RNA–Protein interactions for RNA: ENST00000581298.5

SNX11-208, Transcript of sorting nexin 11, humanhuman

TSL 5

Gene SNX11, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-208ENST00000581298 J3QR89 54 aa4.55□□□□□ -1.68
SNX11-208ENST00000581298 TNFRSF6BO95407 300 aa4.55□□□□□ -1.68
SNX11-208ENST00000581298 OXTP01178 125 aa4.55□□□□□ -1.68
SNX11-208ENST00000581298 MRPS36P82909 103 aaKnown RBP4.55□□□□□ -1.68
SNX11-208ENST00000581298 COA6Q5JTJ3 125 aaKnown RBP4.55□□□□□ -1.68
SNX11-208ENST00000581298 LAMTOR2Q9Y2Q5 125 aa4.55□□□□□ -1.68
SNX11-208ENST00000581298 A0A087WYN8 130 aa4.54□□□□□ -1.68
SNX11-208ENST00000581298 CKS2P33552 79 aa4.54□□□□□ -1.68
SNX11-208ENST00000581298 CAMPP49913 170 aa4.54□□□□□ -1.68
SNX11-208ENST00000581298 SS18Q15532 418 aa4.54□□□□□ -1.68
SNX11-208ENST00000581298 SMIM2Q9BVW6 85 aa4.54□□□□□ -1.68
SNX11-208ENST00000581298 PYGO1Q9Y3Y4 419 aa4.54□□□□□ -1.68
SNX11-208ENST00000581298 D6R8Y8 96 aa4.53□□□□□ -1.68
SNX11-208ENST00000581298 NPYP01303 97 aa4.53□□□□□ -1.68
SNX11-208ENST00000581298 FCER1GP30273 86 aa4.53□□□□□ -1.68
SNX11-208ENST00000581298 MRPL54Q6P161 138 aaKnown RBP4.53□□□□□ -1.68
SNX11-208ENST00000581298 TMEM136Q6ZRR5 245 aa4.53□□□□□ -1.68
SNX11-208ENST00000581298 GTF2H5Q6ZYL4 71 aa4.53□□□□□ -1.68
SNX11-208ENST00000581298 ORMDL3Q8N138 153 aa4.53□□□□□ -1.68
SNX11-208ENST00000581298 PRSS3P2Q8NHM4 247 aa4.53□□□□□ -1.68
SNX11-208ENST00000581298 C2orf48Q96LS8 159 aa4.53□□□□□ -1.68
SNX11-208ENST00000581298 YPEL4Q96NS1 127 aa4.53□□□□□ -1.68
SNX11-208ENST00000581298 IMMP2LQ96T52 175 aa4.53□□□□□ -1.68
SNX11-208ENST00000581298 VAMP8Q9BV40 100 aa4.53□□□□□ -1.68
SNX11-208ENST00000581298 UQCR10Q9UDW1 63 aa4.53□□□□□ -1.68
SNX11-208ENST00000581298 PKIGQ9Y2B9 76 aa4.53□□□□□ -1.68
SNX11-208ENST00000581298 IGHV3OR16-9A0A0B4J2B5 98 aa4.52□□□□□ -1.69
SNX11-208ENST00000581298 IGKV3OR2-268A0A0C4DH90 116 aa4.52□□□□□ -1.69
SNX11-208ENST00000581298 XCL1P47992 114 aa4.52□□□□□ -1.69
SNX11-208ENST00000581298 HNRNPA3P51991 378 aaKnown RBP4.52□□□□□ -1.69
SNX11-208ENST00000581298 RPL37AP61513 92 aaKnown RBP4.52□□□□□ -1.69
SNX11-208ENST00000581298 COX6A2Q02221 97 aa4.52□□□□□ -1.69
SNX11-208ENST00000581298 HIGD2BQ4VC39 106 aa4.52□□□□□ -1.69
SNX11-208ENST00000581298 PDZD11Q5EBL8 140 aa4.52□□□□□ -1.69
SNX11-208ENST00000581298 LINC00474Q9P2X8 69 aa4.52□□□□□ -1.69
SNX11-208ENST00000581298 TNXBP22105 4242 aa4.51□□□□□ -1.69
SNX11-208ENST00000581298 TRAV9-1A0A075B6T8 112 aa4.51□□□□□ -1.69
SNX11-208ENST00000581298 K7EMI3 77 aa4.51□□□□□ -1.69
SNX11-208ENST00000581298 COX7A2LO14548 114 aa4.51□□□□□ -1.69
SNX11-208ENST00000581298 CHTF8P0CG12 524 aa4.51□□□□□ -1.69
SNX11-208ENST00000581298 TEX43Q6ZNM6 134 aa4.51□□□□□ -1.69
SNX11-208ENST00000581298 Q6ZRU5 148 aa4.51□□□□□ -1.69
SNX11-208ENST00000581298 Q6ZUT4 128 aa4.51□□□□□ -1.69
SNX11-208ENST00000581298 FA2HQ7L5A8 372 aa4.51□□□□□ -1.69
SNX11-208ENST00000581298 LINC01561Q8N1V8 128 aa4.51□□□□□ -1.69
SNX11-208ENST00000581298 PRELID3AQ96N28 172 aa4.51□□□□□ -1.69
SNX11-208ENST00000581298 KRTAP4-2Q9BYR5 136 aa4.51□□□□□ -1.69
SNX11-208ENST00000581298 CTDSP1Q9GZU7 261 aa4.51□□□□□ -1.69
SNX11-208ENST00000581298 MRPL18Q9H0U6 180 aaKnown RBP4.51□□□□□ -1.69
SNX11-208ENST00000581298 RPL39P62891 51 aaKnown RBP4.5□□□□□ -1.69
SNX11-208ENST00000581298 SYCNQ0VAF6 134 aa4.5□□□□□ -1.69
SNX11-208ENST00000581298 FAM19A3Q7Z5A8 133 aa4.5□□□□□ -1.69
SNX11-208ENST00000581298 Q8N8P6 123 aa4.5□□□□□ -1.69
SNX11-208ENST00000581298 CARD19Q96LW7 228 aa4.5□□□□□ -1.69
SNX11-208ENST00000581298 SS18L2Q9UHA2 77 aa4.5□□□□□ -1.69
SNX11-208ENST00000581298 IGLV4-69A0A075B6H9 119 aa4.49□□□□□ -1.69
SNX11-208ENST00000581298 A0A096LNI7 61 aa4.49□□□□□ -1.69
SNX11-208ENST00000581298 TRAV13-1A0A0B4J241 112 aa4.49□□□□□ -1.69
SNX11-208ENST00000581298 ZNF561-AS1K7EIQ3 104 aa4.49□□□□□ -1.69
SNX11-208ENST00000581298 TRGC2P03986 189 aa4.49□□□□□ -1.69
SNX11-208ENST00000581298 RPL24P83731 157 aaKnown RBP4.49□□□□□ -1.69
SNX11-208ENST00000581298 AMELXQ99217 191 aa4.49□□□□□ -1.69
SNX11-208ENST00000581298 SPANXCQ9NY87 97 aa4.49□□□□□ -1.69
SNX11-208ENST00000581298 MRPL35Q9NZE8 188 aaKnown RBP4.49□□□□□ -1.69
SNX11-208ENST00000581298 IGLV4-3A0A075B6K6 122 aa4.48□□□□□ -1.69
SNX11-208ENST00000581298 A0A087WZ39 114 aa4.48□□□□□ -1.69
SNX11-208ENST00000581298 LOC107984640A0A0U1RRK4 108 aa4.48□□□□□ -1.69
SNX11-208ENST00000581298 LINC01546A6NGU7 62 aa4.48□□□□□ -1.69
SNX11-208ENST00000581298 IGIPA6NJ69 53 aa4.48□□□□□ -1.69
SNX11-208ENST00000581298 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.48□□□□□ -1.69
SNX11-208ENST00000581298 M0QXV9 152 aa4.48□□□□□ -1.69
SNX11-208ENST00000581298 APOMO95445 188 aa4.48□□□□□ -1.69
SNX11-208ENST00000581298 TLX1NBP0CAT3 122 aa4.48□□□□□ -1.69
SNX11-208ENST00000581298 MT1HL1P0DM35 61 aa4.48□□□□□ -1.69
SNX11-208ENST00000581298 KIAA0087Q14695 138 aa4.48□□□□□ -1.69
SNX11-208ENST00000581298 RNASE13Q5GAN3 156 aaKnown RBP4.48□□□□□ -1.69
SNX11-208ENST00000581298 LINC00242Q5T6M2 205 aa4.48□□□□□ -1.69
SNX11-208ENST00000581298 SMIM20Q8N5G0 67 aa4.48□□□□□ -1.69
SNX11-208ENST00000581298 STPG4Q8N801 248 aa4.48□□□□□ -1.69
SNX11-208ENST00000581298 HSPB8Q9UJY1 196 aa4.48□□□□□ -1.69
SNX11-208ENST00000581298 ERG28Q9UKR5 140 aa4.48□□□□□ -1.69
SNX11-208ENST00000581298 MALP21145 153 aa4.47□□□□□ -1.69
SNX11-208ENST00000581298 IFI27P40305 119 aaPredicted RBP4.47□□□□□ -1.69
SNX11-208ENST00000581298 HSD52Q0P140 79 aa4.47□□□□□ -1.69
SNX11-208ENST00000581298 SRSF9Q13242 221 aaKnown RBP eCLIP4.47□□□□□ -1.69
SNX11-208ENST00000581298 ORMDL2Q53FV1 153 aa4.47□□□□□ -1.69
SNX11-208ENST00000581298 Q6ZN92 141 aa4.47□□□□□ -1.69
SNX11-208ENST00000581298 C5orf38Q86SI9 138 aa4.47□□□□□ -1.69
SNX11-208ENST00000581298 LINC00526Q96FQ7 95 aa4.47□□□□□ -1.69
SNX11-208ENST00000581298 TMEM141Q96I45 108 aa4.47□□□□□ -1.69
SNX11-208ENST00000581298 OPRPNQ99935 248 aaPredicted RBP4.47□□□□□ -1.69
SNX11-208ENST00000581298 MAP1LC3AQ9H492 121 aa4.47□□□□□ -1.69
SNX11-208ENST00000581298 NXT2Q9NPJ8 142 aaKnown RBP4.47□□□□□ -1.69
SNX11-208ENST00000581298 LINC01549A6NIU2 74 aa4.46□□□□□ -1.7
SNX11-208ENST00000581298 UBE2D1P51668 147 aa4.46□□□□□ -1.7
SNX11-208ENST00000581298 PRR3P79522 188 aaKnown RBP4.46□□□□□ -1.7
SNX11-208ENST00000581298 C2orf66Q6UXQ4 117 aa4.46□□□□□ -1.7
SNX11-208ENST00000581298 LINC00173Q6ZV60 143 aa4.46□□□□□ -1.7
SNX11-208ENST00000581298 C7orf33Q8WU49 177 aa4.46□□□□□ -1.7
SNX11-208ENST00000581298 CAMK2N2Q96S95 79 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms