RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 KRTDAPP60985 99 aa13.23□□□□□ -0.29
CCDC42-203ENST00000581598 IGHV1-58A0A0C4DH39 117 aa13.22□□□□□ -0.29
CCDC42-203ENST00000581598 SS18Q15532 418 aa13.22□□□□□ -0.29
CCDC42-203ENST00000581598 LINC00242Q5T6M2 205 aa13.22□□□□□ -0.29
CCDC42-203ENST00000581598 OR10D4PQ8NGN7 298 aa13.22□□□□□ -0.29
CCDC42-203ENST00000581598 IGLV4-69A0A075B6H9 119 aa13.21□□□□□ -0.29
CCDC42-203ENST00000581598 F8VRH5 84 aa13.21□□□□□ -0.29
CCDC42-203ENST00000581598 H0Y8G0 127 aa13.21□□□□□ -0.29
CCDC42-203ENST00000581598 IGLC3P0DOY3 106 aa13.21□□□□□ -0.29
CCDC42-203ENST00000581598 XCL1P47992 114 aa13.21□□□□□ -0.29
CCDC42-203ENST00000581598 LINC01545Q5VT33 79 aa13.21□□□□□ -0.29
CCDC42-203ENST00000581598 CHTOPQ9Y3Y2 248 aaKnown RBP13.21□□□□□ -0.29
CCDC42-203ENST00000581598 A0A0J9YXV3 536 aa13.2□□□□□ -0.3
CCDC42-203ENST00000581598 TINCRA0A1B0GVN0 87 aa13.2□□□□□ -0.3
CCDC42-203ENST00000581598 SEC11AP67812 179 aa13.2□□□□□ -0.3
CCDC42-203ENST00000581598 CD164L2Q6UWJ8 174 aa13.2□□□□□ -0.3
CCDC42-203ENST00000581598 MRPL35Q9NZE8 188 aaKnown RBP13.2□□□□□ -0.3
CCDC42-203ENST00000581598 PKIGQ9Y2B9 76 aa13.2□□□□□ -0.3
CCDC42-203ENST00000581598 C7orf33Q8WU49 177 aa13.19□□□□□ -0.3
CCDC42-203ENST00000581598 IGLV5-45A0A087WSX0 123 aa13.17□□□□□ -0.3
CCDC42-203ENST00000581598 IGHV3OR16-9A0A0B4J2B5 98 aa13.17□□□□□ -0.3
CCDC42-203ENST00000581598 MAJINQ3KP22 176 aa13.17□□□□□ -0.3
CCDC42-203ENST00000581598 LINC00474Q9P2X8 69 aa13.17□□□□□ -0.3
CCDC42-203ENST00000581598 IGKV2-24A0A0C4DH68 120 aa13.16□□□□□ -0.3
CCDC42-203ENST00000581598 C11orf86A6NJI1 115 aa13.16□□□□□ -0.3
CCDC42-203ENST00000581598 HERVK_113P63121 156 aa13.16□□□□□ -0.3
CCDC42-203ENST00000581598 A0A096LNI7 61 aa13.15□□□□□ -0.3
CCDC42-203ENST00000581598 C20orf202A1L168 122 aa13.15□□□□□ -0.3
CCDC42-203ENST00000581598 DPM2O94777 84 aa13.15□□□□□ -0.3
CCDC42-203ENST00000581598 MT1HL1P0DM35 61 aa13.15□□□□□ -0.3
CCDC42-203ENST00000581598 PLNP26678 52 aa13.15□□□□□ -0.3
CCDC42-203ENST00000581598 STPG4Q8N801 248 aa13.15□□□□□ -0.3
CCDC42-203ENST00000581598 PMCHL2Q9BQD1 86 aa13.15□□□□□ -0.3
CCDC42-203ENST00000581598 GEMIN7Q9H840 131 aaKnown RBP13.15□□□□□ -0.3
CCDC42-203ENST00000581598 ZNF22P17026 224 aaPredicted RBP13.14□□□□□ -0.31
CCDC42-203ENST00000581598 CARD19Q96LW7 228 aa13.14□□□□□ -0.31
CCDC42-203ENST00000581598 ZNF561-AS1K7EIQ3 104 aa13.13□□□□□ -0.31
CCDC42-203ENST00000581598 LOC105371267A0A1B0GV96 52 aa13.12□□□□□ -0.31
CCDC42-203ENST00000581598 IGKCP01834 107 aa13.12□□□□□ -0.31
CCDC42-203ENST00000581598 SYCNQ0VAF6 134 aa13.12□□□□□ -0.31
CCDC42-203ENST00000581598 LINC01561Q8N1V8 128 aa13.12□□□□□ -0.31
CCDC42-203ENST00000581598 LINC00526Q96FQ7 95 aa13.12□□□□□ -0.31
CCDC42-203ENST00000581598 CDKN2A-AS1Q9UH64 79 aa13.12□□□□□ -0.31
CCDC42-203ENST00000581598 A0A087WZ39 114 aa13.11□□□□□ -0.31
CCDC42-203ENST00000581598 AKR1D1P51857 326 aa13.11□□□□□ -0.31
CCDC42-203ENST00000581598 LINC00469Q8N7U9 141 aa13.11□□□□□ -0.31
CCDC42-203ENST00000581598 PLA2G2DQ9UNK4 145 aa13.11□□□□□ -0.31
CCDC42-203ENST00000581598 COX7A2LO14548 114 aa13.1□□□□□ -0.31
CCDC42-203ENST00000581598 JOSD1Q15040 202 aaPredicted RBP13.1□□□□□ -0.31
CCDC42-203ENST00000581598 PRR3P79522 188 aaKnown RBP13.09□□□□□ -0.31
CCDC42-203ENST00000581598 C5orf38Q86SI9 138 aa13.09□□□□□ -0.31
CCDC42-203ENST00000581598 MALP21145 153 aa13.08□□□□□ -0.32
CCDC42-203ENST00000581598 H3BRM9 83 aa13.07□□□□□ -0.32
CCDC42-203ENST00000581598 SCGB1D1O95968 90 aa13.07□□□□□ -0.32
CCDC42-203ENST00000581598 TMEM170BQ5T4T1 132 aa13.07□□□□□ -0.32
CCDC42-203ENST00000581598 TMEM223A0PJW6 202 aa13.06□□□□□ -0.32
CCDC42-203ENST00000581598 SMIM1B2RUZ4 78 aa13.06□□□□□ -0.32
CCDC42-203ENST00000581598 PYY3Q5JQD4 70 aa13.06□□□□□ -0.32
CCDC42-203ENST00000581598 C2orf48Q96LS8 159 aa13.06□□□□□ -0.32
CCDC42-203ENST00000581598 LOC107984640A0A0U1RRK4 108 aa13.05□□□□□ -0.32
CCDC42-203ENST00000581598 PTTG1IPP53801 180 aa13.05□□□□□ -0.32
CCDC42-203ENST00000581598 APOMO95445 188 aa13.04□□□□□ -0.32
CCDC42-203ENST00000581598 ATOH7Q8N100 152 aa13.04□□□□□ -0.32
CCDC42-203ENST00000581598 IGLV5-39A0A0G2JS06 123 aa13.03□□□□□ -0.32
CCDC42-203ENST00000581598 SPINK8P0C7L1 97 aa13.03□□□□□ -0.32
CCDC42-203ENST00000581598 CAMK2N2Q96S95 79 aa13.03□□□□□ -0.32
CCDC42-203ENST00000581598 LINC01600Q96MT4 127 aa13.01□□□□□ -0.33
CCDC42-203ENST00000581598 HERVK_113P61574 105 aa13□□□□□ -0.33
CCDC42-203ENST00000581598 RNF151Q2KHN1 245 aa13□□□□□ -0.33
CCDC42-203ENST00000581598 SPINK6Q6UWN8 80 aa13□□□□□ -0.33
CCDC42-203ENST00000581598 Q6ZRP5 223 aa13□□□□□ -0.33
CCDC42-203ENST00000581598 F8WDY8 70 aa12.99□□□□□ -0.33
CCDC42-203ENST00000581598 GAGE2BQ13066 116 aa12.99□□□□□ -0.33
CCDC42-203ENST00000581598 ORAOV1Q8WV07 137 aa12.99□□□□□ -0.33
CCDC42-203ENST00000581598 E9PLD3 99 aa12.98□□□□□ -0.33
CCDC42-203ENST00000581598 SPAG11BQ08648 103 aa12.98□□□□□ -0.33
CCDC42-203ENST00000581598 KIAA0087Q14695 138 aa12.98□□□□□ -0.33
CCDC42-203ENST00000581598 SRSF9Q13242 221 aaKnown RBP eCLIP12.97□□□□□ -0.33
CCDC42-203ENST00000581598 Q8IZM0 81 aa12.97□□□□□ -0.33
CCDC42-203ENST00000581598 LEPROTO15243 131 aa12.96□□□□□ -0.33
CCDC42-203ENST00000581598 ANKRD39Q53RE8 183 aa12.96□□□□□ -0.33
CCDC42-203ENST00000581598 A0A1W2PNN7 141 aa12.95□□□□□ -0.34
CCDC42-203ENST00000581598 SMIM6P0DI80 62 aa12.95□□□□□ -0.34
CCDC42-203ENST00000581598 COX7B2Q8TF08 81 aa12.95□□□□□ -0.34
CCDC42-203ENST00000581598 PLEKHB2Q96CS7 222 aa12.95□□□□□ -0.34
CCDC42-203ENST00000581598 TNXBP22105 4242 aa12.94□□□□□ -0.34
CCDC42-203ENST00000581598 HSBP1L1C9JCN9 74 aa12.94□□□□□ -0.34
CCDC42-203ENST00000581598 REG3GQ6UW15 175 aa12.94□□□□□ -0.34
CCDC42-203ENST00000581598 IGKV2D-26A0A0A0MRZ7 120 aa12.93□□□□□ -0.34
CCDC42-203ENST00000581598 TSPEAR-AS2P59090 65 aa12.93□□□□□ -0.34
CCDC42-203ENST00000581598 C9orf116Q5BN46 136 aaPredicted RBP12.93□□□□□ -0.34
CCDC42-203ENST00000581598 TOMM7Q9P0U1 55 aa12.93□□□□□ -0.34
CCDC42-203ENST00000581598 PRSS2P07478 247 aa12.92□□□□□ -0.34
CCDC42-203ENST00000581598 RPL18AQ02543 176 aaKnown RBP12.92□□□□□ -0.34
CCDC42-203ENST00000581598 VAMP8Q9BV40 100 aa12.92□□□□□ -0.34
CCDC42-203ENST00000581598 J3QQQ9 107 aa12.91□□□□□ -0.34
CCDC42-203ENST00000581598 NDUFA1O15239 70 aa12.91□□□□□ -0.34
CCDC42-203ENST00000581598 TLX1NBP0CAT3 122 aa12.9□□□□□ -0.34
CCDC42-203ENST00000581598 CXCL5P42830 114 aa12.9□□□□□ -0.34
CCDC42-203ENST00000581598 KRTAP10-8P60410 259 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms