RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 IGLV5-45A0A087WSX0 123 aa11.82□□□□□ -0.52
TCF3-216ENST00000592395 LINC00469Q8N7U9 141 aa11.82□□□□□ -0.52
TCF3-216ENST00000592395 PLAC8Q9NZF1 115 aa11.82□□□□□ -0.52
TCF3-216ENST00000592395 SCO1O75880 301 aa11.81□□□□□ -0.52
TCF3-216ENST00000592395 PRSS2P07478 247 aa11.81□□□□□ -0.52
TCF3-216ENST00000592395 NDUFA6P56556 154 aa11.81□□□□□ -0.52
TCF3-216ENST00000592395 HSBP1O75506 76 aa11.8□□□□□ -0.52
TCF3-216ENST00000592395 PTTG1IPP53801 180 aa11.8□□□□□ -0.52
TCF3-216ENST00000592395 C10orf25Q5T742 122 aa11.8□□□□□ -0.52
TCF3-216ENST00000592395 UNQ6190/PRO20217Q6UXQ8 127 aa11.8□□□□□ -0.52
TCF3-216ENST00000592395 Q8IZM0 81 aa11.8□□□□□ -0.52
TCF3-216ENST00000592395 GAGE2BQ13066 116 aa11.79□□□□□ -0.52
TCF3-216ENST00000592395 STPG4Q8N801 248 aa11.79□□□□□ -0.52
TCF3-216ENST00000592395 TOMM7Q9P0U1 55 aa11.79□□□□□ -0.52
TCF3-216ENST00000592395 C6orf48Q9UBA6 75 aa11.79□□□□□ -0.52
TCF3-216ENST00000592395 TRBV30A0A0K0K1B3 111 aa11.78□□□□□ -0.52
TCF3-216ENST00000592395 SMIM1B2RUZ4 78 aa11.78□□□□□ -0.52
TCF3-216ENST00000592395 IGLC3P0DOY3 106 aa11.78□□□□□ -0.52
TCF3-216ENST00000592395 RPL18AQ02543 176 aaKnown RBP11.78□□□□□ -0.52
TCF3-216ENST00000592395 C2orf82Q6UX34 121 aa11.78□□□□□ -0.52
TCF3-216ENST00000592395 INAFM2P0DMQ5 153 aa11.77□□□□□ -0.53
TCF3-216ENST00000592395 CKS1BP61024 79 aa11.77□□□□□ -0.53
TCF3-216ENST00000592395 C6orf226Q5I0X4 101 aa11.77□□□□□ -0.53
TCF3-216ENST00000592395 H3BRM9 83 aa11.76□□□□□ -0.53
TCF3-216ENST00000592395 TLX1NBP0CAT3 122 aa11.76□□□□□ -0.53
TCF3-216ENST00000592395 IFI27L1Q96BM0 104 aa11.76□□□□□ -0.53
TCF3-216ENST00000592395 VPS13BQ7Z7G8 4022 aa11.76□□□□□ -0.53
TCF3-216ENST00000592395 SERF1AO75920 110 aa11.75□□□□□ -0.53
TCF3-216ENST00000592395 LINC00310P59036 64 aa11.75□□□□□ -0.53
TCF3-216ENST00000592395 FAM19A2Q8N3H0 131 aa11.75□□□□□ -0.53
TCF3-216ENST00000592395 SPINK8P0C7L1 97 aa11.74□□□□□ -0.53
TCF3-216ENST00000592395 CXCL5P42830 114 aa11.74□□□□□ -0.53
TCF3-216ENST00000592395 RPL37AP61513 92 aaKnown RBP11.74□□□□□ -0.53
TCF3-216ENST00000592395 ZNF22P17026 224 aaPredicted RBP11.73□□□□□ -0.53
TCF3-216ENST00000592395 KRTAP10-4P60372 401 aaPredicted RBP11.73□□□□□ -0.53
TCF3-216ENST00000592395 SRRM2Q9UQ35 2752 aaKnown RBP11.73□□□□□ -0.53
TCF3-216ENST00000592395 TRAV12-1A0A0B4J245 112 aa11.72□□□□□ -0.53
TCF3-216ENST00000592395 Q6ZRP5 223 aa11.72□□□□□ -0.53
TCF3-216ENST00000592395 COX7B2Q8TF08 81 aa11.72□□□□□ -0.53
TCF3-216ENST00000592395 C7orf33Q8WU49 177 aa11.72□□□□□ -0.53
TCF3-216ENST00000592395 NDUFC2-KCTD14E9PQ53 114 aa11.71□□□□□ -0.53
TCF3-216ENST00000592395 F8VRH5 84 aa11.71□□□□□ -0.53
TCF3-216ENST00000592395 CHTOPQ9Y3Y2 248 aaKnown RBP11.71□□□□□ -0.53
TCF3-216ENST00000592395 C11orf86A6NJI1 115 aa11.7□□□□□ -0.54
TCF3-216ENST00000592395 LEPROTL1O95214 131 aa11.7□□□□□ -0.54
TCF3-216ENST00000592395 C9orf116Q5BN46 136 aaPredicted RBP11.7□□□□□ -0.54
TCF3-216ENST00000592395 NUPR1O60356 82 aa11.69□□□□□ -0.54
TCF3-216ENST00000592395 IGLV5-39A0A0G2JS06 123 aa11.68□□□□□ -0.54
TCF3-216ENST00000592395 A0A1W2PNN7 141 aa11.68□□□□□ -0.54
TCF3-216ENST00000592395 HIST1H2BKO60814 126 aa11.68□□□□□ -0.54
TCF3-216ENST00000592395 HIST1H2BJP06899 126 aa11.68□□□□□ -0.54
TCF3-216ENST00000592395 HIST1H2BOP23527 126 aa11.68□□□□□ -0.54
TCF3-216ENST00000592395 HIST1H2BBP33778 126 aa11.68□□□□□ -0.54
TCF3-216ENST00000592395 HIST1H2BDP58876 126 aa11.68□□□□□ -0.54
TCF3-216ENST00000592395 HIST1H2BCP62807 126 aa11.68□□□□□ -0.54
TCF3-216ENST00000592395 HIST2H2BEQ16778 126 aa11.68□□□□□ -0.54
TCF3-216ENST00000592395 GAGE2EQ4V326 116 aa11.68□□□□□ -0.54
TCF3-216ENST00000592395 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.68□□□□□ -0.54
TCF3-216ENST00000592395 TMEM170BQ5T4T1 132 aa11.68□□□□□ -0.54
TCF3-216ENST00000592395 HIST1H2BHQ93079 126 aa11.68□□□□□ -0.54
TCF3-216ENST00000592395 HIST1H2BNQ99877 126 aa11.68□□□□□ -0.54
TCF3-216ENST00000592395 HIST1H2BMQ99879 126 aa11.68□□□□□ -0.54
TCF3-216ENST00000592395 GAGE2DQ9UEU5 116 aa11.68□□□□□ -0.54
TCF3-216ENST00000592395 HSPB8Q9UJY1 196 aa11.67□□□□□ -0.54
TCF3-216ENST00000592395 S100A1P23297 94 aa11.66□□□□□ -0.54
TCF3-216ENST00000592395 H0Y8G0 127 aa11.63□□□□□ -0.55
TCF3-216ENST00000592395 FABP4P15090 132 aa11.63□□□□□ -0.55
TCF3-216ENST00000592395 ODF1Q14990 250 aa11.63□□□□□ -0.55
TCF3-216ENST00000592395 FAM168BA1KXE4 195 aa11.62□□□□□ -0.55
TCF3-216ENST00000592395 ATP6V1G1O75348 118 aa11.62□□□□□ -0.55
TCF3-216ENST00000592395 TMEM223A0PJW6 202 aa11.61□□□□□ -0.55
TCF3-216ENST00000592395 C9orf129Q5T035 196 aaKnown RBP11.61□□□□□ -0.55
TCF3-216ENST00000592395 PLA2G2DQ9UNK4 145 aa11.61□□□□□ -0.55
TCF3-216ENST00000592395 PRR3P79522 188 aaKnown RBP11.6□□□□□ -0.55
TCF3-216ENST00000592395 SFTA2Q6UW10 78 aa11.6□□□□□ -0.55
TCF3-216ENST00000592395 FAM19A5Q7Z5A7 132 aaPredicted RBP11.6□□□□□ -0.55
TCF3-216ENST00000592395 FLG2Q5D862 2391 aaPredicted RBP11.6□□□□□ -0.55
TCF3-216ENST00000592395 HNRNPA3P51991 378 aaKnown RBP11.58□□□□□ -0.56
TCF3-216ENST00000592395 PHF5AQ7RTV0 110 aaKnown RBP11.58□□□□□ -0.56
TCF3-216ENST00000592395 KRTAP7-1Q8IUC3 87 aa11.58□□□□□ -0.56
TCF3-216ENST00000592395 MAP1LC3CQ9BXW4 147 aa11.58□□□□□ -0.56
TCF3-216ENST00000592395 XAGE1AQ9HD64 81 aa11.58□□□□□ -0.56
TCF3-216ENST00000592395 PLNP26678 52 aa11.57□□□□□ -0.56
TCF3-216ENST00000592395 M0QXV9 152 aa11.56□□□□□ -0.56
TCF3-216ENST00000592395 COA6Q5JTJ3 125 aaKnown RBP11.56□□□□□ -0.56
TCF3-216ENST00000592395 DPM2O94777 84 aa11.55□□□□□ -0.56
TCF3-216ENST00000592395 ZNF625Q96I27 306 aaPredicted RBP11.55□□□□□ -0.56
TCF3-216ENST00000592395 ERG28Q9UKR5 140 aa11.54□□□□□ -0.56
TCF3-216ENST00000592395 PKHD1L1Q86WI1 4243 aa11.53□□□□□ -0.56
TCF3-216ENST00000592395 PFN2P35080 140 aa11.53□□□□□ -0.56
TCF3-216ENST00000592395 COX17Q14061 63 aa11.53□□□□□ -0.56
TCF3-216ENST00000592395 SERTAD4-AS1Q5TG53 156 aa11.53□□□□□ -0.56
TCF3-216ENST00000592395 PMCHL2Q9BQD1 86 aa11.53□□□□□ -0.56
TCF3-216ENST00000592395 MYCBP2O75592 4640 aa11.52□□□□□ -0.56
TCF3-216ENST00000592395 IGKCP01834 107 aa11.52□□□□□ -0.57
TCF3-216ENST00000592395 PSORS1C2Q9UIG4 136 aa11.52□□□□□ -0.57
TCF3-216ENST00000592395 KRTAP29-1A8MX34 341 aaPredicted RBP11.51□□□□□ -0.57
TCF3-216ENST00000592395 SYS1-DBNDD2H3BUS1 97 aa11.51□□□□□ -0.57
TCF3-216ENST00000592395 C22orf24Q9Y442 160 aa11.5□□□□□ -0.57
TCF3-216ENST00000592395 OXTP01178 125 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms