RNA–Protein interactions for RNA: ENST00000589305.5

RDH13-213, Transcript of retinol dehydrogenase 13, humanhuman

TSL 5

Gene RDH13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-213ENST00000589305 TLX1NBP0CAT3 122 aa12.32□□□□□ -0.44
RDH13-213ENST00000589305 IGLC3P0DOY3 106 aa12.32□□□□□ -0.44
RDH13-213ENST00000589305 SMIM1B2RUZ4 78 aa12.31□□□□□ -0.44
RDH13-213ENST00000589305 H3BRM9 83 aa12.31□□□□□ -0.44
RDH13-213ENST00000589305 RPL18AQ02543 176 aaKnown RBP12.31□□□□□ -0.44
RDH13-213ENST00000589305 C2orf82Q6UX34 121 aa12.31□□□□□ -0.44
RDH13-213ENST00000589305 VPS13BQ7Z7G8 4022 aa12.31□□□□□ -0.44
RDH13-213ENST00000589305 RPL37AP61513 92 aaKnown RBP12.3□□□□□ -0.44
RDH13-213ENST00000589305 IFI27L1Q96BM0 104 aa12.3□□□□□ -0.44
RDH13-213ENST00000589305 SRRM2Q9UQ35 2752 aaKnown RBP12.3□□□□□ -0.44
RDH13-213ENST00000589305 CXCL5P42830 114 aa12.29□□□□□ -0.44
RDH13-213ENST00000589305 FAM19A2Q8N3H0 131 aa12.29□□□□□ -0.44
RDH13-213ENST00000589305 SERF1AO75920 110 aa12.28□□□□□ -0.44
RDH13-213ENST00000589305 C7orf33Q8WU49 177 aa12.28□□□□□ -0.44
RDH13-213ENST00000589305 TRAV12-1A0A0B4J245 112 aa12.27□□□□□ -0.45
RDH13-213ENST00000589305 SPINK8P0C7L1 97 aa12.27□□□□□ -0.45
RDH13-213ENST00000589305 COX7B2Q8TF08 81 aa12.27□□□□□ -0.45
RDH13-213ENST00000589305 F8VRH5 84 aa12.26□□□□□ -0.45
RDH13-213ENST00000589305 KRTAP10-4P60372 401 aaPredicted RBP12.26□□□□□ -0.45
RDH13-213ENST00000589305 Q6ZRP5 223 aa12.26□□□□□ -0.45
RDH13-213ENST00000589305 CHTOPQ9Y3Y2 248 aaKnown RBP12.26□□□□□ -0.45
RDH13-213ENST00000589305 NDUFC2-KCTD14E9PQ53 114 aa12.25□□□□□ -0.45
RDH13-213ENST00000589305 ZNF22P17026 224 aaPredicted RBP12.25□□□□□ -0.45
RDH13-213ENST00000589305 LINC00310P59036 64 aa12.25□□□□□ -0.45
RDH13-213ENST00000589305 LEPROTL1O95214 131 aa12.24□□□□□ -0.45
RDH13-213ENST00000589305 A0A1W2PNN7 141 aa12.23□□□□□ -0.45
RDH13-213ENST00000589305 C11orf86A6NJI1 115 aa12.23□□□□□ -0.45
RDH13-213ENST00000589305 GAGE2EQ4V326 116 aa12.23□□□□□ -0.45
RDH13-213ENST00000589305 C9orf116Q5BN46 136 aaPredicted RBP12.23□□□□□ -0.45
RDH13-213ENST00000589305 GAGE2DQ9UEU5 116 aa12.23□□□□□ -0.45
RDH13-213ENST00000589305 IGLV5-39A0A0G2JS06 123 aa12.22□□□□□ -0.45
RDH13-213ENST00000589305 NUPR1O60356 82 aa12.22□□□□□ -0.45
RDH13-213ENST00000589305 TMEM170BQ5T4T1 132 aa12.22□□□□□ -0.45
RDH13-213ENST00000589305 HSPB8Q9UJY1 196 aa12.22□□□□□ -0.45
RDH13-213ENST00000589305 S100A1P23297 94 aa12.21□□□□□ -0.45
RDH13-213ENST00000589305 HIST1H2BKO60814 126 aa12.2□□□□□ -0.46
RDH13-213ENST00000589305 HIST1H2BJP06899 126 aa12.2□□□□□ -0.46
RDH13-213ENST00000589305 HIST1H2BOP23527 126 aa12.2□□□□□ -0.46
RDH13-213ENST00000589305 HIST1H2BBP33778 126 aa12.2□□□□□ -0.46
RDH13-213ENST00000589305 HIST1H2BDP58876 126 aa12.2□□□□□ -0.46
RDH13-213ENST00000589305 HIST1H2BCP62807 126 aa12.2□□□□□ -0.46
RDH13-213ENST00000589305 HIST2H2BEQ16778 126 aa12.2□□□□□ -0.46
RDH13-213ENST00000589305 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.2□□□□□ -0.46
RDH13-213ENST00000589305 HIST1H2BHQ93079 126 aa12.2□□□□□ -0.46
RDH13-213ENST00000589305 HIST1H2BNQ99877 126 aa12.2□□□□□ -0.46
RDH13-213ENST00000589305 HIST1H2BMQ99879 126 aa12.2□□□□□ -0.46
RDH13-213ENST00000589305 FABP4P15090 132 aa12.17□□□□□ -0.46
RDH13-213ENST00000589305 H0Y8G0 127 aa12.15□□□□□ -0.46
RDH13-213ENST00000589305 ODF1Q14990 250 aa12.15□□□□□ -0.46
RDH13-213ENST00000589305 C9orf129Q5T035 196 aaKnown RBP12.15□□□□□ -0.46
RDH13-213ENST00000589305 SFTA2Q6UW10 78 aa12.15□□□□□ -0.46
RDH13-213ENST00000589305 TMEM223A0PJW6 202 aa12.14□□□□□ -0.47
RDH13-213ENST00000589305 FAM168BA1KXE4 195 aa12.14□□□□□ -0.47
RDH13-213ENST00000589305 PRR3P79522 188 aaKnown RBP12.13□□□□□ -0.47
RDH13-213ENST00000589305 PHF5AQ7RTV0 110 aaKnown RBP12.13□□□□□ -0.47
RDH13-213ENST00000589305 FAM19A5Q7Z5A7 132 aaPredicted RBP12.13□□□□□ -0.47
RDH13-213ENST00000589305 MAP1LC3CQ9BXW4 147 aa12.12□□□□□ -0.47
RDH13-213ENST00000589305 ATP6V1G1O75348 118 aa12.11□□□□□ -0.47
RDH13-213ENST00000589305 PLNP26678 52 aa12.11□□□□□ -0.47
RDH13-213ENST00000589305 HNRNPA3P51991 378 aaKnown RBP12.11□□□□□ -0.47
RDH13-213ENST00000589305 XAGE1AQ9HD64 81 aa12.11□□□□□ -0.47
RDH13-213ENST00000589305 FLG2Q5D862 2391 aaPredicted RBP12.1□□□□□ -0.47
RDH13-213ENST00000589305 COX17Q14061 63 aa12.09□□□□□ -0.47
RDH13-213ENST00000589305 KRTAP7-1Q8IUC3 87 aa12.09□□□□□ -0.47
RDH13-213ENST00000589305 M0QXV9 152 aa12.08□□□□□ -0.48
RDH13-213ENST00000589305 DPM2O94777 84 aa12.08□□□□□ -0.48
RDH13-213ENST00000589305 COA6Q5JTJ3 125 aaKnown RBP12.08□□□□□ -0.48
RDH13-213ENST00000589305 ERG28Q9UKR5 140 aa12.08□□□□□ -0.48
RDH13-213ENST00000589305 KRTAP29-1A8MX34 341 aaPredicted RBP12.07□□□□□ -0.48
RDH13-213ENST00000589305 PFN2P35080 140 aa12.07□□□□□ -0.48
RDH13-213ENST00000589305 ZNF625Q96I27 306 aaPredicted RBP12.07□□□□□ -0.48
RDH13-213ENST00000589305 PSORS1C2Q9UIG4 136 aa12.06□□□□□ -0.48
RDH13-213ENST00000589305 OXTP01178 125 aa12.05□□□□□ -0.48
RDH13-213ENST00000589305 IGKCP01834 107 aa12.05□□□□□ -0.48
RDH13-213ENST00000589305 LBHQ53QV2 105 aaPredicted RBP12.05□□□□□ -0.48
RDH13-213ENST00000589305 SERTAD4-AS1Q5TG53 156 aa12.05□□□□□ -0.48
RDH13-213ENST00000589305 PLA2G2DQ9UNK4 145 aa12.05□□□□□ -0.48
RDH13-213ENST00000589305 C22orf24Q9Y442 160 aa12.05□□□□□ -0.48
RDH13-213ENST00000589305 SYS1-DBNDD2H3BUS1 97 aa12.04□□□□□ -0.48
RDH13-213ENST00000589305 UBE2BP63146 152 aa12.04□□□□□ -0.48
RDH13-213ENST00000589305 PMCHL2Q9BQD1 86 aa12.04□□□□□ -0.48
RDH13-213ENST00000589305 J3QL48 77 aa12.03□□□□□ -0.48
RDH13-213ENST00000589305 HERVK_113P61574 105 aa12.03□□□□□ -0.48
RDH13-213ENST00000589305 TP73-AS1Q9UF72 201 aa12.03□□□□□ -0.48
RDH13-213ENST00000589305 LEPROTO15243 131 aa12.02□□□□□ -0.49
RDH13-213ENST00000589305 HERV-K104P63124 156 aa12.02□□□□□ -0.49
RDH13-213ENST00000589305 C1orf137Q5JT78 98 aa12.02□□□□□ -0.49
RDH13-213ENST00000589305 SPINK6Q6UWN8 80 aa12.02□□□□□ -0.49
RDH13-213ENST00000589305 PLEKHB2Q96CS7 222 aa12.02□□□□□ -0.49
RDH13-213ENST00000589305 MYCBP2O75592 4640 aa12.02□□□□□ -0.49
RDH13-213ENST00000589305 SRSF9Q13242 221 aaKnown RBP eCLIP12.01□□□□□ -0.49
RDH13-213ENST00000589305 MYMXA0A1B0GTQ4 84 aa12□□□□□ -0.49
RDH13-213ENST00000589305 LINC00587B1AMM8 73 aa12□□□□□ -0.49
RDH13-213ENST00000589305 LINC00158P58513 81 aa12□□□□□ -0.49
RDH13-213ENST00000589305 PET117Q6UWS5 81 aa12□□□□□ -0.49
RDH13-213ENST00000589305 SND1-IT1Q9HBX3 110 aa12□□□□□ -0.49
RDH13-213ENST00000589305 NDUFA12Q9UI09 145 aa12□□□□□ -0.49
RDH13-213ENST00000589305 PKHD1L1Q86WI1 4243 aa12□□□□□ -0.49
RDH13-213ENST00000589305 IGLV5-37A0A075B6J1 123 aa11.99□□□□□ -0.49
RDH13-213ENST00000589305 MRPL55Q7Z7F7 128 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms