RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 C2orf48Q96LS8 159 aa10.54□□□□□ -0.72
ATG4D-205ENST00000586477 TMEM223A0PJW6 202 aa10.53□□□□□ -0.72
ATG4D-205ENST00000586477 SPINK8P0C7L1 97 aa10.53□□□□□ -0.72
ATG4D-205ENST00000586477 XGP55808 180 aa10.53□□□□□ -0.72
ATG4D-205ENST00000586477 WFDC2Q14508 124 aa10.53□□□□□ -0.72
ATG4D-205ENST00000586477 PKIGQ9Y2B9 76 aa10.53□□□□□ -0.72
ATG4D-205ENST00000586477 IGLV5-39A0A0G2JS06 123 aa10.52□□□□□ -0.73
ATG4D-205ENST00000586477 SCGB1D1O95968 90 aa10.52□□□□□ -0.73
ATG4D-205ENST00000586477 CKS1BP61024 79 aa10.52□□□□□ -0.73
ATG4D-205ENST00000586477 HIGD2BQ4VC39 106 aa10.52□□□□□ -0.73
ATG4D-205ENST00000586477 C6orf226Q5I0X4 101 aa10.52□□□□□ -0.73
ATG4D-205ENST00000586477 TOMM7Q9P0U1 55 aa10.52□□□□□ -0.73
ATG4D-205ENST00000586477 NDUFA1O15239 70 aa10.51□□□□□ -0.73
ATG4D-205ENST00000586477 CNBPP62633 177 aaKnown RBP10.51□□□□□ -0.73
ATG4D-205ENST00000586477 COX7B2Q8TF08 81 aa10.51□□□□□ -0.73
ATG4D-205ENST00000586477 HSBP1L1C9JCN9 74 aa10.5□□□□□ -0.73
ATG4D-205ENST00000586477 PLEKHB2Q96CS7 222 aa10.5□□□□□ -0.73
ATG4D-205ENST00000586477 CAMK2N2Q96S95 79 aa10.5□□□□□ -0.73
ATG4D-205ENST00000586477 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.48□□□□□ -0.73
ATG4D-205ENST00000586477 IGLV5-52A0A0A0MRZ9 124 aa10.48□□□□□ -0.73
ATG4D-205ENST00000586477 SYCNQ0VAF6 134 aa10.48□□□□□ -0.73
ATG4D-205ENST00000586477 JOSD1Q15040 202 aaPredicted RBP10.48□□□□□ -0.73
ATG4D-205ENST00000586477 CARD19Q96LW7 228 aa10.48□□□□□ -0.73
ATG4D-205ENST00000586477 E9PLD3 99 aa10.47□□□□□ -0.73
ATG4D-205ENST00000586477 LEPROTO15243 131 aa10.47□□□□□ -0.73
ATG4D-205ENST00000586477 KIAA0087Q14695 138 aa10.47□□□□□ -0.73
ATG4D-205ENST00000586477 TRBV30A0A0K0K1B3 111 aa10.46□□□□□ -0.73
ATG4D-205ENST00000586477 EPM2AB3EWF7 344 aa10.46□□□□□ -0.73
ATG4D-205ENST00000586477 LGALS3P17931 250 aaKnown RBP10.46□□□□□ -0.73
ATG4D-205ENST00000586477 GCSHP23434 173 aa10.46□□□□□ -0.73
ATG4D-205ENST00000586477 NMUP48645 174 aa10.46□□□□□ -0.73
ATG4D-205ENST00000586477 RNF151Q2KHN1 245 aa10.46□□□□□ -0.73
ATG4D-205ENST00000586477 J3QQQ9 107 aa10.44□□□□□ -0.74
ATG4D-205ENST00000586477 HERV-K104P63124 156 aa10.44□□□□□ -0.74
ATG4D-205ENST00000586477 ATOH7Q8N100 152 aa10.44□□□□□ -0.74
ATG4D-205ENST00000586477 LINC00526Q96FQ7 95 aa10.44□□□□□ -0.74
ATG4D-205ENST00000586477 MYMXA0A1B0GTQ4 84 aa10.43□□□□□ -0.74
ATG4D-205ENST00000586477 LINC00587B1AMM8 73 aa10.43□□□□□ -0.74
ATG4D-205ENST00000586477 HAMPP81172 84 aa10.43□□□□□ -0.74
ATG4D-205ENST00000586477 STPG4Q8N801 248 aa10.43□□□□□ -0.74
ATG4D-205ENST00000586477 C9orf163Q8N9P6 203 aa10.43□□□□□ -0.74
ATG4D-205ENST00000586477 Q6ZRU5 148 aa10.42□□□□□ -0.74
ATG4D-205ENST00000586477 FAM30AQ9NZY2 134 aa10.42□□□□□ -0.74
ATG4D-205ENST00000586477 SRRM2Q9UQ35 2752 aaKnown RBP10.41□□□□□ -0.74
ATG4D-205ENST00000586477 C2orf82Q6UX34 121 aa10.41□□□□□ -0.74
ATG4D-205ENST00000586477 NDUFA12Q9UI09 145 aa10.41□□□□□ -0.74
ATG4D-205ENST00000586477 SLPIP03973 132 aa10.4□□□□□ -0.74
ATG4D-205ENST00000586477 UNQ6190/PRO20217Q6UXQ8 127 aa10.4□□□□□ -0.74
ATG4D-205ENST00000586477 ZNF625Q96I27 306 aaPredicted RBP10.4□□□□□ -0.74
ATG4D-205ENST00000586477 VAMP8Q9BV40 100 aa10.4□□□□□ -0.74
ATG4D-205ENST00000586477 MYCBP2O75592 4640 aa10.39□□□□□ -0.75
ATG4D-205ENST00000586477 LOC107984640A0A0U1RRK4 108 aa10.39□□□□□ -0.75
ATG4D-205ENST00000586477 COX17Q14061 63 aa10.39□□□□□ -0.75
ATG4D-205ENST00000586477 TLX1NBP0CAT3 122 aa10.38□□□□□ -0.75
ATG4D-205ENST00000586477 INAFM2P0DMQ5 153 aa10.38□□□□□ -0.75
ATG4D-205ENST00000586477 PYY3Q5JQD4 70 aa10.38□□□□□ -0.75
ATG4D-205ENST00000586477 LINC00474Q9P2X8 69 aa10.38□□□□□ -0.75
ATG4D-205ENST00000586477 C6orf48Q9UBA6 75 aa10.38□□□□□ -0.75
ATG4D-205ENST00000586477 S100A12P80511 92 aa10.37□□□□□ -0.75
ATG4D-205ENST00000586477 ANKRD39Q53RE8 183 aa10.37□□□□□ -0.75
ATG4D-205ENST00000586477 C10orf25Q5T742 122 aa10.37□□□□□ -0.75
ATG4D-205ENST00000586477 Q5VSD8 79 aa10.37□□□□□ -0.75
ATG4D-205ENST00000586477 HERC1Q15751 4861 aa10.36□□□□□ -0.75
ATG4D-205ENST00000586477 NDUFC2-KCTD14E9PQ53 114 aa10.36□□□□□ -0.75
ATG4D-205ENST00000586477 SMR3BP02814 79 aaPredicted RBP10.36□□□□□ -0.75
ATG4D-205ENST00000586477 TSPEAR-AS2P59090 65 aa10.36□□□□□ -0.75
ATG4D-205ENST00000586477 CIRBPQ14011 172 aaKnown RBP10.36□□□□□ -0.75
ATG4D-205ENST00000586477 LINC01620Q4KN68 170 aa10.36□□□□□ -0.75
ATG4D-205ENST00000586477 Q6ZSA8 131 aa10.36□□□□□ -0.75
ATG4D-205ENST00000586477 ERG28Q9UKR5 140 aa10.36□□□□□ -0.75
ATG4D-205ENST00000586477 ZNF815PA8K554 130 aa10.35□□□□□ -0.75
ATG4D-205ENST00000586477 SMIM6P0DI80 62 aa10.35□□□□□ -0.75
ATG4D-205ENST00000586477 MEIG1Q5JSS6 88 aa10.35□□□□□ -0.75
ATG4D-205ENST00000586477 IGKV2D-26A0A0A0MRZ7 120 aa10.34□□□□□ -0.75
ATG4D-205ENST00000586477 FAM229AH3BQW9 127 aa10.33□□□□□ -0.76
ATG4D-205ENST00000586477 RPL18AQ02543 176 aaKnown RBP10.33□□□□□ -0.76
ATG4D-205ENST00000586477 MAJINQ3KP22 176 aa10.33□□□□□ -0.76
ATG4D-205ENST00000586477 SDIM1Q6ZPB5 146 aa10.33□□□□□ -0.76
ATG4D-205ENST00000586477 PAM16Q9Y3D7 125 aa10.33□□□□□ -0.76
ATG4D-205ENST00000586477 DMBT1Q9UGM3 2413 aaPredicted RBP10.33□□□□□ -0.76
ATG4D-205ENST00000586477 LOC105371267A0A1B0GV96 52 aa10.32□□□□□ -0.76
ATG4D-205ENST00000586477 SPATA45Q537H7 98 aa10.32□□□□□ -0.76
ATG4D-205ENST00000586477 SCGB1D4Q6XE38 83 aa10.32□□□□□ -0.76
ATG4D-205ENST00000586477 FLG2Q5D862 2391 aaPredicted RBP10.31□□□□□ -0.76
ATG4D-205ENST00000586477 PFN2P35080 140 aa10.31□□□□□ -0.76
ATG4D-205ENST00000586477 LINC00158P58513 81 aa10.31□□□□□ -0.76
ATG4D-205ENST00000586477 PKHD1L1Q86WI1 4243 aa10.31□□□□□ -0.76
ATG4D-205ENST00000586477 A0A0J9YXY3 114 aa10.3□□□□□ -0.76
ATG4D-205ENST00000586477 TIMM17BO60830 172 aa10.3□□□□□ -0.76
ATG4D-205ENST00000586477 PTTG1IPP53801 180 aa10.3□□□□□ -0.76
ATG4D-205ENST00000586477 GAGE2BQ13066 116 aa10.3□□□□□ -0.76
ATG4D-205ENST00000586477 C9orf116Q5BN46 136 aaPredicted RBP10.3□□□□□ -0.76
ATG4D-205ENST00000586477 TMEM238C9JI98 176 aa10.29□□□□□ -0.76
ATG4D-205ENST00000586477 COX8AP10176 69 aa10.29□□□□□ -0.76
ATG4D-205ENST00000586477 DLEU1O43261 78 aa10.28□□□□□ -0.76
ATG4D-205ENST00000586477 Q6ZRP5 223 aa10.28□□□□□ -0.76
ATG4D-205ENST00000586477 PCP2Q8IVA1 136 aa10.28□□□□□ -0.76
ATG4D-205ENST00000586477 COPS9Q8WXC6 57 aa10.28□□□□□ -0.76
ATG4D-205ENST00000586477 A0A096LNI7 61 aa10.27□□□□□ -0.77
ATG4D-205ENST00000586477 IGKV2-24A0A0C4DH68 120 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms