RNA–Protein interactions for RNA: ENST00000585726.5

RETREG3-202, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 522 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-202ENST00000585726 LOC107984640A0A0U1RRK4 108 aa13.68□□□□□ -0.22
RETREG3-202ENST00000585726 CKS1BP61024 79 aa13.68□□□□□ -0.22
RETREG3-202ENST00000585726 GAGE2BQ13066 116 aa13.68□□□□□ -0.22
RETREG3-202ENST00000585726 MAJINQ3KP22 176 aa13.68□□□□□ -0.22
RETREG3-202ENST00000585726 MRPL35Q9NZE8 188 aaKnown RBP13.68□□□□□ -0.22
RETREG3-202ENST00000585726 PKIGQ9Y2B9 76 aa13.68□□□□□ -0.22
RETREG3-202ENST00000585726 TRAV12-1A0A0B4J245 112 aa13.67□□□□□ -0.22
RETREG3-202ENST00000585726 C11orf86A6NJI1 115 aa13.67□□□□□ -0.22
RETREG3-202ENST00000585726 ZNF22P17026 224 aaPredicted RBP13.67□□□□□ -0.22
RETREG3-202ENST00000585726 Q8IZM0 81 aa13.67□□□□□ -0.22
RETREG3-202ENST00000585726 SPACA4Q8TDM5 124 aa13.67□□□□□ -0.22
RETREG3-202ENST00000585726 C6orf48Q9UBA6 75 aa13.67□□□□□ -0.22
RETREG3-202ENST00000585726 HSPB8Q9UJY1 196 aa13.67□□□□□ -0.22
RETREG3-202ENST00000585726 RPL18AQ02543 176 aaKnown RBP13.66□□□□□ -0.22
RETREG3-202ENST00000585726 RNF151Q2KHN1 245 aa13.66□□□□□ -0.22
RETREG3-202ENST00000585726 TMEM170BQ5T4T1 132 aa13.66□□□□□ -0.22
RETREG3-202ENST00000585726 CIRBPQ14011 172 aaKnown RBP13.65□□□□□ -0.22
RETREG3-202ENST00000585726 COX7B2Q8TF08 81 aa13.65□□□□□ -0.22
RETREG3-202ENST00000585726 A0A087WYN8 130 aa13.64□□□□□ -0.23
RETREG3-202ENST00000585726 KRTAP4-5Q9BYR2 181 aa13.64□□□□□ -0.23
RETREG3-202ENST00000585726 EPM2AB3EWF7 344 aa13.63□□□□□ -0.23
RETREG3-202ENST00000585726 F8VRH5 84 aa13.63□□□□□ -0.23
RETREG3-202ENST00000585726 PTTG1IPP53801 180 aa13.63□□□□□ -0.23
RETREG3-202ENST00000585726 Q5VSD8 79 aa13.63□□□□□ -0.23
RETREG3-202ENST00000585726 FAM229AH3BQW9 127 aa13.62□□□□□ -0.23
RETREG3-202ENST00000585726 C9orf116Q5BN46 136 aaPredicted RBP13.62□□□□□ -0.23
RETREG3-202ENST00000585726 LINC00528Q8N1L1 170 aa13.62□□□□□ -0.23
RETREG3-202ENST00000585726 STPG4Q8N801 248 aa13.62□□□□□ -0.23
RETREG3-202ENST00000585726 LINC00474Q9P2X8 69 aa13.62□□□□□ -0.23
RETREG3-202ENST00000585726 TRBV30A0A0K0K1B3 111 aa13.61□□□□□ -0.23
RETREG3-202ENST00000585726 ODF1Q14990 250 aa13.6□□□□□ -0.23
RETREG3-202ENST00000585726 MAP1LC3CQ9BXW4 147 aa13.59□□□□□ -0.23
RETREG3-202ENST00000585726 CXCL5P42830 114 aa13.58□□□□□ -0.24
RETREG3-202ENST00000585726 GAGE2EQ4V326 116 aa13.58□□□□□ -0.24
RETREG3-202ENST00000585726 Q6ZRP5 223 aa13.58□□□□□ -0.24
RETREG3-202ENST00000585726 GAGE2DQ9UEU5 116 aa13.58□□□□□ -0.24
RETREG3-202ENST00000585726 IGLV5-39A0A0G2JS06 123 aa13.57□□□□□ -0.24
RETREG3-202ENST00000585726 COA6Q5JTJ3 125 aaKnown RBP13.57□□□□□ -0.24
RETREG3-202ENST00000585726 PMCHL2Q9BQD1 86 aa13.57□□□□□ -0.24
RETREG3-202ENST00000585726 PLAC8Q9NZF1 115 aa13.57□□□□□ -0.24
RETREG3-202ENST00000585726 TLX1NBP0CAT3 122 aa13.56□□□□□ -0.24
RETREG3-202ENST00000585726 TMEM223A0PJW6 202 aa13.55□□□□□ -0.24
RETREG3-202ENST00000585726 NDUFC2-KCTD14E9PQ53 114 aa13.54□□□□□ -0.24
RETREG3-202ENST00000585726 A0A1W2PNN7 141 aa13.52□□□□□ -0.25
RETREG3-202ENST00000585726 PLA2G1BP04054 148 aaKnown RBP13.52□□□□□ -0.25
RETREG3-202ENST00000585726 FAT1Q14517 4588 aa13.52□□□□□ -0.25
RETREG3-202ENST00000585726 SYS1-DBNDD2H3BUS1 97 aa13.51□□□□□ -0.25
RETREG3-202ENST00000585726 DPM2O94777 84 aa13.51□□□□□ -0.25
RETREG3-202ENST00000585726 PLNP26678 52 aa13.51□□□□□ -0.25
RETREG3-202ENST00000585726 IGKCP01834 107 aa13.5□□□□□ -0.25
RETREG3-202ENST00000585726 FAM168BA1KXE4 195 aa13.49□□□□□ -0.25
RETREG3-202ENST00000585726 RPL37AP61513 92 aaKnown RBP13.49□□□□□ -0.25
RETREG3-202ENST00000585726 ZNF625Q96I27 306 aaPredicted RBP13.49□□□□□ -0.25
RETREG3-202ENST00000585726 C7orf33Q8WU49 177 aa13.48□□□□□ -0.25
RETREG3-202ENST00000585726 KRTDAPP60985 99 aa13.47□□□□□ -0.25
RETREG3-202ENST00000585726 FAM19A5Q7Z5A7 132 aaPredicted RBP13.47□□□□□ -0.25
RETREG3-202ENST00000585726 XAGE1AQ9HD64 81 aa13.47□□□□□ -0.25
RETREG3-202ENST00000585726 C3orf79P0CE67 100 aa13.46□□□□□ -0.25
RETREG3-202ENST00000585726 PFN2P35080 140 aa13.46□□□□□ -0.25
RETREG3-202ENST00000585726 C9orf129Q5T035 196 aaKnown RBP13.46□□□□□ -0.25
RETREG3-202ENST00000585726 ABCA13Q86UQ4 5058 aa13.46□□□□□ -0.26
RETREG3-202ENST00000585726 S100A6P06703 90 aa13.44□□□□□ -0.26
RETREG3-202ENST00000585726 INAFM2P0DMQ5 153 aa13.44□□□□□ -0.26
RETREG3-202ENST00000585726 PET117Q6UWS5 81 aa13.44□□□□□ -0.26
RETREG3-202ENST00000585726 PCLOQ9Y6V0 5065 aa13.43□□□□□ -0.26
RETREG3-202ENST00000585726 HERVK_113P61574 105 aa13.43□□□□□ -0.26
RETREG3-202ENST00000585726 PHF5AQ7RTV0 110 aaKnown RBP13.43□□□□□ -0.26
RETREG3-202ENST00000585726 ERG28Q9UKR5 140 aa13.43□□□□□ -0.26
RETREG3-202ENST00000585726 VPS13BQ7Z7G8 4022 aa13.43□□□□□ -0.26
RETREG3-202ENST00000585726 LINC01545Q5VT33 79 aa13.42□□□□□ -0.26
RETREG3-202ENST00000585726 SFTA2Q6UW10 78 aa13.42□□□□□ -0.26
RETREG3-202ENST00000585726 LEPROTO15243 131 aa13.41□□□□□ -0.26
RETREG3-202ENST00000585726 S100A2P29034 98 aa13.41□□□□□ -0.26
RETREG3-202ENST00000585726 TSPEAR-AS2P59090 65 aa13.4□□□□□ -0.26
RETREG3-202ENST00000585726 KRTAP10-4P60372 401 aaPredicted RBP13.4□□□□□ -0.26
RETREG3-202ENST00000585726 HIST3H2BBQ8N257 126 aa13.4□□□□□ -0.26
RETREG3-202ENST00000585726 A0A0U1RRA0 63 aa13.39□□□□□ -0.27
RETREG3-202ENST00000585726 KRTAP7-1Q8IUC3 87 aa13.39□□□□□ -0.27
RETREG3-202ENST00000585726 PLEKHB2Q96CS7 222 aa13.39□□□□□ -0.27
RETREG3-202ENST00000585726 NDUFA12Q9UI09 145 aa13.39□□□□□ -0.27
RETREG3-202ENST00000585726 SERTAD4-AS1Q5TG53 156 aa13.38□□□□□ -0.27
RETREG3-202ENST00000585726 J3QQQ9 107 aa13.37□□□□□ -0.27
RETREG3-202ENST00000585726 M0QXV9 152 aa13.37□□□□□ -0.27
RETREG3-202ENST00000585726 LINC00158P58513 81 aa13.37□□□□□ -0.27
RETREG3-202ENST00000585726 MYMXA0A1B0GTQ4 84 aa13.36□□□□□ -0.27
RETREG3-202ENST00000585726 C20orf202A1L168 122 aa13.36□□□□□ -0.27
RETREG3-202ENST00000585726 LGALS3P17931 250 aaKnown RBP13.36□□□□□ -0.27
RETREG3-202ENST00000585726 SNRPEP62304 92 aaKnown RBP13.36□□□□□ -0.27
RETREG3-202ENST00000585726 COX17Q14061 63 aa13.36□□□□□ -0.27
RETREG3-202ENST00000585726 MEIG1Q5JSS6 88 aa13.36□□□□□ -0.27
RETREG3-202ENST00000585726 HIST1H2BLQ99880 126 aa13.36□□□□□ -0.27
RETREG3-202ENST00000585726 SMIM13P0DJ93 91 aa13.34□□□□□ -0.27
RETREG3-202ENST00000585726 HERV-K104P63124 156 aa13.34□□□□□ -0.27
RETREG3-202ENST00000585726 SND1-IT1Q9HBX3 110 aa13.34□□□□□ -0.27
RETREG3-202ENST00000585726 E9PLD3 99 aa13.33□□□□□ -0.28
RETREG3-202ENST00000585726 PRR3P79522 188 aaKnown RBP13.33□□□□□ -0.28
RETREG3-202ENST00000585726 C22orf24Q9Y442 160 aa13.33□□□□□ -0.28
RETREG3-202ENST00000585726 SRRM2Q9UQ35 2752 aaKnown RBP13.32□□□□□ -0.28
RETREG3-202ENST00000585726 HNRNPA3P51991 378 aaKnown RBP13.32□□□□□ -0.28
RETREG3-202ENST00000585726 UBE2BP63146 152 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 1382.3 ms