RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 LGALS3P17931 250 aaKnown RBP11.93□□□□□ -0.5
RFFL-211ENST00000584541 J3QQQ9 107 aa11.92□□□□□ -0.5
RFFL-211ENST00000584541 CDPF1Q6NVV7 123 aa11.92□□□□□ -0.5
RFFL-211ENST00000584541 C2orf82Q6UX34 121 aa11.92□□□□□ -0.5
RFFL-211ENST00000584541 Q6ZRU5 148 aa11.92□□□□□ -0.5
RFFL-211ENST00000584541 SLPIP03973 132 aa11.91□□□□□ -0.5
RFFL-211ENST00000584541 PYY3Q5JQD4 70 aa11.91□□□□□ -0.5
RFFL-211ENST00000584541 UNQ6190/PRO20217Q6UXQ8 127 aa11.91□□□□□ -0.5
RFFL-211ENST00000584541 TRBV30A0A0K0K1B3 111 aa11.9□□□□□ -0.5
RFFL-211ENST00000584541 MYMXA0A1B0GTQ4 84 aa11.89□□□□□ -0.51
RFFL-211ENST00000584541 LOC105371267A0A1B0GV96 52 aa11.89□□□□□ -0.51
RFFL-211ENST00000584541 A0A1B0GVY2 172 aa11.89□□□□□ -0.51
RFFL-211ENST00000584541 NMUP48645 174 aa11.89□□□□□ -0.51
RFFL-211ENST00000584541 KRTAP10-2P60368 255 aa11.89□□□□□ -0.51
RFFL-211ENST00000584541 RNF151Q2KHN1 245 aa11.89□□□□□ -0.51
RFFL-211ENST00000584541 MAJINQ3KP22 176 aa11.89□□□□□ -0.51
RFFL-211ENST00000584541 ANKRD39Q53RE8 183 aa11.89□□□□□ -0.51
RFFL-211ENST00000584541 VAMP8Q9BV40 100 aa11.89□□□□□ -0.51
RFFL-211ENST00000584541 NDUFA12Q9UI09 145 aa11.89□□□□□ -0.51
RFFL-211ENST00000584541 PKIGQ9Y2B9 76 aa11.89□□□□□ -0.51
RFFL-211ENST00000584541 TSPEAR-AS2P59090 65 aa11.88□□□□□ -0.51
RFFL-211ENST00000584541 C10orf25Q5T742 122 aa11.88□□□□□ -0.51
RFFL-211ENST00000584541 C9orf163Q8N9P6 203 aa11.88□□□□□ -0.51
RFFL-211ENST00000584541 IGKV2D-26A0A0A0MRZ7 120 aa11.87□□□□□ -0.51
RFFL-211ENST00000584541 FUSP35637 526 aaKnown RBP eCLIP11.87□□□□□ -0.51
RFFL-211ENST00000584541 HERV-K104P63124 156 aa11.87□□□□□ -0.51
RFFL-211ENST00000584541 C6orf48Q9UBA6 75 aa11.87□□□□□ -0.51
RFFL-211ENST00000584541 ZNF625Q96I27 306 aaPredicted RBP11.86□□□□□ -0.51
RFFL-211ENST00000584541 PAM16Q9Y3D7 125 aa11.85□□□□□ -0.51
RFFL-211ENST00000584541 GCSHP23434 173 aa11.84□□□□□ -0.51
RFFL-211ENST00000584541 FAT2Q9NYQ8 4349 aa11.84□□□□□ -0.51
RFFL-211ENST00000584541 LOC107984640A0A0U1RRK4 108 aa11.83□□□□□ -0.52
RFFL-211ENST00000584541 ZNF815PA8K554 130 aa11.83□□□□□ -0.52
RFFL-211ENST00000584541 LINC00587B1AMM8 73 aa11.83□□□□□ -0.52
RFFL-211ENST00000584541 S100A12P80511 92 aa11.83□□□□□ -0.52
RFFL-211ENST00000584541 SPATA45Q537H7 98 aa11.83□□□□□ -0.52
RFFL-211ENST00000584541 SMIM6P0DI80 62 aa11.82□□□□□ -0.52
RFFL-211ENST00000584541 LINC01620Q4KN68 170 aa11.82□□□□□ -0.52
RFFL-211ENST00000584541 C9orf116Q5BN46 136 aaPredicted RBP11.82□□□□□ -0.52
RFFL-211ENST00000584541 MEIG1Q5JSS6 88 aa11.82□□□□□ -0.52
RFFL-211ENST00000584541 ERG28Q9UKR5 140 aa11.82□□□□□ -0.52
RFFL-211ENST00000584541 C16orf90A8MZG2 172 aa11.81□□□□□ -0.52
RFFL-211ENST00000584541 COX17Q14061 63 aa11.81□□□□□ -0.52
RFFL-211ENST00000584541 NDUFC2-KCTD14E9PQ53 114 aa11.8□□□□□ -0.52
RFFL-211ENST00000584541 TLX1NBP0CAT3 122 aa11.8□□□□□ -0.52
RFFL-211ENST00000584541 PFN2P35080 140 aa11.8□□□□□ -0.52
RFFL-211ENST00000584541 RPL18AQ02543 176 aaKnown RBP11.8□□□□□ -0.52
RFFL-211ENST00000584541 CIRBPQ14011 172 aaKnown RBP11.79□□□□□ -0.52
RFFL-211ENST00000584541 PCP2Q8IVA1 136 aa11.79□□□□□ -0.52
RFFL-211ENST00000584541 TTTY13Q9BZ97 58 aa11.79□□□□□ -0.52
RFFL-211ENST00000584541 LINC00158P58513 81 aa11.78□□□□□ -0.52
RFFL-211ENST00000584541 SDIM1Q6ZPB5 146 aa11.78□□□□□ -0.52
RFFL-211ENST00000584541 A0A0J9YXY3 114 aa11.77□□□□□ -0.53
RFFL-211ENST00000584541 GAGE2BQ13066 116 aa11.77□□□□□ -0.53
RFFL-211ENST00000584541 SCGB1D4Q6XE38 83 aa11.77□□□□□ -0.53
RFFL-211ENST00000584541 PKD1P98161 4303 aa11.76□□□□□ -0.53
RFFL-211ENST00000584541 SMIM13P0DJ93 91 aa11.76□□□□□ -0.53
RFFL-211ENST00000584541 COX8AP10176 69 aa11.76□□□□□ -0.53
RFFL-211ENST00000584541 A0A0U1RRA0 63 aa11.75□□□□□ -0.53
RFFL-211ENST00000584541 GAGE2EQ4V326 116 aa11.75□□□□□ -0.53
RFFL-211ENST00000584541 Q6ZRP5 223 aa11.75□□□□□ -0.53
RFFL-211ENST00000584541 LINC00474Q9P2X8 69 aa11.75□□□□□ -0.53
RFFL-211ENST00000584541 GAGE2DQ9UEU5 116 aa11.75□□□□□ -0.53
RFFL-211ENST00000584541 A0A096LNI7 61 aa11.74□□□□□ -0.53
RFFL-211ENST00000584541 IGKV2-24A0A0C4DH68 120 aa11.74□□□□□ -0.53
RFFL-211ENST00000584541 PTTG1IPP53801 180 aa11.74□□□□□ -0.53
RFFL-211ENST00000584541 KRTAP10-1P60331 282 aa11.74□□□□□ -0.53
RFFL-211ENST00000584541 C14orf144Q96I85 54 aa11.74□□□□□ -0.53
RFFL-211ENST00000584541 DNAH11Q96DT5 4516 aa11.74□□□□□ -0.53
RFFL-211ENST00000584541 TIMM17BO60830 172 aa11.73□□□□□ -0.53
RFFL-211ENST00000584541 BOD1L2Q8IYS8 172 aa11.73□□□□□ -0.53
RFFL-211ENST00000584541 HECTD4Q9Y4D8 3996 aa11.72□□□□□ -0.53
RFFL-211ENST00000584541 DLEU1O43261 78 aa11.72□□□□□ -0.53
RFFL-211ENST00000584541 SLC25A34Q6PIV7 304 aa11.72□□□□□ -0.53
RFFL-211ENST00000584541 DPH3Q96FX2 82 aa11.72□□□□□ -0.53
RFFL-211ENST00000584541 TMEM238C9JI98 176 aa11.71□□□□□ -0.53
RFFL-211ENST00000584541 MIR7-3HGQ8N6C7 128 aa11.71□□□□□ -0.53
RFFL-211ENST00000584541 CHTF8P0CG12 524 aa11.7□□□□□ -0.54
RFFL-211ENST00000584541 C12orf57Q99622 126 aa11.69□□□□□ -0.54
RFFL-211ENST00000584541 SND1-IT1Q9HBX3 110 aa11.69□□□□□ -0.54
RFFL-211ENST00000584541 XAGE1AQ9HD64 81 aa11.69□□□□□ -0.54
RFFL-211ENST00000584541 SPACA4Q8TDM5 124 aa11.68□□□□□ -0.54
RFFL-211ENST00000584541 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.68□□□□□ -0.54
RFFL-211ENST00000584541 PCLOQ9Y6V0 5065 aa11.68□□□□□ -0.54
RFFL-211ENST00000584541 DAND5Q8N907 189 aa11.67□□□□□ -0.54
RFFL-211ENST00000584541 MIEN1Q9BRT3 115 aa11.67□□□□□ -0.54
RFFL-211ENST00000584541 C9orf129Q5T035 196 aaKnown RBP11.66□□□□□ -0.54
RFFL-211ENST00000584541 ADAMTSL4-AS1Q5T5F5 129 aa11.66□□□□□ -0.54
RFFL-211ENST00000584541 Q6ZSA8 131 aa11.66□□□□□ -0.54
RFFL-211ENST00000584541 LITAFQ99732 161 aa11.66□□□□□ -0.54
RFFL-211ENST00000584541 TP73-AS1Q9UF72 201 aa11.66□□□□□ -0.54
RFFL-211ENST00000584541 Q6ZVH6 145 aa11.65□□□□□ -0.54
RFFL-211ENST00000584541 COPS9Q8WXC6 57 aa11.65□□□□□ -0.54
RFFL-211ENST00000584541 SPANXDQ9BXN6 97 aa11.65□□□□□ -0.54
RFFL-211ENST00000584541 SPANXCQ9NY87 97 aa11.65□□□□□ -0.54
RFFL-211ENST00000584541 FAM30AQ9NZY2 134 aa11.65□□□□□ -0.54
RFFL-211ENST00000584541 UQCR10Q9UDW1 63 aa11.65□□□□□ -0.54
RFFL-211ENST00000584541 PANO1I0J062 215 aa11.64□□□□□ -0.55
RFFL-211ENST00000584541 SRSF9Q13242 221 aaKnown RBP eCLIP11.64□□□□□ -0.55
RFFL-211ENST00000584541 DNAH5Q8TE73 4624 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms