RNA–Protein interactions for RNA: ENST00000582980.1

CDH8-208, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 376 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-208ENST00000582980 PGPEP1Q9NXJ5 209 aa8.08□□□□□ -1.12
CDH8-208ENST00000582980 IGLV5-52A0A0A0MRZ9 124 aa8.07□□□□□ -1.12
CDH8-208ENST00000582980 LOC105371267A0A1B0GV96 52 aa8.07□□□□□ -1.12
CDH8-208ENST00000582980 NMUP48645 174 aa8.07□□□□□ -1.12
CDH8-208ENST00000582980 C2orf82Q6UX34 121 aa8.07□□□□□ -1.12
CDH8-208ENST00000582980 Q6ZRU5 148 aa8.07□□□□□ -1.12
CDH8-208ENST00000582980 VAMP8Q9BV40 100 aa8.07□□□□□ -1.12
CDH8-208ENST00000582980 PKIGQ9Y2B9 76 aa8.07□□□□□ -1.12
CDH8-208ENST00000582980 TRBV30A0A0K0K1B3 111 aa8.06□□□□□ -1.12
CDH8-208ENST00000582980 MYMXA0A1B0GTQ4 84 aa8.06□□□□□ -1.12
CDH8-208ENST00000582980 SLPIP03973 132 aa8.06□□□□□ -1.12
CDH8-208ENST00000582980 ANKRD39Q53RE8 183 aa8.06□□□□□ -1.12
CDH8-208ENST00000582980 UNQ6190/PRO20217Q6UXQ8 127 aa8.06□□□□□ -1.12
CDH8-208ENST00000582980 NDUFA12Q9UI09 145 aa8.06□□□□□ -1.12
CDH8-208ENST00000582980 TSPEAR-AS2P59090 65 aa8.05□□□□□ -1.12
CDH8-208ENST00000582980 HERV-K104P63124 156 aa8.05□□□□□ -1.12
CDH8-208ENST00000582980 RNF151Q2KHN1 245 aa8.05□□□□□ -1.12
CDH8-208ENST00000582980 MAJINQ3KP22 176 aa8.05□□□□□ -1.12
CDH8-208ENST00000582980 IGKV2D-26A0A0A0MRZ7 120 aa8.04□□□□□ -1.12
CDH8-208ENST00000582980 A0A1B0GVY2 172 aa8.04□□□□□ -1.12
CDH8-208ENST00000582980 SMIM6P0DI80 62 aa8.04□□□□□ -1.12
CDH8-208ENST00000582980 KRTAP10-2P60368 255 aa8.04□□□□□ -1.12
CDH8-208ENST00000582980 C10orf25Q5T742 122 aa8.04□□□□□ -1.12
CDH8-208ENST00000582980 C9orf163Q8N9P6 203 aa8.04□□□□□ -1.12
CDH8-208ENST00000582980 ZNF625Q96I27 306 aaPredicted RBP8.04□□□□□ -1.12
CDH8-208ENST00000582980 C6orf48Q9UBA6 75 aa8.04□□□□□ -1.12
CDH8-208ENST00000582980 PAM16Q9Y3D7 125 aa8.04□□□□□ -1.12
CDH8-208ENST00000582980 LINC00587B1AMM8 73 aa8.03□□□□□ -1.12
CDH8-208ENST00000582980 S100A12P80511 92 aa8.03□□□□□ -1.12
CDH8-208ENST00000582980 ZNF815PA8K554 130 aa8.02□□□□□ -1.13
CDH8-208ENST00000582980 SPATA45Q537H7 98 aa8.02□□□□□ -1.13
CDH8-208ENST00000582980 DNAH11Q96DT5 4516 aa8.01□□□□□ -1.13
CDH8-208ENST00000582980 LOC107984640A0A0U1RRK4 108 aa8.01□□□□□ -1.13
CDH8-208ENST00000582980 GCSHP23434 173 aa8.01□□□□□ -1.13
CDH8-208ENST00000582980 FUSP35637 526 aaKnown RBP eCLIP8.01□□□□□ -1.13
CDH8-208ENST00000582980 COX17Q14061 63 aa8.01□□□□□ -1.13
CDH8-208ENST00000582980 MEIG1Q5JSS6 88 aa8.01□□□□□ -1.13
CDH8-208ENST00000582980 ERG28Q9UKR5 140 aa8.01□□□□□ -1.13
CDH8-208ENST00000582980 NDUFC2-KCTD14E9PQ53 114 aa8□□□□□ -1.13
CDH8-208ENST00000582980 TLX1NBP0CAT3 122 aa8□□□□□ -1.13
CDH8-208ENST00000582980 PKD1P98161 4303 aa7.99□□□□□ -1.13
CDH8-208ENST00000582980 C16orf90A8MZG2 172 aa7.99□□□□□ -1.13
CDH8-208ENST00000582980 RPL18AQ02543 176 aaKnown RBP7.99□□□□□ -1.13
CDH8-208ENST00000582980 CIRBPQ14011 172 aaKnown RBP7.99□□□□□ -1.13
CDH8-208ENST00000582980 C9orf116Q5BN46 136 aaPredicted RBP7.99□□□□□ -1.13
CDH8-208ENST00000582980 PCP2Q8IVA1 136 aa7.99□□□□□ -1.13
CDH8-208ENST00000582980 TTTY13Q9BZ97 58 aa7.99□□□□□ -1.13
CDH8-208ENST00000582980 HECTD4Q9Y4D8 3996 aa7.99□□□□□ -1.13
CDH8-208ENST00000582980 A0A0J9YXY3 114 aa7.98□□□□□ -1.13
CDH8-208ENST00000582980 COX8AP10176 69 aa7.98□□□□□ -1.13
CDH8-208ENST00000582980 PFN2P35080 140 aa7.98□□□□□ -1.13
CDH8-208ENST00000582980 LINC00158P58513 81 aa7.98□□□□□ -1.13
CDH8-208ENST00000582980 LINC01620Q4KN68 170 aa7.98□□□□□ -1.13
CDH8-208ENST00000582980 SCGB1D4Q6XE38 83 aa7.98□□□□□ -1.13
CDH8-208ENST00000582980 SDIM1Q6ZPB5 146 aa7.98□□□□□ -1.13
CDH8-208ENST00000582980 LINC00474Q9P2X8 69 aa7.97□□□□□ -1.13
CDH8-208ENST00000582980 DLEU1O43261 78 aa7.96□□□□□ -1.14
CDH8-208ENST00000582980 TIMM17BO60830 172 aa7.96□□□□□ -1.14
CDH8-208ENST00000582980 SMIM13P0DJ93 91 aa7.96□□□□□ -1.14
CDH8-208ENST00000582980 GAGE2BQ13066 116 aa7.96□□□□□ -1.14
CDH8-208ENST00000582980 Q6ZRP5 223 aa7.96□□□□□ -1.14
CDH8-208ENST00000582980 BOD1L2Q8IYS8 172 aa7.96□□□□□ -1.14
CDH8-208ENST00000582980 DNAH5Q8TE73 4624 aa7.95□□□□□ -1.14
CDH8-208ENST00000582980 A0A096LNI7 61 aa7.95□□□□□ -1.14
CDH8-208ENST00000582980 A0A0U1RRA0 63 aa7.95□□□□□ -1.14
CDH8-208ENST00000582980 TMEM238C9JI98 176 aa7.95□□□□□ -1.14
CDH8-208ENST00000582980 PTTG1IPP53801 180 aa7.95□□□□□ -1.14
CDH8-208ENST00000582980 GAGE2EQ4V326 116 aa7.95□□□□□ -1.14
CDH8-208ENST00000582980 SLC25A34Q6PIV7 304 aa7.95□□□□□ -1.14
CDH8-208ENST00000582980 C14orf144Q96I85 54 aa7.95□□□□□ -1.14
CDH8-208ENST00000582980 GAGE2DQ9UEU5 116 aa7.95□□□□□ -1.14
CDH8-208ENST00000582980 PKHD1P08F94 4074 aa7.94□□□□□ -1.14
CDH8-208ENST00000582980 IGKV2-24A0A0C4DH68 120 aa7.94□□□□□ -1.14
CDH8-208ENST00000582980 MIR7-3HGQ8N6C7 128 aa7.94□□□□□ -1.14
CDH8-208ENST00000582980 C12orf57Q99622 126 aa7.94□□□□□ -1.14
CDH8-208ENST00000582980 KRTAP10-1P60331 282 aa7.93□□□□□ -1.14
CDH8-208ENST00000582980 CHTF8P0CG12 524 aa7.92□□□□□ -1.14
CDH8-208ENST00000582980 SPACA4Q8TDM5 124 aa7.92□□□□□ -1.14
CDH8-208ENST00000582980 MIEN1Q9BRT3 115 aa7.92□□□□□ -1.14
CDH8-208ENST00000582980 SND1-IT1Q9HBX3 110 aa7.92□□□□□ -1.14
CDH8-208ENST00000582980 XAGE1AQ9HD64 81 aa7.92□□□□□ -1.14
CDH8-208ENST00000582980 Q6ZVH6 145 aa7.91□□□□□ -1.14
CDH8-208ENST00000582980 COPS9Q8WXC6 57 aa7.91□□□□□ -1.14
CDH8-208ENST00000582980 DPH3Q96FX2 82 aa7.91□□□□□ -1.14
CDH8-208ENST00000582980 LITAFQ99732 161 aa7.91□□□□□ -1.14
CDH8-208ENST00000582980 SPANXDQ9BXN6 97 aa7.91□□□□□ -1.14
CDH8-208ENST00000582980 SPANXCQ9NY87 97 aa7.91□□□□□ -1.14
CDH8-208ENST00000582980 UQCR10Q9UDW1 63 aa7.91□□□□□ -1.14
CDH8-208ENST00000582980 ADAMTSL4-AS1Q5T5F5 129 aa7.9□□□□□ -1.14
CDH8-208ENST00000582980 Q6ZSA8 131 aa7.9□□□□□ -1.14
CDH8-208ENST00000582980 DAND5Q8N907 189 aa7.9□□□□□ -1.14
CDH8-208ENST00000582980 SPANXB1Q9NS25 103 aaPredicted RBP7.9□□□□□ -1.14
CDH8-208ENST00000582980 TP73-AS1Q9UF72 201 aa7.9□□□□□ -1.14
CDH8-208ENST00000582980 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.9□□□□□ -1.14
CDH8-208ENST00000582980 C9orf129Q5T035 196 aaKnown RBP7.89□□□□□ -1.15
CDH8-208ENST00000582980 LINC00518Q8N0U6 118 aa7.89□□□□□ -1.15
CDH8-208ENST00000582980 HIGD1BQ9P298 99 aa7.89□□□□□ -1.15
CDH8-208ENST00000582980 IFITM1P13164 125 aa7.88□□□□□ -1.15
CDH8-208ENST00000582980 RPL24P83731 157 aaKnown RBP7.88□□□□□ -1.15
CDH8-208ENST00000582980 SRSF9Q13242 221 aaKnown RBP eCLIP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms