RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 KRTAP13-3Q3SY46 172 aa4.35□□□□□ -1.71
CDK5RAP3-221ENST00000581662 CSDC2Q9Y534 153 aaKnown RBP4.35□□□□□ -1.71
CDK5RAP3-221ENST00000581662 GPR98Q8WXG9 6306 aa4.34□□□□□ -1.71
CDK5RAP3-221ENST00000581662 PPBPP02775 128 aa4.34□□□□□ -1.71
CDK5RAP3-221ENST00000581662 AMMECR1LQ6DCA0 310 aa4.34□□□□□ -1.71
CDK5RAP3-221ENST00000581662 TEX261Q6UWH6 196 aa4.34□□□□□ -1.71
CDK5RAP3-221ENST00000581662 UNQ6190/PRO20217Q6UXQ8 127 aa4.34□□□□□ -1.71
CDK5RAP3-221ENST00000581662 LINC00173Q6ZV60 143 aa4.34□□□□□ -1.71
CDK5RAP3-221ENST00000581662 FAM231DQ6ZW35 169 aa4.34□□□□□ -1.71
CDK5RAP3-221ENST00000581662 C5orf38Q86SI9 138 aa4.34□□□□□ -1.71
CDK5RAP3-221ENST00000581662 KRTAP13-1Q8IUC0 172 aa4.34□□□□□ -1.71
CDK5RAP3-221ENST00000581662 AMN1Q8IY45 258 aa4.34□□□□□ -1.71
CDK5RAP3-221ENST00000581662 SMDT1Q9H4I9 107 aa4.34□□□□□ -1.71
CDK5RAP3-221ENST00000581662 MRPL35Q9NZE8 188 aaKnown RBP4.34□□□□□ -1.71
CDK5RAP3-221ENST00000581662 A0A1B0GV72 72 aa4.33□□□□□ -1.72
CDK5RAP3-221ENST00000581662 TMEM238C9JI98 176 aa4.33□□□□□ -1.72
CDK5RAP3-221ENST00000581662 DLEU1O43261 78 aa4.33□□□□□ -1.72
CDK5RAP3-221ENST00000581662 SCGB1A1P11684 91 aa4.33□□□□□ -1.72
CDK5RAP3-221ENST00000581662 RPL39P62891 51 aaKnown RBP4.33□□□□□ -1.72
CDK5RAP3-221ENST00000581662 RPL18AQ02543 176 aaKnown RBP4.33□□□□□ -1.72
CDK5RAP3-221ENST00000581662 SPAG11BQ08648 103 aa4.33□□□□□ -1.72
CDK5RAP3-221ENST00000581662 FAM19A5Q7Z5A7 132 aaPredicted RBP4.33□□□□□ -1.72
CDK5RAP3-221ENST00000581662 C14orf144Q96I85 54 aa4.33□□□□□ -1.72
CDK5RAP3-221ENST00000581662 CAMK2N2Q96S95 79 aa4.33□□□□□ -1.72
CDK5RAP3-221ENST00000581662 C7orf77A4D0Y5 90 aa4.32□□□□□ -1.72
CDK5RAP3-221ENST00000581662 TEX46H3BTG2 121 aa4.32□□□□□ -1.72
CDK5RAP3-221ENST00000581662 COX7A2LO14548 114 aa4.32□□□□□ -1.72
CDK5RAP3-221ENST00000581662 TAGLN2P37802 199 aaKnown RBP4.32□□□□□ -1.72
CDK5RAP3-221ENST00000581662 MRAP2Q96G30 205 aa4.32□□□□□ -1.72
CDK5RAP3-221ENST00000581662 TMEM191AQ9H0A3 160 aa4.32□□□□□ -1.72
CDK5RAP3-221ENST00000581662 KMT2DO14686 5537 aa4.32□□□□□ -1.72
CDK5RAP3-221ENST00000581662 TRAV13-1A0A0B4J241 112 aa4.31□□□□□ -1.72
CDK5RAP3-221ENST00000581662 C5orf52A6NGY3 159 aa4.31□□□□□ -1.72
CDK5RAP3-221ENST00000581662 C1orf196B1AJZ1 125 aa4.31□□□□□ -1.72
CDK5RAP3-221ENST00000581662 M0QXV9 152 aa4.31□□□□□ -1.72
CDK5RAP3-221ENST00000581662 PDE6DO43924 150 aa4.31□□□□□ -1.72
CDK5RAP3-221ENST00000581662 SCO1O75880 301 aa4.31□□□□□ -1.72
CDK5RAP3-221ENST00000581662 SCGB1D1O95968 90 aa4.31□□□□□ -1.72
CDK5RAP3-221ENST00000581662 DDTP30046 118 aa4.31□□□□□ -1.72
CDK5RAP3-221ENST00000581662 EIF5AP63241 154 aaKnown RBP4.31□□□□□ -1.72
CDK5RAP3-221ENST00000581662 LINC00242Q5T6M2 205 aa4.31□□□□□ -1.72
CDK5RAP3-221ENST00000581662 UQCC3Q6UW78 93 aa4.31□□□□□ -1.72
CDK5RAP3-221ENST00000581662 C2orf82Q6UX34 121 aa4.31□□□□□ -1.72
CDK5RAP3-221ENST00000581662 TIMM21Q9BVV7 248 aa4.31□□□□□ -1.72
CDK5RAP3-221ENST00000581662 V9GYV3 84 aa4.31□□□□□ -1.72
CDK5RAP3-221ENST00000581662 CFC1P0CG37 223 aa4.3□□□□□ -1.72
CDK5RAP3-221ENST00000581662 PMCHP20382 165 aa4.3□□□□□ -1.72
CDK5RAP3-221ENST00000581662 S100A2P29034 98 aa4.3□□□□□ -1.72
CDK5RAP3-221ENST00000581662 SVBPQ8N300 66 aa4.3□□□□□ -1.72
CDK5RAP3-221ENST00000581662 LINC00337Q8N6G1 96 aa4.3□□□□□ -1.72
CDK5RAP3-221ENST00000581662 OR10D4PQ8NGN7 298 aa4.3□□□□□ -1.72
CDK5RAP3-221ENST00000581662 ST20Q9HBF5 79 aa4.3□□□□□ -1.72
CDK5RAP3-221ENST00000581662 ANAPC11Q9NYG5 84 aa4.3□□□□□ -1.72
CDK5RAP3-221ENST00000581662 PKIGQ9Y2B9 76 aa4.3□□□□□ -1.72
CDK5RAP3-221ENST00000581662 A0A087WZ39 114 aa4.29□□□□□ -1.72
CDK5RAP3-221ENST00000581662 HIGD1CA8MV81 97 aa4.29□□□□□ -1.72
CDK5RAP3-221ENST00000581662 MRPL51Q4U2R6 128 aaKnown RBP4.29□□□□□ -1.72
CDK5RAP3-221ENST00000581662 EIF5AL1Q6IS14 154 aaKnown RBP4.29□□□□□ -1.72
CDK5RAP3-221ENST00000581662 LINC01551Q86U37 167 aa4.29□□□□□ -1.72
CDK5RAP3-221ENST00000581662 ORAOV1Q8WV07 137 aa4.29□□□□□ -1.72
CDK5RAP3-221ENST00000581662 SPANXA1Q9NS26 97 aa4.29□□□□□ -1.72
CDK5RAP3-221ENST00000581662 TMEM218A2RU14 115 aa4.28□□□□□ -1.72
CDK5RAP3-221ENST00000581662 M0R143 59 aa4.28□□□□□ -1.72
CDK5RAP3-221ENST00000581662 ZNF861PO60384 105 aa4.28□□□□□ -1.72
CDK5RAP3-221ENST00000581662 RPL32P62910 135 aaKnown RBP4.28□□□□□ -1.72
CDK5RAP3-221ENST00000581662 ZC2HC1BQ5TFG8 222 aa4.28□□□□□ -1.72
CDK5RAP3-221ENST00000581662 TYMSOSQ8TAI1 123 aa4.28□□□□□ -1.72
CDK5RAP3-221ENST00000581662 ISOC2Q96AB3 205 aa4.28□□□□□ -1.72
CDK5RAP3-221ENST00000581662 IGLV4-3A0A075B6K6 122 aa4.27□□□□□ -1.73
CDK5RAP3-221ENST00000581662 TRBV24-1A0A075B6N3 115 aa4.27□□□□□ -1.73
CDK5RAP3-221ENST00000581662 A0A1B0GXF2 115 aa4.27□□□□□ -1.73
CDK5RAP3-221ENST00000581662 KANTRA0A1W2PQU2 76 aa4.27□□□□□ -1.73
CDK5RAP3-221ENST00000581662 C9JQL5 133 aa4.27□□□□□ -1.73
CDK5RAP3-221ENST00000581662 TMEM250H0YL14 139 aa4.27□□□□□ -1.73
CDK5RAP3-221ENST00000581662 NPYP01303 97 aa4.27□□□□□ -1.73
CDK5RAP3-221ENST00000581662 MRPS36P82909 103 aaKnown RBP4.27□□□□□ -1.73
CDK5RAP3-221ENST00000581662 KRTAP19-6Q3LI70 58 aa4.27□□□□□ -1.73
CDK5RAP3-221ENST00000581662 GAGE2EQ4V326 116 aa4.27□□□□□ -1.73
CDK5RAP3-221ENST00000581662 Q8NDZ9 215 aa4.27□□□□□ -1.73
CDK5RAP3-221ENST00000581662 TSKUQ8WUA8 353 aa4.27□□□□□ -1.73
CDK5RAP3-221ENST00000581662 TMEM101Q96IK0 257 aa4.27□□□□□ -1.73
CDK5RAP3-221ENST00000581662 BTF3L4Q96K17 158 aa4.27□□□□□ -1.73
CDK5RAP3-221ENST00000581662 PACRGQ96M98 296 aaPredicted RBP4.27□□□□□ -1.73
CDK5RAP3-221ENST00000581662 VCX2Q9H322 139 aa4.27□□□□□ -1.73
CDK5RAP3-221ENST00000581662 GAGE2DQ9UEU5 116 aa4.27□□□□□ -1.73
CDK5RAP3-221ENST00000581662 A0A1B0GUT8 65 aa4.26□□□□□ -1.73
CDK5RAP3-221ENST00000581662 FAM104BQ5XKR9 115 aa4.26□□□□□ -1.73
CDK5RAP3-221ENST00000581662 FP248Q71RG6 208 aaPredicted RBP4.26□□□□□ -1.73
CDK5RAP3-221ENST00000581662 SMIM2Q9BVW6 85 aa4.26□□□□□ -1.73
CDK5RAP3-221ENST00000581662 C20orf202A1L168 122 aa4.25□□□□□ -1.73
CDK5RAP3-221ENST00000581662 A8MWL6 223 aa4.25□□□□□ -1.73
CDK5RAP3-221ENST00000581662 NDUFC2-KCTD14E9PQ53 114 aa4.25□□□□□ -1.73
CDK5RAP3-221ENST00000581662 F8WDY8 70 aa4.25□□□□□ -1.73
CDK5RAP3-221ENST00000581662 K7ERU9 68 aa4.25□□□□□ -1.73
CDK5RAP3-221ENST00000581662 NDUFA1O15239 70 aa4.25□□□□□ -1.73
CDK5RAP3-221ENST00000581662 APOC3P02656 99 aa4.25□□□□□ -1.73
CDK5RAP3-221ENST00000581662 SRP19P09132 144 aaKnown RBP4.25□□□□□ -1.73
CDK5RAP3-221ENST00000581662 FAM19A3Q7Z5A8 133 aa4.25□□□□□ -1.73
CDK5RAP3-221ENST00000581662 LINC00304Q8N9R0 145 aa4.25□□□□□ -1.73
CDK5RAP3-221ENST00000581662 IMMP2LQ96T52 175 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 177.6 ms