RNA–Protein interactions for RNA: ENST00000582230.5

TOP3A-213, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-213ENST00000582230 C2orf82Q6UX34 121 aa12.86□□□□□ -0.35
TOP3A-213ENST00000582230 PET117Q6UWS5 81 aa12.85□□□□□ -0.35
TOP3A-213ENST00000582230 LOC107984640A0A0U1RRK4 108 aa12.84□□□□□ -0.35
TOP3A-213ENST00000582230 TMEM223A0PJW6 202 aa12.84□□□□□ -0.35
TOP3A-213ENST00000582230 S100A2P29034 98 aa12.84□□□□□ -0.35
TOP3A-213ENST00000582230 XGP55808 180 aa12.84□□□□□ -0.35
TOP3A-213ENST00000582230 HIST3H2BBQ8N257 126 aa12.84□□□□□ -0.35
TOP3A-213ENST00000582230 C6orf48Q9UBA6 75 aa12.84□□□□□ -0.35
TOP3A-213ENST00000582230 IGKCP01834 107 aa12.83□□□□□ -0.36
TOP3A-213ENST00000582230 LINC00474Q9P2X8 69 aa12.83□□□□□ -0.36
TOP3A-213ENST00000582230 C3orf79P0CE67 100 aa12.82□□□□□ -0.36
TOP3A-213ENST00000582230 CIRBPQ14011 172 aaKnown RBP12.82□□□□□ -0.36
TOP3A-213ENST00000582230 LINC01545Q5VT33 79 aa12.82□□□□□ -0.36
TOP3A-213ENST00000582230 PMCHL2Q9BQD1 86 aa12.82□□□□□ -0.36
TOP3A-213ENST00000582230 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.82□□□□□ -0.36
TOP3A-213ENST00000582230 DYNC1H1Q14204 4646 aaKnown RBP12.81□□□□□ -0.36
TOP3A-213ENST00000582230 KRTDAPP60985 99 aa12.81□□□□□ -0.36
TOP3A-213ENST00000582230 DNAH5Q8TE73 4624 aa12.8□□□□□ -0.36
TOP3A-213ENST00000582230 A0A096LNI7 61 aa12.8□□□□□ -0.36
TOP3A-213ENST00000582230 TLX1NBP0CAT3 122 aa12.8□□□□□ -0.36
TOP3A-213ENST00000582230 SPACA4Q8TDM5 124 aa12.8□□□□□ -0.36
TOP3A-213ENST00000582230 DPH3Q96FX2 82 aa12.8□□□□□ -0.36
TOP3A-213ENST00000582230 SNRPEP62304 92 aaKnown RBP12.79□□□□□ -0.36
TOP3A-213ENST00000582230 SFTA2Q6UW10 78 aa12.79□□□□□ -0.36
TOP3A-213ENST00000582230 HIST1H2BLQ99880 126 aa12.79□□□□□ -0.36
TOP3A-213ENST00000582230 IGKV2-24A0A0C4DH68 120 aa12.78□□□□□ -0.36
TOP3A-213ENST00000582230 PANO1I0J062 215 aa12.78□□□□□ -0.36
TOP3A-213ENST00000582230 CHTF8P0CG12 524 aa12.78□□□□□ -0.36
TOP3A-213ENST00000582230 PTTG1IPP53801 180 aa12.78□□□□□ -0.36
TOP3A-213ENST00000582230 HERVK_113P61574 105 aa12.78□□□□□ -0.36
TOP3A-213ENST00000582230 RPL18AQ02543 176 aaKnown RBP12.78□□□□□ -0.36
TOP3A-213ENST00000582230 GAGE2BQ13066 116 aa12.78□□□□□ -0.36
TOP3A-213ENST00000582230 SCXQ7RTU7 201 aa12.78□□□□□ -0.36
TOP3A-213ENST00000582230 LRP1BQ9NZR2 4599 aa12.78□□□□□ -0.36
TOP3A-213ENST00000582230 C20orf202A1L168 122 aa12.77□□□□□ -0.37
TOP3A-213ENST00000582230 C5orf52A6NGY3 159 aa12.77□□□□□ -0.37
TOP3A-213ENST00000582230 NDUFC2-KCTD14E9PQ53 114 aa12.77□□□□□ -0.37
TOP3A-213ENST00000582230 MAJINQ3KP22 176 aa12.77□□□□□ -0.37
TOP3A-213ENST00000582230 CIRBP-AS1Q8TBR5 109 aa12.77□□□□□ -0.37
TOP3A-213ENST00000582230 HAMPP81172 84 aa12.76□□□□□ -0.37
TOP3A-213ENST00000582230 C9orf116Q5BN46 136 aaPredicted RBP12.76□□□□□ -0.37
TOP3A-213ENST00000582230 AKR1D1P51857 326 aa12.74□□□□□ -0.37
TOP3A-213ENST00000582230 Q6ZRP5 223 aa12.74□□□□□ -0.37
TOP3A-213ENST00000582230 A0A087WYN8 130 aa12.73□□□□□ -0.37
TOP3A-213ENST00000582230 LEPROTO15243 131 aa12.73□□□□□ -0.37
TOP3A-213ENST00000582230 PLEKHB2Q96CS7 222 aa12.73□□□□□ -0.37
TOP3A-213ENST00000582230 ZNF625Q96I27 306 aaPredicted RBP12.73□□□□□ -0.37
TOP3A-213ENST00000582230 STPG4Q8N801 248 aa12.72□□□□□ -0.37
TOP3A-213ENST00000582230 PLAC8Q9NZF1 115 aa12.72□□□□□ -0.37
TOP3A-213ENST00000582230 GAGE2EQ4V326 116 aa12.71□□□□□ -0.37
TOP3A-213ENST00000582230 GAGE2DQ9UEU5 116 aa12.71□□□□□ -0.37
TOP3A-213ENST00000582230 E9PLD3 99 aa12.69□□□□□ -0.38
TOP3A-213ENST00000582230 HERV-K104P63124 156 aa12.69□□□□□ -0.38
TOP3A-213ENST00000582230 COX17Q14061 63 aa12.69□□□□□ -0.38
TOP3A-213ENST00000582230 NDUFA12Q9UI09 145 aa12.69□□□□□ -0.38
TOP3A-213ENST00000582230 MYMXA0A1B0GTQ4 84 aa12.68□□□□□ -0.38
TOP3A-213ENST00000582230 J3QQQ9 107 aa12.68□□□□□ -0.38
TOP3A-213ENST00000582230 Q8N1X5 172 aa12.68□□□□□ -0.38
TOP3A-213ENST00000582230 SMR3BP02814 79 aaPredicted RBP12.67□□□□□ -0.38
TOP3A-213ENST00000582230 LGALS3P17931 250 aaKnown RBP12.67□□□□□ -0.38
TOP3A-213ENST00000582230 NMUP48645 174 aa12.67□□□□□ -0.38
TOP3A-213ENST00000582230 ERG28Q9UKR5 140 aa12.67□□□□□ -0.38
TOP3A-213ENST00000582230 PFN2P35080 140 aa12.66□□□□□ -0.38
TOP3A-213ENST00000582230 TSPEAR-AS2P59090 65 aa12.66□□□□□ -0.38
TOP3A-213ENST00000582230 LINC00587B1AMM8 73 aa12.65□□□□□ -0.38
TOP3A-213ENST00000582230 EPM2AB3EWF7 344 aa12.65□□□□□ -0.38
TOP3A-213ENST00000582230 KIAA1109Q2LD37 5005 aa12.65□□□□□ -0.39
TOP3A-213ENST00000582230 A0A1W2PNN7 141 aa12.64□□□□□ -0.39
TOP3A-213ENST00000582230 FAM229AH3BQW9 127 aa12.64□□□□□ -0.39
TOP3A-213ENST00000582230 C9orf129Q5T035 196 aaKnown RBP12.64□□□□□ -0.39
TOP3A-213ENST00000582230 LINC00528Q8N1L1 170 aa12.63□□□□□ -0.39
TOP3A-213ENST00000582230 XAGE1AQ9HD64 81 aa12.63□□□□□ -0.39
TOP3A-213ENST00000582230 APOBP04114 4563 aaKnown RBP12.62□□□□□ -0.39
TOP3A-213ENST00000582230 ATOH7Q8N100 152 aa12.62□□□□□ -0.39
TOP3A-213ENST00000582230 TMA7Q9Y2S6 64 aaKnown RBP12.62□□□□□ -0.39
TOP3A-213ENST00000582230 LINC00158P58513 81 aa12.61□□□□□ -0.39
TOP3A-213ENST00000582230 MEIG1Q5JSS6 88 aa12.61□□□□□ -0.39
TOP3A-213ENST00000582230 C7orf33Q8WU49 177 aa12.6□□□□□ -0.39
TOP3A-213ENST00000582230 FAM168BA1KXE4 195 aa12.59□□□□□ -0.39
TOP3A-213ENST00000582230 Q5VSD8 79 aa12.59□□□□□ -0.39
TOP3A-213ENST00000582230 PCLOQ9Y6V0 5065 aa12.59□□□□□ -0.39
TOP3A-213ENST00000582230 DNAH8Q96JB1 4490 aa12.58□□□□□ -0.39
TOP3A-213ENST00000582230 SCGB1D1O95968 90 aa12.58□□□□□ -0.4
TOP3A-213ENST00000582230 PLA2G1BP04054 148 aaKnown RBP12.58□□□□□ -0.4
TOP3A-213ENST00000582230 SMIM13P0DJ93 91 aa12.58□□□□□ -0.4
TOP3A-213ENST00000582230 FAM19A5Q7Z5A7 132 aaPredicted RBP12.58□□□□□ -0.4
TOP3A-213ENST00000582230 SND1-IT1Q9HBX3 110 aa12.58□□□□□ -0.4
TOP3A-213ENST00000582230 RYR1P21817 5038 aa12.58□□□□□ -0.4
TOP3A-213ENST00000582230 IGKV2D-26A0A0A0MRZ7 120 aa12.57□□□□□ -0.4
TOP3A-213ENST00000582230 HSBP1L1C9JCN9 74 aa12.56□□□□□ -0.4
TOP3A-213ENST00000582230 PLA2G2DQ9UNK4 145 aa12.56□□□□□ -0.4
TOP3A-213ENST00000582230 HSPG2P98160 4391 aa12.55□□□□□ -0.4
TOP3A-213ENST00000582230 A0A0U1RRA0 63 aa12.55□□□□□ -0.4
TOP3A-213ENST00000582230 ANKRD39Q53RE8 183 aa12.55□□□□□ -0.4
TOP3A-213ENST00000582230 KRTAP7-1Q8IUC3 87 aa12.55□□□□□ -0.4
TOP3A-213ENST00000582230 HERC2O95714 4834 aa12.54□□□□□ -0.4
TOP3A-213ENST00000582230 M0QXV9 152 aa12.54□□□□□ -0.4
TOP3A-213ENST00000582230 A0A0J9YXY3 114 aa12.53□□□□□ -0.4
TOP3A-213ENST00000582230 ZNF815PA8K554 130 aa12.53□□□□□ -0.4
TOP3A-213ENST00000582230 RPL37AP61513 92 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms