RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 LINC00469Q8N7U9 141 aa10.2□□□□□ -0.78
ERBB2-222ENST00000584908 PRSS2P07478 247 aa10.19□□□□□ -0.78
ERBB2-222ENST00000584908 IGLC3P0DOY3 106 aa10.19□□□□□ -0.78
ERBB2-222ENST00000584908 RPL18AQ02543 176 aaKnown RBP10.19□□□□□ -0.78
ERBB2-222ENST00000584908 C7orf33Q8WU49 177 aa10.19□□□□□ -0.78
ERBB2-222ENST00000584908 PACRGQ96M98 296 aaPredicted RBP10.19□□□□□ -0.78
ERBB2-222ENST00000584908 PKHD1L1Q86WI1 4243 aa10.19□□□□□ -0.78
ERBB2-222ENST00000584908 C6orf226Q5I0X4 101 aa10.18□□□□□ -0.78
ERBB2-222ENST00000584908 Q6ZRP5 223 aa10.18□□□□□ -0.78
ERBB2-222ENST00000584908 TOMM7Q9P0U1 55 aa10.17□□□□□ -0.78
ERBB2-222ENST00000584908 A0A1W2PNN7 141 aa10.16□□□□□ -0.78
ERBB2-222ENST00000584908 NDUFC2-KCTD14E9PQ53 114 aa10.16□□□□□ -0.78
ERBB2-222ENST00000584908 CXCL5P42830 114 aa10.16□□□□□ -0.78
ERBB2-222ENST00000584908 CKS1BP61024 79 aa10.16□□□□□ -0.78
ERBB2-222ENST00000584908 F8VRH5 84 aa10.15□□□□□ -0.78
ERBB2-222ENST00000584908 C9orf116Q5BN46 136 aaPredicted RBP10.15□□□□□ -0.78
ERBB2-222ENST00000584908 H3BRM9 83 aa10.14□□□□□ -0.79
ERBB2-222ENST00000584908 HNRNPA3P51991 378 aaKnown RBP10.14□□□□□ -0.79
ERBB2-222ENST00000584908 NDUFA6P56556 154 aa10.14□□□□□ -0.79
ERBB2-222ENST00000584908 BAGE3Q86Y29 109 aa10.14□□□□□ -0.79
ERBB2-222ENST00000584908 IGLV5-39A0A0G2JS06 123 aa10.13□□□□□ -0.79
ERBB2-222ENST00000584908 HSBP1O75506 76 aa10.13□□□□□ -0.79
ERBB2-222ENST00000584908 ZNF22P17026 224 aaPredicted RBP10.13□□□□□ -0.79
ERBB2-222ENST00000584908 LINC00310P59036 64 aa10.13□□□□□ -0.79
ERBB2-222ENST00000584908 COX7B2Q8TF08 81 aa10.13□□□□□ -0.79
ERBB2-222ENST00000584908 TRAV12-1A0A0B4J245 112 aa10.12□□□□□ -0.79
ERBB2-222ENST00000584908 KRTAP29-1A8MX34 341 aaPredicted RBP10.12□□□□□ -0.79
ERBB2-222ENST00000584908 SPINK8P0C7L1 97 aa10.12□□□□□ -0.79
ERBB2-222ENST00000584908 PRR3P79522 188 aaKnown RBP10.12□□□□□ -0.79
ERBB2-222ENST00000584908 IFI27L1Q96BM0 104 aa10.12□□□□□ -0.79
ERBB2-222ENST00000584908 LRP1Q07954 4544 aaKnown RBP10.12□□□□□ -0.79
ERBB2-222ENST00000584908 C11orf86A6NJI1 115 aa10.1□□□□□ -0.79
ERBB2-222ENST00000584908 SERF1AO75920 110 aa10.1□□□□□ -0.79
ERBB2-222ENST00000584908 GAGE2EQ4V326 116 aa10.1□□□□□ -0.79
ERBB2-222ENST00000584908 FAM19A2Q8N3H0 131 aa10.1□□□□□ -0.79
ERBB2-222ENST00000584908 GAGE2DQ9UEU5 116 aa10.1□□□□□ -0.79
ERBB2-222ENST00000584908 FAT3Q8TDW7 4589 aa10.1□□□□□ -0.79
ERBB2-222ENST00000584908 SCO1O75880 301 aa10.09□□□□□ -0.79
ERBB2-222ENST00000584908 C9orf129Q5T035 196 aaKnown RBP10.09□□□□□ -0.79
ERBB2-222ENST00000584908 HERC1Q15751 4861 aa10.09□□□□□ -0.79
ERBB2-222ENST00000584908 FAM168BA1KXE4 195 aa10.08□□□□□ -0.8
ERBB2-222ENST00000584908 OXTP01178 125 aa10.08□□□□□ -0.8
ERBB2-222ENST00000584908 ODF1Q14990 250 aa10.08□□□□□ -0.8
ERBB2-222ENST00000584908 KRTAP7-1Q8IUC3 87 aa10.08□□□□□ -0.8
ERBB2-222ENST00000584908 CHTOPQ9Y3Y2 248 aaKnown RBP10.08□□□□□ -0.8
ERBB2-222ENST00000584908 NUPR1O60356 82 aa10.07□□□□□ -0.8
ERBB2-222ENST00000584908 PHF5AQ7RTV0 110 aaKnown RBP10.07□□□□□ -0.8
ERBB2-222ENST00000584908 LEPROTL1O95214 131 aa10.06□□□□□ -0.8
ERBB2-222ENST00000584908 TMEM170BQ5T4T1 132 aa10.06□□□□□ -0.8
ERBB2-222ENST00000584908 FAM19A5Q7Z5A7 132 aaPredicted RBP10.05□□□□□ -0.8
ERBB2-222ENST00000584908 HIST1H2BKO60814 126 aa10.04□□□□□ -0.8
ERBB2-222ENST00000584908 HIST1H2BJP06899 126 aa10.04□□□□□ -0.8
ERBB2-222ENST00000584908 HIST1H2BOP23527 126 aa10.04□□□□□ -0.8
ERBB2-222ENST00000584908 HIST1H2BBP33778 126 aa10.04□□□□□ -0.8
ERBB2-222ENST00000584908 HIST1H2BDP58876 126 aa10.04□□□□□ -0.8
ERBB2-222ENST00000584908 HIST1H2BCP62807 126 aa10.04□□□□□ -0.8
ERBB2-222ENST00000584908 HIST2H2BEQ16778 126 aa10.04□□□□□ -0.8
ERBB2-222ENST00000584908 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.04□□□□□ -0.8
ERBB2-222ENST00000584908 HIST1H2BHQ93079 126 aa10.04□□□□□ -0.8
ERBB2-222ENST00000584908 HIST1H2BNQ99877 126 aa10.04□□□□□ -0.8
ERBB2-222ENST00000584908 HIST1H2BMQ99879 126 aa10.04□□□□□ -0.8
ERBB2-222ENST00000584908 PSORS1C2Q9UIG4 136 aa10.04□□□□□ -0.8
ERBB2-222ENST00000584908 TMEM223A0PJW6 202 aa10.03□□□□□ -0.8
ERBB2-222ENST00000584908 SRSF9Q13242 221 aaKnown RBP eCLIP10.03□□□□□ -0.8
ERBB2-222ENST00000584908 SFTA2Q6UW10 78 aa10.03□□□□□ -0.8
ERBB2-222ENST00000584908 XAGE1AQ9HD64 81 aa10.03□□□□□ -0.8
ERBB2-222ENST00000584908 J3QL48 77 aa10.02□□□□□ -0.81
ERBB2-222ENST00000584908 M0QXV9 152 aa10.02□□□□□ -0.81
ERBB2-222ENST00000584908 HSPB8Q9UJY1 196 aa10.02□□□□□ -0.81
ERBB2-222ENST00000584908 SERTAD4-AS1Q5TG53 156 aa10.01□□□□□ -0.81
ERBB2-222ENST00000584908 SPINK6Q6UWN8 80 aa10.01□□□□□ -0.81
ERBB2-222ENST00000584908 ZNF625Q96I27 306 aaPredicted RBP10.01□□□□□ -0.81
ERBB2-222ENST00000584908 COX17Q14061 63 aa10□□□□□ -0.81
ERBB2-222ENST00000584908 KRTAP11-1Q8IUC1 163 aa10□□□□□ -0.81
ERBB2-222ENST00000584908 TP73-AS1Q9UF72 201 aa10□□□□□ -0.81
ERBB2-222ENST00000584908 PLA2G2DQ9UNK4 145 aa10□□□□□ -0.81
ERBB2-222ENST00000584908 FABP4P15090 132 aa9.98□□□□□ -0.81
ERBB2-222ENST00000584908 ERG28Q9UKR5 140 aa9.98□□□□□ -0.81
ERBB2-222ENST00000584908 C22orf24Q9Y442 160 aa9.98□□□□□ -0.81
ERBB2-222ENST00000584908 PLNP26678 52 aa9.97□□□□□ -0.81
ERBB2-222ENST00000584908 C1orf137Q5JT78 98 aa9.97□□□□□ -0.81
ERBB2-222ENST00000584908 IGLV5-37A0A075B6J1 123 aa9.96□□□□□ -0.82
ERBB2-222ENST00000584908 H0Y8G0 127 aa9.96□□□□□ -0.82
ERBB2-222ENST00000584908 PFN2P35080 140 aa9.95□□□□□ -0.82
ERBB2-222ENST00000584908 UBE2BP63146 152 aa9.95□□□□□ -0.82
ERBB2-222ENST00000584908 LBHQ53QV2 105 aaPredicted RBP9.95□□□□□ -0.82
ERBB2-222ENST00000584908 COA6Q5JTJ3 125 aaKnown RBP9.95□□□□□ -0.82
ERBB2-222ENST00000584908 DPM2O94777 84 aa9.94□□□□□ -0.82
ERBB2-222ENST00000584908 IGLV7-43P04211 117 aa9.94□□□□□ -0.82
ERBB2-222ENST00000584908 MT1HL1P0DM35 61 aa9.94□□□□□ -0.82
ERBB2-222ENST00000584908 S100A1P23297 94 aa9.94□□□□□ -0.82
ERBB2-222ENST00000584908 MRPL55Q7Z7F7 128 aaKnown RBP9.94□□□□□ -0.82
ERBB2-222ENST00000584908 MAP1LC3CQ9BXW4 147 aa9.94□□□□□ -0.82
ERBB2-222ENST00000584908 LINC01600Q96MT4 127 aa9.93□□□□□ -0.82
ERBB2-222ENST00000584908 SND1-IT1Q9HBX3 110 aa9.93□□□□□ -0.82
ERBB2-222ENST00000584908 REG3GQ6UW15 175 aa9.92□□□□□ -0.82
ERBB2-222ENST00000584908 IGKCP01834 107 aa9.91□□□□□ -0.82
ERBB2-222ENST00000584908 HERV-K104P63124 156 aa9.91□□□□□ -0.82
ERBB2-222ENST00000584908 LEPROTO15243 131 aa9.9□□□□□ -0.82
ERBB2-222ENST00000584908 LINC00167Q96N53 147 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms