RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 KRTDAPP60985 99 aa14.45□□□□□ -0.1
R3HDM4-205ENST00000589445 SYS1-DBNDD2H3BUS1 97 aa14.44□□□□□ -0.1
R3HDM4-205ENST00000589445 DPM2O94777 84 aa14.44□□□□□ -0.1
R3HDM4-205ENST00000589445 C10orf25Q5T742 122 aa14.44□□□□□ -0.1
R3HDM4-205ENST00000589445 UNQ6190/PRO20217Q6UXQ8 127 aa14.44□□□□□ -0.1
R3HDM4-205ENST00000589445 F8WDY8 70 aa14.43□□□□□ -0.1
R3HDM4-205ENST00000589445 HIST3H2BBQ8N257 126 aa14.43□□□□□ -0.1
R3HDM4-205ENST00000589445 FAM30AQ9NZY2 134 aa14.43□□□□□ -0.1
R3HDM4-205ENST00000589445 PKIGQ9Y2B9 76 aa14.43□□□□□ -0.1
R3HDM4-205ENST00000589445 IGKV2-24A0A0C4DH68 120 aa14.42□□□□□ -0.1
R3HDM4-205ENST00000589445 DNAH8Q96JB1 4490 aa14.41□□□□□ -0.1
R3HDM4-205ENST00000589445 C3orf79P0CE67 100 aa14.41□□□□□ -0.1
R3HDM4-205ENST00000589445 CHTF8P0CG12 524 aa14.41□□□□□ -0.1
R3HDM4-205ENST00000589445 RPL18AQ02543 176 aaKnown RBP14.41□□□□□ -0.1
R3HDM4-205ENST00000589445 SDIM1Q6ZPB5 146 aa14.41□□□□□ -0.1
R3HDM4-205ENST00000589445 C6orf48Q9UBA6 75 aa14.41□□□□□ -0.1
R3HDM4-205ENST00000589445 IGLV5-39A0A0G2JS06 123 aa14.4□□□□□ -0.1
R3HDM4-205ENST00000589445 LOC107984640A0A0U1RRK4 108 aa14.4□□□□□ -0.1
R3HDM4-205ENST00000589445 TMEM223A0PJW6 202 aa14.4□□□□□ -0.1
R3HDM4-205ENST00000589445 CDK2AP2O75956 126 aa14.4□□□□□ -0.1
R3HDM4-205ENST00000589445 IGKCP01834 107 aa14.4□□□□□ -0.1
R3HDM4-205ENST00000589445 CXCL5P42830 114 aa14.4□□□□□ -0.1
R3HDM4-205ENST00000589445 Q6ZSA8 131 aa14.4□□□□□ -0.1
R3HDM4-205ENST00000589445 PET117Q6UWS5 81 aa14.39□□□□□ -0.11
R3HDM4-205ENST00000589445 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.39□□□□□ -0.11
R3HDM4-205ENST00000589445 A0A096LNI7 61 aa14.38□□□□□ -0.11
R3HDM4-205ENST00000589445 TRBV30A0A0K0K1B3 111 aa14.38□□□□□ -0.11
R3HDM4-205ENST00000589445 SNRPEP62304 92 aaKnown RBP14.38□□□□□ -0.11
R3HDM4-205ENST00000589445 GAGE2BQ13066 116 aa14.37□□□□□ -0.11
R3HDM4-205ENST00000589445 RNF151Q2KHN1 245 aa14.37□□□□□ -0.11
R3HDM4-205ENST00000589445 HIST1H2BLQ99880 126 aa14.37□□□□□ -0.11
R3HDM4-205ENST00000589445 C20orf202A1L168 122 aa14.36□□□□□ -0.11
R3HDM4-205ENST00000589445 PANO1I0J062 215 aa14.36□□□□□ -0.11
R3HDM4-205ENST00000589445 LINC01545Q5VT33 79 aa14.36□□□□□ -0.11
R3HDM4-205ENST00000589445 SCXQ7RTU7 201 aa14.36□□□□□ -0.11
R3HDM4-205ENST00000589445 HERVK_113P61574 105 aa14.35□□□□□ -0.11
R3HDM4-205ENST00000589445 MAJINQ3KP22 176 aa14.35□□□□□ -0.11
R3HDM4-205ENST00000589445 C9orf116Q5BN46 136 aaPredicted RBP14.35□□□□□ -0.11
R3HDM4-205ENST00000589445 DPH3Q96FX2 82 aa14.35□□□□□ -0.11
R3HDM4-205ENST00000589445 TMA7Q9Y2S6 64 aaKnown RBP14.35□□□□□ -0.11
R3HDM4-205ENST00000589445 SPACA4Q8TDM5 124 aa14.34□□□□□ -0.11
R3HDM4-205ENST00000589445 HSPG2P98160 4391 aa14.34□□□□□ -0.11
R3HDM4-205ENST00000589445 XGP55808 180 aa14.33□□□□□ -0.12
R3HDM4-205ENST00000589445 PTTG1IPP53801 180 aa14.32□□□□□ -0.12
R3HDM4-205ENST00000589445 C5orf52A6NGY3 159 aa14.3□□□□□ -0.12
R3HDM4-205ENST00000589445 GAGE2EQ4V326 116 aa14.3□□□□□ -0.12
R3HDM4-205ENST00000589445 CIRBP-AS1Q8TBR5 109 aa14.3□□□□□ -0.12
R3HDM4-205ENST00000589445 LINC00474Q9P2X8 69 aa14.3□□□□□ -0.12
R3HDM4-205ENST00000589445 GAGE2DQ9UEU5 116 aa14.3□□□□□ -0.12
R3HDM4-205ENST00000589445 NDUFC2-KCTD14E9PQ53 114 aa14.29□□□□□ -0.12
R3HDM4-205ENST00000589445 CIRBPQ14011 172 aaKnown RBP14.29□□□□□ -0.12
R3HDM4-205ENST00000589445 Q6ZRP5 223 aa14.29□□□□□ -0.12
R3HDM4-205ENST00000589445 ZNF625Q96I27 306 aaPredicted RBP14.28□□□□□ -0.12
R3HDM4-205ENST00000589445 LEPROTO15243 131 aa14.27□□□□□ -0.13
R3HDM4-205ENST00000589445 TLX1NBP0CAT3 122 aa14.27□□□□□ -0.13
R3HDM4-205ENST00000589445 TSPEAR-AS2P59090 65 aa14.27□□□□□ -0.13
R3HDM4-205ENST00000589445 SFTA2Q6UW10 78 aa14.27□□□□□ -0.13
R3HDM4-205ENST00000589445 STPG4Q8N801 248 aa14.27□□□□□ -0.13
R3HDM4-205ENST00000589445 PLEKHB2Q96CS7 222 aa14.27□□□□□ -0.13
R3HDM4-205ENST00000589445 A0A087WYN8 130 aa14.26□□□□□ -0.13
R3HDM4-205ENST00000589445 ATOH7Q8N100 152 aa14.26□□□□□ -0.13
R3HDM4-205ENST00000589445 SMR3BP02814 79 aaPredicted RBP14.25□□□□□ -0.13
R3HDM4-205ENST00000589445 LGALS3P17931 250 aaKnown RBP14.25□□□□□ -0.13
R3HDM4-205ENST00000589445 PFN2P35080 140 aa14.24□□□□□ -0.13
R3HDM4-205ENST00000589445 NDUFA12Q9UI09 145 aa14.24□□□□□ -0.13
R3HDM4-205ENST00000589445 ERG28Q9UKR5 140 aa14.24□□□□□ -0.13
R3HDM4-205ENST00000589445 HERC1Q15751 4861 aa14.23□□□□□ -0.13
R3HDM4-205ENST00000589445 J3QQQ9 107 aa14.23□□□□□ -0.13
R3HDM4-205ENST00000589445 E9PLD3 99 aa14.21□□□□□ -0.13
R3HDM4-205ENST00000589445 XAGE1AQ9HD64 81 aa14.21□□□□□ -0.13
R3HDM4-205ENST00000589445 PLAC8Q9NZF1 115 aa14.21□□□□□ -0.13
R3HDM4-205ENST00000589445 MYMXA0A1B0GTQ4 84 aa14.2□□□□□ -0.14
R3HDM4-205ENST00000589445 AKR1D1P51857 326 aa14.2□□□□□ -0.14
R3HDM4-205ENST00000589445 MEIG1Q5JSS6 88 aa14.2□□□□□ -0.14
R3HDM4-205ENST00000589445 FAM19A5Q7Z5A7 132 aaPredicted RBP14.2□□□□□ -0.14
R3HDM4-205ENST00000589445 LINC00528Q8N1L1 170 aa14.2□□□□□ -0.14
R3HDM4-205ENST00000589445 A0A0U1RRA0 63 aa14.18□□□□□ -0.14
R3HDM4-205ENST00000589445 FAM168BA1KXE4 195 aa14.18□□□□□ -0.14
R3HDM4-205ENST00000589445 HERV-K104P63124 156 aa14.18□□□□□ -0.14
R3HDM4-205ENST00000589445 SCGB1D1O95968 90 aa14.17□□□□□ -0.14
R3HDM4-205ENST00000589445 C9orf129Q5T035 196 aaKnown RBP14.17□□□□□ -0.14
R3HDM4-205ENST00000589445 NMUP48645 174 aa14.16□□□□□ -0.14
R3HDM4-205ENST00000589445 LINC00158P58513 81 aa14.16□□□□□ -0.14
R3HDM4-205ENST00000589445 A0A1W2PNN7 141 aa14.15□□□□□ -0.14
R3HDM4-205ENST00000589445 Q8N1X5 172 aa14.15□□□□□ -0.14
R3HDM4-205ENST00000589445 IGKV2D-26A0A0A0MRZ7 120 aa14.14□□□□□ -0.15
R3HDM4-205ENST00000589445 SMIM13P0DJ93 91 aa14.14□□□□□ -0.15
R3HDM4-205ENST00000589445 COX17Q14061 63 aa14.14□□□□□ -0.15
R3HDM4-205ENST00000589445 ANKRD39Q53RE8 183 aa14.14□□□□□ -0.15
R3HDM4-205ENST00000589445 Q5VSD8 79 aa14.14□□□□□ -0.15
R3HDM4-205ENST00000589445 FAM229AH3BQW9 127 aa14.13□□□□□ -0.15
R3HDM4-205ENST00000589445 C7orf33Q8WU49 177 aa14.12□□□□□ -0.15
R3HDM4-205ENST00000589445 ZNF815PA8K554 130 aa14.11□□□□□ -0.15
R3HDM4-205ENST00000589445 EPM2AB3EWF7 344 aa14.11□□□□□ -0.15
R3HDM4-205ENST00000589445 HSBP1L1C9JCN9 74 aa14.11□□□□□ -0.15
R3HDM4-205ENST00000589445 M0QXV9 152 aa14.11□□□□□ -0.15
R3HDM4-205ENST00000589445 SND1-IT1Q9HBX3 110 aa14.11□□□□□ -0.15
R3HDM4-205ENST00000589445 TTTY13Q9BZ97 58 aa14.1□□□□□ -0.15
R3HDM4-205ENST00000589445 FAT1Q14517 4588 aa14.1□□□□□ -0.15
R3HDM4-205ENST00000589445 SERTAD4-AS1Q5TG53 156 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms