RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 Q6ZVH6 145 aa6.13□□□□□ -1.43
CASC3-209ENST00000583902 ORAOV1Q8WV07 137 aa6.13□□□□□ -1.43
CASC3-209ENST00000583902 HIGD1BQ9P298 99 aa6.13□□□□□ -1.43
CASC3-209ENST00000583902 NDUFA12Q9UI09 145 aa6.13□□□□□ -1.43
CASC3-209ENST00000583902 TRBV30A0A0K0K1B3 111 aa6.12□□□□□ -1.43
CASC3-209ENST00000583902 LCE6AA0A183 80 aa6.12□□□□□ -1.43
CASC3-209ENST00000583902 TIMM17BO60830 172 aa6.12□□□□□ -1.43
CASC3-209ENST00000583902 MIEN1Q9BRT3 115 aa6.12□□□□□ -1.43
CASC3-209ENST00000583902 KRTAP1-5Q9BYS1 174 aa6.12□□□□□ -1.43
CASC3-209ENST00000583902 A0A0J9YXY3 114 aa6.11□□□□□ -1.43
CASC3-209ENST00000583902 ZNF815PA8K554 130 aa6.11□□□□□ -1.43
CASC3-209ENST00000583902 SPAG11BQ08648 103 aa6.11□□□□□ -1.43
CASC3-209ENST00000583902 KIAA0087Q14695 138 aa6.11□□□□□ -1.43
CASC3-209ENST00000583902 RNF151Q2KHN1 245 aa6.11□□□□□ -1.43
CASC3-209ENST00000583902 MAJINQ3KP22 176 aa6.11□□□□□ -1.43
CASC3-209ENST00000583902 NTN5Q8WTR8 489 aaPredicted RBP6.11□□□□□ -1.43
CASC3-209ENST00000583902 ZNF625Q96I27 306 aaPredicted RBP6.11□□□□□ -1.43
CASC3-209ENST00000583902 PPDPFQ9H3Y8 114 aa6.11□□□□□ -1.43
CASC3-209ENST00000583902 CSMD3Q7Z407 3707 aa6.11□□□□□ -1.43
CASC3-209ENST00000583902 IGKV2D-26A0A0A0MRZ7 120 aa6.1□□□□□ -1.43
CASC3-209ENST00000583902 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.1□□□□□ -1.43
CASC3-209ENST00000583902 TMEM238C9JI98 176 aa6.1□□□□□ -1.43
CASC3-209ENST00000583902 SCGB1D4Q6XE38 83 aa6.1□□□□□ -1.43
CASC3-209ENST00000583902 Q6ZRN7 208 aaPredicted RBP6.1□□□□□ -1.43
CASC3-209ENST00000583902 KRTAP4-12Q9BQ66 201 aa6.1□□□□□ -1.43
CASC3-209ENST00000583902 USP17L23D6RBM5 183 aa6.09□□□□□ -1.43
CASC3-209ENST00000583902 TAL2Q16559 108 aa6.09□□□□□ -1.43
CASC3-209ENST00000583902 C15orf56Q8N910 161 aa6.09□□□□□ -1.43
CASC3-209ENST00000583902 TOMM7Q9P0U1 55 aa6.09□□□□□ -1.43
CASC3-209ENST00000583902 DNAH7Q8WXX0 4024 aa6.09□□□□□ -1.43
CASC3-209ENST00000583902 IFITM1P13164 125 aa6.08□□□□□ -1.44
CASC3-209ENST00000583902 PTTG1IPP53801 180 aa6.08□□□□□ -1.44
CASC3-209ENST00000583902 CNBPP62633 177 aaKnown RBP6.08□□□□□ -1.44
CASC3-209ENST00000583902 PCP2Q8IVA1 136 aa6.08□□□□□ -1.44
CASC3-209ENST00000583902 C14orf144Q96I85 54 aa6.08□□□□□ -1.44
CASC3-209ENST00000583902 CAMK2N2Q96S95 79 aa6.08□□□□□ -1.44
CASC3-209ENST00000583902 SPANXB1Q9NS25 103 aaPredicted RBP6.08□□□□□ -1.44
CASC3-209ENST00000583902 SYCNQ0VAF6 134 aa6.07□□□□□ -1.44
CASC3-209ENST00000583902 LCE3BQ5TA77 95 aa6.07□□□□□ -1.44
CASC3-209ENST00000583902 DYNC2H1Q8NCM8 4307 aaKnown RBP6.06□□□□□ -1.44
CASC3-209ENST00000583902 LRCOL1A6NCL2 159 aa6.06□□□□□ -1.44
CASC3-209ENST00000583902 M0R2N4 97 aa6.06□□□□□ -1.44
CASC3-209ENST00000583902 TLX1NBP0CAT3 122 aa6.06□□□□□ -1.44
CASC3-209ENST00000583902 HNRNPA3P51991 378 aaKnown RBP6.06□□□□□ -1.44
CASC3-209ENST00000583902 TSPEAR-AS2P59090 65 aa6.06□□□□□ -1.44
CASC3-209ENST00000583902 LINC00336Q6ZUF6 198 aa6.06□□□□□ -1.44
CASC3-209ENST00000583902 MAPKAPK5-AS1Q8N8E1 139 aa6.06□□□□□ -1.44
CASC3-209ENST00000583902 TP73-AS1Q9UF72 201 aa6.06□□□□□ -1.44
CASC3-209ENST00000583902 DDTP30046 118 aa6.05□□□□□ -1.44
CASC3-209ENST00000583902 MEIG1Q5JSS6 88 aa6.05□□□□□ -1.44
CASC3-209ENST00000583902 CARD19Q96LW7 228 aa6.05□□□□□ -1.44
CASC3-209ENST00000583902 SPANXDQ9BXN6 97 aa6.05□□□□□ -1.44
CASC3-209ENST00000583902 SPANXCQ9NY87 97 aa6.05□□□□□ -1.44
CASC3-209ENST00000583902 ERG28Q9UKR5 140 aa6.05□□□□□ -1.44
CASC3-209ENST00000583902 A0A087WTM6 91 aa6.04□□□□□ -1.44
CASC3-209ENST00000583902 LOC107984156A0A0G2JMH3 177 aa6.04□□□□□ -1.44
CASC3-209ENST00000583902 M0R143 59 aa6.04□□□□□ -1.44
CASC3-209ENST00000583902 HSD52Q0P140 79 aa6.04□□□□□ -1.44
CASC3-209ENST00000583902 SRSF9Q13242 221 aaKnown RBP eCLIP6.04□□□□□ -1.44
CASC3-209ENST00000583902 ARL17AQ8IVW1 177 aa6.04□□□□□ -1.44
CASC3-209ENST00000583902 NDUFC2-KCTD14E9PQ53 114 aa6.03□□□□□ -1.44
CASC3-209ENST00000583902 RPL24P83731 157 aaKnown RBP6.03□□□□□ -1.44
CASC3-209ENST00000583902 HIGD2BQ4VC39 106 aa6.03□□□□□ -1.44
CASC3-209ENST00000583902 Q8N814 137 aa6.03□□□□□ -1.44
CASC3-209ENST00000583902 PRO1933Q9H354 126 aa6.03□□□□□ -1.44
CASC3-209ENST00000583902 LINC00474Q9P2X8 69 aa6.03□□□□□ -1.44
CASC3-209ENST00000583902 LINC00158P58513 81 aa6.02□□□□□ -1.45
CASC3-209ENST00000583902 C2orf82Q6UX34 121 aa6.02□□□□□ -1.45
CASC3-209ENST00000583902 UNQ6190/PRO20217Q6UXQ8 127 aa6.02□□□□□ -1.45
CASC3-209ENST00000583902 C2orf91Q6ZV80 131 aa6.02□□□□□ -1.45
CASC3-209ENST00000583902 HIST1H4GQ99525 98 aa6.02□□□□□ -1.45
CASC3-209ENST00000583902 C6orf48Q9UBA6 75 aa6.02□□□□□ -1.45
CASC3-209ENST00000583902 STARD9Q9P2P6 4700 aa6.01□□□□□ -1.45
CASC3-209ENST00000583902 LOC107984640A0A0U1RRK4 108 aa6.01□□□□□ -1.45
CASC3-209ENST00000583902 Q6ZRU5 148 aa6.01□□□□□ -1.45
CASC3-209ENST00000583902 KRTAP19-1Q8IUB9 90 aa6.01□□□□□ -1.45
CASC3-209ENST00000583902 C9orf163Q8N9P6 203 aa6.01□□□□□ -1.45
CASC3-209ENST00000583902 LITAFQ99732 161 aa6.01□□□□□ -1.45
CASC3-209ENST00000583902 TTTY13Q9BZ97 58 aa6.01□□□□□ -1.45
CASC3-209ENST00000583902 SMIM13P0DJ93 91 aa6□□□□□ -1.45
CASC3-209ENST00000583902 CEND1Q8N111 149 aa6□□□□□ -1.45
CASC3-209ENST00000583902 RTL8CO15255 209 aa5.99□□□□□ -1.45
CASC3-209ENST00000583902 NDUFC2O95298 119 aa5.99□□□□□ -1.45
CASC3-209ENST00000583902 PFN2P35080 140 aa5.99□□□□□ -1.45
CASC3-209ENST00000583902 C10orf25Q5T742 122 aa5.99□□□□□ -1.45
CASC3-209ENST00000583902 MIR7-3HGQ8N6C7 128 aa5.99□□□□□ -1.45
CASC3-209ENST00000583902 CBY1Q9Y3M2 126 aa5.99□□□□□ -1.45
CASC3-209ENST00000583902 A6NDN8 102 aa5.98□□□□□ -1.45
CASC3-209ENST00000583902 C16orf90A8MZG2 172 aa5.98□□□□□ -1.45
CASC3-209ENST00000583902 LECT2O14960 151 aa5.98□□□□□ -1.45
CASC3-209ENST00000583902 SLPIP03973 132 aa5.98□□□□□ -1.45
CASC3-209ENST00000583902 CTAG1AP78358 180 aa5.98□□□□□ -1.45
CASC3-209ENST00000583902 WFDC2Q14508 124 aa5.98□□□□□ -1.45
CASC3-209ENST00000583902 LINC00308Q8TCZ7 52 aa5.98□□□□□ -1.45
CASC3-209ENST00000583902 PLA2G2DQ9UNK4 145 aa5.98□□□□□ -1.45
CASC3-209ENST00000583902 LBHQ53QV2 105 aaPredicted RBP5.97□□□□□ -1.45
CASC3-209ENST00000583902 ADAMTSL4-AS1Q5T5F5 129 aa5.97□□□□□ -1.45
CASC3-209ENST00000583902 LINC00526Q96FQ7 95 aa5.97□□□□□ -1.45
CASC3-209ENST00000583902 SND1-IT1Q9HBX3 110 aa5.97□□□□□ -1.45
CASC3-209ENST00000583902 PLECQ15149 4684 aaKnown RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms