RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 LINC00173Q6ZV60 143 aa6.21□□□□□ -1.42
SKA2-208ENST00000583927 TIMM17AQ99595 171 aa6.21□□□□□ -1.42
SKA2-208ENST00000583927 RPS10P5Q9NQ39 176 aa6.21□□□□□ -1.42
SKA2-208ENST00000583927 TSTD3H0UI37 97 aa6.2□□□□□ -1.42
SKA2-208ENST00000583927 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.2□□□□□ -1.42
SKA2-208ENST00000583927 NDUFA1O15239 70 aa6.2□□□□□ -1.42
SKA2-208ENST00000583927 KIAA0087Q14695 138 aa6.2□□□□□ -1.42
SKA2-208ENST00000583927 ORAOV1Q8WV07 137 aa6.2□□□□□ -1.42
SKA2-208ENST00000583927 TOMM6Q96B49 74 aa6.2□□□□□ -1.42
SKA2-208ENST00000583927 VCX2Q9H322 139 aa6.2□□□□□ -1.42
SKA2-208ENST00000583927 SEC11AP67812 179 aa6.19□□□□□ -1.42
SKA2-208ENST00000583927 KIAA1644Q3SXP7 199 aa6.19□□□□□ -1.42
SKA2-208ENST00000583927 HIST3H2BBQ8N257 126 aa6.19□□□□□ -1.42
SKA2-208ENST00000583927 ALKBH7Q9BT30 221 aaPredicted RBP6.19□□□□□ -1.42
SKA2-208ENST00000583927 TRBV30A0A0K0K1B3 111 aa6.18□□□□□ -1.42
SKA2-208ENST00000583927 ERASQ7Z444 233 aa6.18□□□□□ -1.42
SKA2-208ENST00000583927 CBY1Q9Y3M2 126 aa6.18□□□□□ -1.42
SKA2-208ENST00000583927 HERVK_113P63121 156 aa6.17□□□□□ -1.42
SKA2-208ENST00000583927 PRR3P79522 188 aaKnown RBP6.17□□□□□ -1.42
SKA2-208ENST00000583927 GAGE2BQ13066 116 aa6.17□□□□□ -1.42
SKA2-208ENST00000583927 JOSD1Q15040 202 aaPredicted RBP6.17□□□□□ -1.42
SKA2-208ENST00000583927 A0A1W2PNN7 141 aa6.16□□□□□ -1.42
SKA2-208ENST00000583927 ODF1Q14990 250 aa6.16□□□□□ -1.42
SKA2-208ENST00000583927 COA6Q5JTJ3 125 aaKnown RBP6.16□□□□□ -1.42
SKA2-208ENST00000583927 C10orf25Q5T742 122 aa6.16□□□□□ -1.42
SKA2-208ENST00000583927 UNQ6190/PRO20217Q6UXQ8 127 aa6.16□□□□□ -1.42
SKA2-208ENST00000583927 Q6ZRP5 223 aa6.16□□□□□ -1.42
SKA2-208ENST00000583927 MRPL18Q9H0U6 180 aaKnown RBP6.16□□□□□ -1.42
SKA2-208ENST00000583927 HIST1H2BKO60814 126 aa6.15□□□□□ -1.42
SKA2-208ENST00000583927 HIST1H2BJP06899 126 aa6.15□□□□□ -1.42
SKA2-208ENST00000583927 LINC00614P0C842 121 aa6.15□□□□□ -1.42
SKA2-208ENST00000583927 HIST1H2BOP23527 126 aa6.15□□□□□ -1.42
SKA2-208ENST00000583927 HIST1H2BBP33778 126 aa6.15□□□□□ -1.42
SKA2-208ENST00000583927 HIST1H2BDP58876 126 aa6.15□□□□□ -1.42
SKA2-208ENST00000583927 HIST1H2BCP62807 126 aa6.15□□□□□ -1.42
SKA2-208ENST00000583927 RPL18AQ02543 176 aaKnown RBP6.15□□□□□ -1.42
SKA2-208ENST00000583927 HIST2H2BEQ16778 126 aa6.15□□□□□ -1.42
SKA2-208ENST00000583927 C9orf116Q5BN46 136 aaPredicted RBP6.15□□□□□ -1.42
SKA2-208ENST00000583927 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.15□□□□□ -1.42
SKA2-208ENST00000583927 ZC2HC1BQ5TFG8 222 aa6.15□□□□□ -1.42
SKA2-208ENST00000583927 SERTAD4-AS1Q5TG53 156 aa6.15□□□□□ -1.42
SKA2-208ENST00000583927 Q8IZM0 81 aa6.15□□□□□ -1.42
SKA2-208ENST00000583927 HIST1H2BHQ93079 126 aa6.15□□□□□ -1.42
SKA2-208ENST00000583927 SCGB3A1Q96QR1 104 aa6.15□□□□□ -1.42
SKA2-208ENST00000583927 HIST1H2BNQ99877 126 aa6.15□□□□□ -1.42
SKA2-208ENST00000583927 HIST1H2BMQ99879 126 aa6.15□□□□□ -1.42
SKA2-208ENST00000583927 C6orf48Q9UBA6 75 aa6.15□□□□□ -1.42
SKA2-208ENST00000583927 IGLV5-45A0A087WSX0 123 aa6.14□□□□□ -1.43
SKA2-208ENST00000583927 A0A0J9YXV3 536 aa6.14□□□□□ -1.43
SKA2-208ENST00000583927 TINCRA0A1B0GVN0 87 aa6.14□□□□□ -1.43
SKA2-208ENST00000583927 NDUFC2-KCTD14E9PQ53 114 aa6.14□□□□□ -1.43
SKA2-208ENST00000583927 MT1HL1P0DM35 61 aa6.14□□□□□ -1.43
SKA2-208ENST00000583927 NDUFA6P56556 154 aa6.14□□□□□ -1.43
SKA2-208ENST00000583927 SRSF9Q13242 221 aaKnown RBP eCLIP6.14□□□□□ -1.43
SKA2-208ENST00000583927 SPINK6Q6UWN8 80 aa6.14□□□□□ -1.43
SKA2-208ENST00000583927 CDKN2A-AS1Q9UH64 79 aa6.14□□□□□ -1.43
SKA2-208ENST00000583927 FA2HQ7L5A8 372 aa6.13□□□□□ -1.43
SKA2-208ENST00000583927 PACRGQ96M98 296 aaPredicted RBP6.13□□□□□ -1.43
SKA2-208ENST00000583927 GEMIN7Q9H840 131 aaKnown RBP6.13□□□□□ -1.43
SKA2-208ENST00000583927 PRSS2P07478 247 aa6.12□□□□□ -1.43
SKA2-208ENST00000583927 CXCL5P42830 114 aa6.12□□□□□ -1.43
SKA2-208ENST00000583927 C4orf48Q5BLP8 95 aa6.12□□□□□ -1.43
SKA2-208ENST00000583927 C6orf226Q5I0X4 101 aa6.12□□□□□ -1.43
SKA2-208ENST00000583927 C18orf32Q8TCD1 76 aa6.12□□□□□ -1.43
SKA2-208ENST00000583927 HIST1H2BLQ99880 126 aa6.12□□□□□ -1.43
SKA2-208ENST00000583927 CST9LQ9H4G1 147 aa6.12□□□□□ -1.43
SKA2-208ENST00000583927 TRAPPC1Q9Y5R8 145 aa6.12□□□□□ -1.43
SKA2-208ENST00000583927 DLEU1O43261 78 aa6.11□□□□□ -1.43
SKA2-208ENST00000583927 CKS1BP61024 79 aa6.11□□□□□ -1.43
SKA2-208ENST00000583927 PMVKQ15126 192 aa6.11□□□□□ -1.43
SKA2-208ENST00000583927 PDZD11Q5EBL8 140 aa6.11□□□□□ -1.43
SKA2-208ENST00000583927 C2orf82Q6UX34 121 aa6.11□□□□□ -1.43
SKA2-208ENST00000583927 LINC01600Q96MT4 127 aa6.11□□□□□ -1.43
SKA2-208ENST00000583927 HMCN2Q8NDA2 5059 aa6.1□□□□□ -1.43
SKA2-208ENST00000583927 A0A096LNJ9 63 aa6.1□□□□□ -1.43
SKA2-208ENST00000583927 SMIM1B2RUZ4 78 aa6.1□□□□□ -1.43
SKA2-208ENST00000583927 F8VRH5 84 aa6.1□□□□□ -1.43
SKA2-208ENST00000583927 URB1-AS1Q96HZ7 61 aa6.1□□□□□ -1.43
SKA2-208ENST00000583927 PSORS1C2Q9UIG4 136 aa6.1□□□□□ -1.43
SKA2-208ENST00000583927 M0R143 59 aa6.09□□□□□ -1.43
SKA2-208ENST00000583927 TRGC2P03986 189 aa6.09□□□□□ -1.43
SKA2-208ENST00000583927 GAGE2EQ4V326 116 aa6.09□□□□□ -1.43
SKA2-208ENST00000583927 REG3GQ6UW15 175 aa6.09□□□□□ -1.43
SKA2-208ENST00000583927 PHF5AQ7RTV0 110 aaKnown RBP6.09□□□□□ -1.43
SKA2-208ENST00000583927 SNHG12Q9BXW3 62 aa6.09□□□□□ -1.43
SKA2-208ENST00000583927 PRO1933Q9H354 126 aa6.09□□□□□ -1.43
SKA2-208ENST00000583927 TOMM7Q9P0U1 55 aa6.09□□□□□ -1.43
SKA2-208ENST00000583927 GAGE2DQ9UEU5 116 aa6.09□□□□□ -1.43
SKA2-208ENST00000583927 FAM168BA1KXE4 195 aa6.08□□□□□ -1.44
SKA2-208ENST00000583927 HBDP02042 147 aa6.08□□□□□ -1.44
SKA2-208ENST00000583927 IGLC3P0DOY3 106 aa6.08□□□□□ -1.44
SKA2-208ENST00000583927 FABP4P15090 132 aa6.08□□□□□ -1.44
SKA2-208ENST00000583927 C9orf129Q5T035 196 aaKnown RBP6.08□□□□□ -1.44
SKA2-208ENST00000583927 KRTAP7-1Q8IUC3 87 aa6.08□□□□□ -1.44
SKA2-208ENST00000583927 H3BRM9 83 aa6.07□□□□□ -1.44
SKA2-208ENST00000583927 ATP5LO75964 103 aa6.07□□□□□ -1.44
SKA2-208ENST00000583927 PCP4P48539 62 aa6.07□□□□□ -1.44
SKA2-208ENST00000583927 COX7B2Q8TF08 81 aa6.07□□□□□ -1.44
SKA2-208ENST00000583927 IGLV5-39A0A0G2JS06 123 aa6.06□□□□□ -1.44
SKA2-208ENST00000583927 M0QXV9 152 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms