 79 aa6.33□□□□□ -1.4
TPM4-216ENST00000592822 SPACA4Q8TDM5 124 aa6.33□□□□□ -1.4
TPM4-216ENST00000592822 IGKV2-24A0A0C4DH68 120 aa6.32□□□□□ -1.4
TPM4-216ENST00000592822 TRBV30A0A0K0K1B3 111 aa6.32□□□□□ -1.4
TPM4-216ENST00000592822 TMEM223A0PJW6 202 aa6.32□□□□□ -1.4
TPM4-216ENST00000592822 SYS1-DBNDD2H3BUS1 97 aa6.32□□□□□ -1.4
TPM4-216ENST00000592822 PMCHL2Q9BQD1 86 aa6.32□□□□□ -1.4
TPM4-216ENST00000592822 SMR3BP02814 79 aaPredicted RBP6.31□□□□□ -1.4
TPM4-216ENST00000592822 TLX1NBP0CAT3 122 aa6.31□□□□□ -1.4
TPM4-216ENST00000592822 PTTG1IPP53801 180 aa6.31□□□□□ -1.4
TPM4-216ENST00000592822 C9orf116Q5BN46 136 aaPredicted RBP6.31□□□□□ -1.4
TPM4-216ENST00000592822 PKIGQ9Y2B9 76 aa6.31□□□□□ -1.4
TPM4-216ENST00000592822 FAT1Q14517 4588 aa6.31□□□□□ -1.4
TPM4-216ENST00000592822 A0A087WYN8 130 aa6.3□□□□□ -1.4
TPM4-216ENST00000592822 DPM2O94777 84 aa6.3□□□□□ -1.4
TPM4-216ENST00000592822 C3orf79P0CE67 100 aa6.3□□□□□ -1.4
TPM4-216ENST00000592822 PLNP26678 52 aa6.3□□□□□ -1.4
TPM4-216ENST00000592822 CXCL5P42830 114 aa6.3□□□□□ -1.4
TPM4-216ENST00000592822 RPL18AQ02543 176 aaKnown RBP6.3□□□□□ -1.4
TPM4-216ENST00000592822 GAGE2BQ13066 116 aa6.3□□□□□ -1.4
TPM4-216ENST00000592822 MAJINQ3KP22 176 aa6.3□□□□□ -1.4
TPM4-216ENST00000592822 Q6ZRP5 223 aa6.3□□□□□ -1.4
TPM4-216ENST00000592822 HIST3H2BBQ8N257 126 aa6.3□□□□□ -1.4
TPM4-216ENST00000592822 DPH3Q96FX2 82 aa6.3□□□□□ -1.4
TPM4-216ENST00000592822 LINC00474Q9P2X8 69 aa6.3□□□□□ -1.4
TPM4-216ENST00000592822 IGKCP01834 107 aa6.29□□□□□ -1.4
TPM4-216ENST00000592822 LINC01545Q5VT33 79 aa6.29□□□□□ -1.4
TPM4-216ENST00000592822 PET117Q6UWS5 81 aa6.29□□□□□ -1.4
TPM4-216ENST00000592822 Q8N1X5 172 aa6.29□□□□□ -1.4
TPM4-216ENST00000592822 PLAC8Q9NZF1 115 aa6.29□□□□□ -1.4
TPM4-216ENST00000592822 NDUFC2-KCTD14E9PQ53 114 aa6.28□□□□□ -1.4
TPM4-216ENST00000592822 KRTDAPP60985 99 aa6.28□□□□□ -1.4
TPM4-216ENST00000592822 STPG4Q8N801 248 aa6.28□□□□□ -1.4
TPM4-216ENST00000592822 KRTAP4-5Q9BYR2 181 aa6.28□□□□□ -1.4
TPM4-216ENST00000592822 A0A1W2PNN7 141 aa6.27□□□□□ -1.41
TPM4-216ENST00000592822 EPM2AB3EWF7 344 aa6.27□□□□□ -1.41
TPM4-216ENST00000592822 S100A6P06703 90 aa6.27□□□□□ -1.41
TPM4-216ENST00000592822 GAGE2EQ4V326 116 aa6.27□□□□□ -1.41
TPM4-216ENST00000592822 LINC00528Q8N1L1 170 aa6.27□□□□□ -1.41
TPM4-216ENST00000592822 ZNF625Q96I27 306 aaPredicted RBP6.27□□□□□ -1.41
TPM4-216ENST00000592822 HIST1H2BLQ99880 126 aa6.27□□□□□ -1.41
TPM4-216ENST00000592822 GAGE2DQ9UEU5 116 aa6.27□□□□□ -1.41
TPM4-216ENST00000592822 SNRPEP62304 92 aaKnown RBP6.26□□□□□ -1.41
TPM4-216ENST00000592822 SRRM2Q9UQ35 2752 aaKnown RBP6.25□□□□□ -1.41
TPM4-216ENST00000592822 FAM168BA1KXE4 195 aa6.25□□□□□ -1.41
TPM4-216ENST00000592822 C5orf52A6NGY3 159 aa6.25□□□□□ -1.41
TPM4-216ENST00000592822 FAM229AH3BQW9 127 aa6.25□□□□□ -1.41
TPM4-216ENST00000592822 LEPROTO15243 131 aa6.25□□□□□ -1.41
TPM4-216ENST00000592822 S100A2P29034 98 aa6.25□□□□□ -1.41
TPM4-216ENST00000592822 TSPEAR-AS2P59090 65 aa6.25□□□□□ -1.41
TPM4-216ENST00000592822 C9orf129Q5T035 196 aaKnown RBP6.25□□□□□ -1.41
TPM4-216ENST00000592822 Q5VSD8 79 aa6.25□□□□□ -1.41
TPM4-216ENST00000592822 SFTA2Q6UW10 78 aa6.25□□□□□ -1.41
TPM4-216ENST00000592822 HERVK_113P61574 105 aa6.24□□□□□ -1.41
TPM4-216ENST00000592822 KRTAP7-1Q8IUC3 87 aa6.24□□□□□ -1.41
TPM4-216ENST00000592822 PLEKHB2Q96CS7 222 aa6.24□□□□□ -1.41
TPM4-216ENST00000592822 XAGE1AQ9HD64 81 aa6.24□□□□□ -1.41
TPM4-216ENST00000592822 ERG28Q9UKR5 140 aa6.24□□□□□ -1.41
TPM4-216ENST00000592822 ABCA13Q86UQ4 5058 aa6.24□□□□□ -1.41
TPM4-216ENST00000592822 E9PLD3 99 aa6.23□□□□□ -1.41
TPM4-216ENST00000592822 J3QQQ9 107 aa6.23□□□□□ -1.41
TPM4-216ENST00000592822 PFN2P35080 140 aa6.23□□□□□ -1.41
TPM4-216ENST00000592822 NDUFA12Q9UI09 145 aa6.23□□□□□ -1.41
TPM4-216ENST00000592822 C20orf202A1L168 122 aa6.22□□□□□ -1.41
TPM4-216ENST00000592822 KRTAP10-4P60372 401 aaPredicted RBP6.22□□□□□ -1.41
TPM4-216ENST00000592822 COX17Q14061 63 aa6.22□□□□□ -1.41
TPM4-216ENST00000592822 VPS13BQ7Z7G8 4022 aa6.22□□□□□ -1.41
TPM4-216ENST00000592822 MYMXA0A1B0GTQ4 84 aa6.21□□□□□ -1.42
TPM4-216ENST00000592822 PLA2G1BP04054 148 aaKnown RBP6.21□□□□□ -1.42
TPM4-216ENST00000592822 HERV-K104P63124 156 aa6.21□□□□□ -1.42
TPM4-216ENST00000592822 SERTAD4-AS1Q5TG53 156 aa6.21□□□□□ -1.42
TPM4-216ENST00000592822 FAM19A5Q7Z5A7 132 aaPredicted RBP6.21□□□□□ -1.42
TPM4-216ENST00000592822 ATOH7Q8N100 152 aa6.21□□□□□ -1.42
TPM4-216ENST00000592822 PCLOQ9Y6V0 5065 aa6.21□□□□□ -1.42
TPM4-216ENST00000592822 IGKV2D-26A0A0A0MRZ7 120 aa6.2□□□□□ -1.42
TPM4-216ENST00000592822 SMIM13P0DJ93 91 aa6.2□□□□□ -1.42
TPM4-216ENST00000592822 LGALS3P17931 250 aaKnown RBP6.2□□□□□ -1.42
TPM4-216ENST00000592822 RPL37AP61513 92 aaKnown RBP6.2□□□□□ -1.42
TPM4-216ENST00000592822 PHF5AQ7RTV0 110 aaKnown RBP6.2□□□□□ -1.42
TPM4-216ENST00000592822 C7orf33Q8WU49 177 aa6.2□□□□□ -1.42
TPM4-216ENST00000592822 SND1-IT1Q9HBX3 110 aa6.2□□□□□ -1.42
TPM4-216ENST00000592822 A0A0U1RRA0 63 aa6.19□□□□□ -1.42
TPM4-216ENST00000592822 NMUP48645 174 aa6.19□□□□□ -1.42
TPM4-216ENST00000592822 LINC00158P58513 81 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms